RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 UPF2Q9HAU5 1272 aaKnown RBP15.65■□□□□ 0.1
CHPF2-201ENST00000035307 TTC37Q6PGP7 1564 aa15.65■□□□□ 0.1
CHPF2-201ENST00000035307 CABP1Q9NZU7 370 aa15.65■□□□□ 0.1
CHPF2-201ENST00000035307 KDM5BQ9UGL1 1544 aa15.65■□□□□ 0.1
CHPF2-201ENST00000035307 ELL2O00472 640 aaPredicted RBP15.65■□□□□ 0.1
CHPF2-201ENST00000035307 CNTLNQ9NXG0 1405 aa15.64■□□□□ 0.09
CHPF2-201ENST00000035307 XPCQ01831 940 aaPredicted RBP15.64■□□□□ 0.09
CHPF2-201ENST00000035307 CLUAP1Q96AJ1 413 aa15.64■□□□□ 0.09
CHPF2-201ENST00000035307 TERF2IPQ9NYB0 399 aa15.64■□□□□ 0.09
CHPF2-201ENST00000035307 MYBBP1AQ9BQG0 1328 aaKnown RBP15.64■□□□□ 0.09
CHPF2-201ENST00000035307 MBD5Q9P267 1494 aa15.64■□□□□ 0.09
CHPF2-201ENST00000035307 EXOC6Q8TAG9 804 aa15.64■□□□□ 0.09
CHPF2-201ENST00000035307 CDCA7LQ96GN5 454 aa15.64■□□□□ 0.09
CHPF2-201ENST00000035307 NOS1P29475 1434 aa15.64■□□□□ 0.09
CHPF2-201ENST00000035307 TCERG1O14776 1098 aaKnown RBP15.63■□□□□ 0.09
CHPF2-201ENST00000035307 SLC52A1Q9NWF4 448 aa15.62■□□□□ 0.09
CHPF2-201ENST00000035307 ADAMTS8Q9UP79 889 aa15.62■□□□□ 0.09
CHPF2-201ENST00000035307 ARHGEF12Q9NZN5 1544 aa15.62■□□□□ 0.09
CHPF2-201ENST00000035307 ITSN2Q9NZM3 1697 aa15.62■□□□□ 0.09
CHPF2-201ENST00000035307 FAM135AQ9P2D6 1515 aa15.62■□□□□ 0.09
CHPF2-201ENST00000035307 FTSJ3Q8IY81 847 aaKnown RBP15.62■□□□□ 0.09
CHPF2-201ENST00000035307 DNMT1P26358 1616 aaKnown RBP15.62■□□□□ 0.09
CHPF2-201ENST00000035307 A2MP01023 1474 aa15.62■□□□□ 0.09
CHPF2-201ENST00000035307 YEATS2Q9ULM3 1422 aa15.62■□□□□ 0.09
CHPF2-201ENST00000035307 LRRIQ1Q96JM4 1722 aa15.61■□□□□ 0.09
CHPF2-201ENST00000035307 HMOX1P09601 288 aa15.61■□□□□ 0.09
CHPF2-201ENST00000035307 SPRYD3Q8NCJ5 442 aa15.6■□□□□ 0.09
CHPF2-201ENST00000035307 CDK19Q9BWU1 502 aa15.6■□□□□ 0.09
CHPF2-201ENST00000035307 MTHFSP49914 203 aa15.6■□□□□ 0.09
CHPF2-201ENST00000035307 DISP3Q9P2K9 1392 aa15.59■□□□□ 0.09
CHPF2-201ENST00000035307 EIF5BO60841 1220 aaKnown RBP15.59■□□□□ 0.09
CHPF2-201ENST00000035307 NCKAP5LQ9HCH0 1330 aa15.59■□□□□ 0.09
CHPF2-201ENST00000035307 TSPOAP1O95153 1857 aa15.59■□□□□ 0.09
CHPF2-201ENST00000035307 SAMD9LQ8IVG5 1584 aa15.57■□□□□ 0.08
CHPF2-201ENST00000035307 ZBED9Q6R2W3 1325 aa15.57■□□□□ 0.08
CHPF2-201ENST00000035307 ZNF518AQ6AHZ1 1483 aa15.56■□□□□ 0.08
CHPF2-201ENST00000035307 SLC4A3P48751 1232 aa15.55■□□□□ 0.08
CHPF2-201ENST00000035307 CGNL1Q0VF96 1302 aa15.55■□□□□ 0.08
CHPF2-201ENST00000035307 PPP2R1AP30153 589 aa15.55■□□□□ 0.08
CHPF2-201ENST00000035307 ZCCHC11Q5TAX3 1644 aaKnown RBP15.54■□□□□ 0.08
CHPF2-201ENST00000035307 AMPHP49418 695 aa15.54■□□□□ 0.08
CHPF2-201ENST00000035307 HSPA2P54652 639 aa15.52■□□□□ 0.08
CHPF2-201ENST00000035307 RRS1Q15050 365 aaKnown RBP15.52■□□□□ 0.08
CHPF2-201ENST00000035307 TPRNQ4KMQ1 711 aa15.52■□□□□ 0.08
CHPF2-201ENST00000035307 DUOX2Q9NRD8 1548 aa15.52■□□□□ 0.08
CHPF2-201ENST00000035307 CRBNQ96SW2 442 aa15.51■□□□□ 0.07
CHPF2-201ENST00000035307 APBB1O00213 710 aa15.51■□□□□ 0.07
CHPF2-201ENST00000035307 COG3Q96JB2 828 aa15.51■□□□□ 0.07
CHPF2-201ENST00000035307 UGGT1Q9NYU2 1555 aa15.5■□□□□ 0.07
CHPF2-201ENST00000035307 GOLGA2Q08379 1002 aa15.5■□□□□ 0.07
CHPF2-201ENST00000035307 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.5■□□□□ 0.07
CHPF2-201ENST00000035307 ESCO1Q5FWF5 840 aa15.5■□□□□ 0.07
CHPF2-201ENST00000035307 PNISRQ8TF01 805 aaKnown RBP15.5■□□□□ 0.07
CHPF2-201ENST00000035307 CSB-PGBD3P0DP91 1061 aa15.5■□□□□ 0.07
CHPF2-201ENST00000035307 DEKP35659 375 aaKnown RBP15.5■□□□□ 0.07
CHPF2-201ENST00000035307 THEMISQ8N1K5 641 aaPredicted RBP15.5■□□□□ 0.07
CHPF2-201ENST00000035307 TESK2Q96S53 571 aa15.49■□□□□ 0.07
CHPF2-201ENST00000035307 NLRP6P59044 892 aa15.49■□□□□ 0.07
CHPF2-201ENST00000035307 PSME1Q06323 249 aa15.49■□□□□ 0.07
CHPF2-201ENST00000035307 ATP7AQ04656 1500 aa15.48■□□□□ 0.07
CHPF2-201ENST00000035307 RRP1P56182 461 aaKnown RBP15.48■□□□□ 0.07
CHPF2-201ENST00000035307 SKAP1Q86WV1 359 aa15.48■□□□□ 0.07
CHPF2-201ENST00000035307 ZRANB1Q9UGI0 708 aa15.48■□□□□ 0.07
CHPF2-201ENST00000035307 PROSER2Q86WR7 435 aaPredicted RBP15.47■□□□□ 0.07
CHPF2-201ENST00000035307 NECTIN2Q92692 538 aa15.47■□□□□ 0.07
CHPF2-201ENST00000035307 C14orf93Q9H972 538 aaKnown RBP15.47■□□□□ 0.07
CHPF2-201ENST00000035307 ZNF428Q96B54 188 aa15.47■□□□□ 0.07
CHPF2-201ENST00000035307 CDC42BPAQ5VT25 1732 aa15.47■□□□□ 0.07
CHPF2-201ENST00000035307 AMOTL2Q9Y2J4 779 aa15.47■□□□□ 0.07
CHPF2-201ENST00000035307 SLKQ9H2G2 1235 aaPredicted RBP15.46■□□□□ 0.07
CHPF2-201ENST00000035307 PRAG1Q86YV5 1406 aa15.46■□□□□ 0.07
CHPF2-201ENST00000035307 NME9Q86XW9 330 aa15.46■□□□□ 0.06
CHPF2-201ENST00000035307 ADGRL2O95490 1459 aa15.45■□□□□ 0.06
CHPF2-201ENST00000035307 NUDT16Q96DE0 195 aaKnown RBP15.44■□□□□ 0.06
CHPF2-201ENST00000035307 MYH16Q9H6N6 1097 aa15.44■□□□□ 0.06
CHPF2-201ENST00000035307 MYO5CQ9NQX4 1742 aa15.44■□□□□ 0.06
CHPF2-201ENST00000035307 SHANK2Q9UPX8 1470 aa15.44■□□□□ 0.06
CHPF2-201ENST00000035307 ADCY10Q96PN6 1610 aa15.43■□□□□ 0.06
CHPF2-201ENST00000035307 DDRGK1Q96HY6 314 aa15.43■□□□□ 0.06
CHPF2-201ENST00000035307 COG6Q9Y2V7 657 aa15.43■□□□□ 0.06
CHPF2-201ENST00000035307 ZMYM3Q14202 1370 aa15.43■□□□□ 0.06
CHPF2-201ENST00000035307 NSD3Q9BZ95 1437 aa15.43■□□□□ 0.06
CHPF2-201ENST00000035307 ANKLE2Q86XL3 938 aa15.43■□□□□ 0.06
CHPF2-201ENST00000035307 ABTB2Q8N961 1025 aa15.43■□□□□ 0.06
CHPF2-201ENST00000035307 USP35Q9P2H5 1018 aa15.43■□□□□ 0.06
CHPF2-201ENST00000035307 POGZQ7Z3K3 1410 aa15.43■□□□□ 0.06
CHPF2-201ENST00000035307 DIAPH1O60610 1272 aaKnown RBP15.43■□□□□ 0.06
CHPF2-201ENST00000035307 TEX14Q8IWB6 1497 aa15.42■□□□□ 0.06
CHPF2-201ENST00000035307 TCP11L2Q8N4U5 519 aa15.42■□□□□ 0.06
CHPF2-201ENST00000035307 STAC3Q96MF2 364 aa15.42■□□□□ 0.06
CHPF2-201ENST00000035307 THUMPD2Q9BTF0 503 aaKnown RBP15.42■□□□□ 0.06
CHPF2-201ENST00000035307 FOXO3O43524 673 aa15.42■□□□□ 0.06
CHPF2-201ENST00000035307 ZNF330Q9Y3S2 320 aaPredicted RBP15.42■□□□□ 0.06
CHPF2-201ENST00000035307 UHRF1BP1LA0JNW5 1464 aa15.41■□□□□ 0.06
CHPF2-201ENST00000035307 RIPK4P57078 832 aa15.41■□□□□ 0.06
CHPF2-201ENST00000035307 ERICH6BQ5W0A0 696 aa15.41■□□□□ 0.06
CHPF2-201ENST00000035307 ITPRIPQ8IWB1 547 aa15.41■□□□□ 0.06
CHPF2-201ENST00000035307 CLASP1Q7Z460 1538 aa15.41■□□□□ 0.06
CHPF2-201ENST00000035307 RTEL1-TNFRSF6BF6WH68 1400 aa15.41■□□□□ 0.06
CHPF2-201ENST00000035307 NPATQ14207 1427 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms