RNA–Protein interactions for RNA: ENST00000172853.14

NEB-201, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEB, Length 20,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-201ENST00000172853 HMGB1P09429 215 aaKnown RBP4.18□□□□□ -1.74
NEB-201ENST00000172853 CCDC27Q2M243 656 aa4.18□□□□□ -1.74
NEB-201ENST00000172853 TERF2IPQ9NYB0 399 aa4.18□□□□□ -1.74
NEB-201ENST00000172853 HIRIP3Q9BW71 556 aaPredicted RBP4.18□□□□□ -1.74
NEB-201ENST00000172853 PPP4R3AQ6IN85 833 aa4.18□□□□□ -1.74
NEB-201ENST00000172853 SSX2IPQ9Y2D8 614 aa4.18□□□□□ -1.74
NEB-201ENST00000172853 TEFQ10587 303 aa4.18□□□□□ -1.74
NEB-201ENST00000172853 NOC2LQ9Y3T9 749 aaKnown RBP4.18□□□□□ -1.74
NEB-201ENST00000172853 DDX58O95786 925 aaKnown RBP4.18□□□□□ -1.74
NEB-201ENST00000172853 RWDD1Q9H446 243 aaPredicted RBP4.18□□□□□ -1.74
NEB-201ENST00000172853 PSME1Q06323 249 aa4.18□□□□□ -1.74
NEB-201ENST00000172853 TTLL12Q14166 644 aaPredicted RBP4.18□□□□□ -1.74
NEB-201ENST00000172853 C11orf95C9JLR9 678 aaPredicted RBP4.18□□□□□ -1.74
NEB-201ENST00000172853 ZBTB24O43167 697 aaPredicted RBP4.18□□□□□ -1.74
NEB-201ENST00000172853 BCL11BQ9C0K0 894 aaPredicted RBP4.18□□□□□ -1.74
NEB-201ENST00000172853 ANKRD62A6NC57 917 aa4.18□□□□□ -1.74
NEB-201ENST00000172853 SAFB2Q14151 953 aaKnown RBP eCLIP4.18□□□□□ -1.74
NEB-201ENST00000172853 TNIP1Q15025 636 aa4.18□□□□□ -1.74
NEB-201ENST00000172853 LRSAM1Q6UWE0 723 aa4.18□□□□□ -1.74
NEB-201ENST00000172853 PPM1EQ8WY54 764 aa4.18□□□□□ -1.74
NEB-201ENST00000172853 IBSPP21815 317 aaPredicted RBP4.18□□□□□ -1.74
NEB-201ENST00000172853 RRP7BPQ9NSQ0 103 aa4.18□□□□□ -1.74
NEB-201ENST00000172853 STAMBPO95630 424 aa4.17□□□□□ -1.74
NEB-201ENST00000172853 ERC1Q8IUD2 1116 aa4.17□□□□□ -1.74
NEB-201ENST00000172853 BEGAINQ9BUH8 593 aa4.17□□□□□ -1.74
NEB-201ENST00000172853 ACBD3Q9H3P7 528 aa4.17□□□□□ -1.74
NEB-201ENST00000172853 TMOD2Q9NZR1 351 aa4.17□□□□□ -1.74
NEB-201ENST00000172853 RSPH4AQ5TD94 716 aa4.17□□□□□ -1.74
NEB-201ENST00000172853 ERLIN2O94905 339 aa4.17□□□□□ -1.74
NEB-201ENST00000172853 CENPJQ9HC77 1338 aaPredicted RBP4.17□□□□□ -1.74
NEB-201ENST00000172853 POTEJP0CG39 1038 aa4.17□□□□□ -1.74
NEB-201ENST00000172853 HSP90AA2PQ14568 343 aaPredicted RBP4.17□□□□□ -1.74
NEB-201ENST00000172853 ZNHIT6Q9NWK9 470 aaKnown RBP4.17□□□□□ -1.74
NEB-201ENST00000172853 CPLX1O14810 134 aa4.17□□□□□ -1.74
NEB-201ENST00000172853 SLU7O95391 586 aaKnown RBP4.17□□□□□ -1.74
NEB-201ENST00000172853 MATR3P43243 847 aaKnown RBP eCLIP4.17□□□□□ -1.74
NEB-201ENST00000172853 ZMYND15Q9H091 742 aa4.17□□□□□ -1.74
NEB-201ENST00000172853 RUFY2Q8WXA3 655 aa4.17□□□□□ -1.74
NEB-201ENST00000172853 BECN2A8MW95 431 aa4.17□□□□□ -1.74
NEB-201ENST00000172853 RGS3P49796 1198 aa4.17□□□□□ -1.74
NEB-201ENST00000172853 UQCRHP07919 91 aa4.17□□□□□ -1.74
NEB-201ENST00000172853 NOP58Q9Y2X3 529 aaKnown RBP4.17□□□□□ -1.74
NEB-201ENST00000172853 GBP2P32456 591 aaPredicted RBP4.17□□□□□ -1.74
NEB-201ENST00000172853 CDK5RAP3Q96JB5 506 aa4.17□□□□□ -1.74
NEB-201ENST00000172853 MYCNP04198 464 aaPredicted RBP4.17□□□□□ -1.74
NEB-201ENST00000172853 SSFA2P28290 1259 aa4.16□□□□□ -1.74
NEB-201ENST00000172853 CCAR2Q8N163 923 aaKnown RBP4.16□□□□□ -1.74
NEB-201ENST00000172853 EPB41L2O43491 1005 aaKnown RBP4.16□□□□□ -1.74
NEB-201ENST00000172853 LRRC45Q96CN5 670 aa4.16□□□□□ -1.74
NEB-201ENST00000172853 GNL3LQ9NVN8 582 aaKnown RBP4.16□□□□□ -1.74
NEB-201ENST00000172853 EIF4G1Q04637 1599 aaKnown RBP4.16□□□□□ -1.74
NEB-201ENST00000172853 RBM5P52756 815 aaKnown RBP eCLIP4.16□□□□□ -1.74
NEB-201ENST00000172853 KIF3BO15066 747 aa4.16□□□□□ -1.74
NEB-201ENST00000172853 SCLT1Q96NL6 688 aa4.16□□□□□ -1.74
NEB-201ENST00000172853 OSCARQ8IYS5 282 aa4.16□□□□□ -1.74
NEB-201ENST00000172853 FERMT2Q96AC1 680 aa4.16□□□□□ -1.74
NEB-201ENST00000172853 COMMD10Q9Y6G5 202 aa4.16□□□□□ -1.74
NEB-201ENST00000172853 FYB1O15117 783 aa4.16□□□□□ -1.74
NEB-201ENST00000172853 GOLGA6L3A6NEY3 463 aa4.16□□□□□ -1.74
NEB-201ENST00000172853 SLC4A10Q6U841 1118 aa4.16□□□□□ -1.74
NEB-201ENST00000172853 DDX23Q9BUQ8 820 aaKnown RBP4.16□□□□□ -1.74
NEB-201ENST00000172853 PRPF31Q8WWY3 499 aaKnown RBP4.16□□□□□ -1.74
NEB-201ENST00000172853 ATP6V1DQ9Y5K8 247 aa4.16□□□□□ -1.74
NEB-201ENST00000172853 BIRC2Q13490 618 aa4.16□□□□□ -1.74
NEB-201ENST00000172853 KIF6Q6ZMV9 814 aa4.16□□□□□ -1.74
NEB-201ENST00000172853 CAGE1Q8TC20 777 aa4.16□□□□□ -1.74
NEB-201ENST00000172853 KRT18P05783 430 aaKnown RBP4.16□□□□□ -1.74
NEB-201ENST00000172853 MFAP1P55081 439 aaKnown RBP4.16□□□□□ -1.74
NEB-201ENST00000172853 TRIM5Q9C035 493 aa4.16□□□□□ -1.74
NEB-201ENST00000172853 SLKQ9H2G2 1235 aaPredicted RBP4.16□□□□□ -1.74
NEB-201ENST00000172853 NGEFQ8N5V2 710 aa4.15□□□□□ -1.74
NEB-201ENST00000172853 ERCC4Q92889 916 aaPredicted RBP4.15□□□□□ -1.74
NEB-201ENST00000172853 PDE3BQ13370 1112 aa4.15□□□□□ -1.75
NEB-201ENST00000172853 NUTM2BA6NNL0 878 aaPredicted RBP4.15□□□□□ -1.75
NEB-201ENST00000172853 NUTM2EB1AL46 878 aaPredicted RBP4.15□□□□□ -1.75
NEB-201ENST00000172853 NUTM2DQ5VT03 806 aaPredicted RBP4.15□□□□□ -1.75
NEB-201ENST00000172853 NUTM2AQ8IVF1 878 aaPredicted RBP4.15□□□□□ -1.75
NEB-201ENST00000172853 MCTP1Q6DN14 999 aa4.15□□□□□ -1.75
NEB-201ENST00000172853 CYB5RLQ6IPT4 315 aa4.15□□□□□ -1.75
NEB-201ENST00000172853 UBE2Q2Q8WVN8 375 aa4.15□□□□□ -1.75
NEB-201ENST00000172853 MAP7D2Q96T17 732 aa4.15□□□□□ -1.75
NEB-201ENST00000172853 DEF6Q9H4E7 631 aa4.15□□□□□ -1.75
NEB-201ENST00000172853 C9orf78Q9NZ63 289 aaPredicted RBP4.15□□□□□ -1.75
NEB-201ENST00000172853 HMGB1P1B2RPK0 211 aaPredicted RBP4.15□□□□□ -1.75
NEB-201ENST00000172853 ANAPC15P60006 121 aa4.15□□□□□ -1.75
NEB-201ENST00000172853 DIAPH3Q9NSV4 1193 aa4.15□□□□□ -1.75
NEB-201ENST00000172853 TXLNAP40222 546 aa4.14□□□□□ -1.75
NEB-201ENST00000172853 TXLNBQ8N3L3 684 aa4.14□□□□□ -1.75
NEB-201ENST00000172853 RGS22Q8NE09 1264 aa4.14□□□□□ -1.75
NEB-201ENST00000172853 EIF3AQ14152 1382 aaKnown RBP4.14□□□□□ -1.75
NEB-201ENST00000172853 ST18O60284 1047 aa4.14□□□□□ -1.75
NEB-201ENST00000172853 CENPQQ7L2Z9 268 aaPredicted RBP4.14□□□□□ -1.75
NEB-201ENST00000172853 ZSCAN29Q8IWY8 852 aaPredicted RBP4.14□□□□□ -1.75
NEB-201ENST00000172853 STK11IPQ8N1F8 1099 aa4.14□□□□□ -1.75
NEB-201ENST00000172853 GIGYF2Q6Y7W6 1299 aaKnown RBP4.14□□□□□ -1.75
NEB-201ENST00000172853 PMFBP1Q8TBY8 1022 aa4.14□□□□□ -1.75
NEB-201ENST00000172853 CC2D1BQ5T0F9 858 aaKnown RBP4.14□□□□□ -1.75
NEB-201ENST00000172853 ITPRIPQ8IWB1 547 aa4.14□□□□□ -1.75
NEB-201ENST00000172853 U2AF1L5P0DN76 240 aaPredicted RBP4.14□□□□□ -1.75
NEB-201ENST00000172853 U2AF1Q01081 240 aaKnown RBP eCLIP4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms