RNA–Protein interactions for RNA: ENST00000009530.11

CD74-201, Transcript of CD74 molecule, humanhuman

APPRIS P2 TSL 2 BASIC

Gene CD74, Length 981 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD74-201ENST00000009530 ZFYVE9O95405 1425 aa18.82■□□□□ 0.6
CD74-201ENST00000009530 RBM33Q96EV2 1170 aaKnown RBP18.8■□□□□ 0.6
CD74-201ENST00000009530 SLC52A1Q9NWF4 448 aa18.8■□□□□ 0.6
CD74-201ENST00000009530 NWD1Q149M9 1564 aa18.79■□□□□ 0.6
CD74-201ENST00000009530 RIMS2Q9UQ26 1411 aa18.78■□□□□ 0.6
CD74-201ENST00000009530 TMEM94Q12767 1356 aa18.76■□□□□ 0.59
CD74-201ENST00000009530 NUP155O75694 1391 aa18.75■□□□□ 0.59
CD74-201ENST00000009530 SOCS7O14512 581 aa18.74■□□□□ 0.59
CD74-201ENST00000009530 KCNA6P17658 529 aa18.74■□□□□ 0.59
CD74-201ENST00000009530 NUTM2DQ5VT03 806 aaPredicted RBP18.74■□□□□ 0.59
CD74-201ENST00000009530 PLEKHG1Q9ULL1 1385 aa18.73■□□□□ 0.59
CD74-201ENST00000009530 CHGAP10645 457 aaKnown RBP18.73■□□□□ 0.59
CD74-201ENST00000009530 BCANQ96GW7 911 aa18.72■□□□□ 0.59
CD74-201ENST00000009530 RRBP1Q9P2E9 1410 aaKnown RBP18.72■□□□□ 0.59
CD74-201ENST00000009530 CHD2O14647 1828 aaKnown RBP18.72■□□□□ 0.59
CD74-201ENST00000009530 NKTRP30414 1462 aaKnown RBP18.71■□□□□ 0.59
CD74-201ENST00000009530 SPHKAPQ2M3C7 1700 aa18.7■□□□□ 0.58
CD74-201ENST00000009530 PROSER2Q86WR7 435 aaPredicted RBP18.7■□□□□ 0.58
CD74-201ENST00000009530 ADAMTS13Q76LX8 1427 aa18.69■□□□□ 0.58
CD74-201ENST00000009530 ROBO1Q9Y6N7 1651 aa18.69■□□□□ 0.58
CD74-201ENST00000009530 PPP1R15AO75807 674 aaPredicted RBP18.68■□□□□ 0.58
CD74-201ENST00000009530 NAIPQ13075 1403 aa18.66■□□□□ 0.58
CD74-201ENST00000009530 NRXN3Q9Y4C0 1643 aa18.65■□□□□ 0.58
CD74-201ENST00000009530 FAM135BQ49AJ0 1406 aa18.65■□□□□ 0.58
CD74-201ENST00000009530 CLTCL1P53675 1640 aa18.64■□□□□ 0.57
CD74-201ENST00000009530 PTPRUQ92729 1446 aa18.63■□□□□ 0.57
CD74-201ENST00000009530 TBX22Q9Y458 520 aa18.62■□□□□ 0.57
CD74-201ENST00000009530 DIP2AQ14689 1571 aa18.62■□□□□ 0.57
CD74-201ENST00000009530 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.61■□□□□ 0.57
CD74-201ENST00000009530 MSH6P52701 1360 aa18.6■□□□□ 0.57
CD74-201ENST00000009530 HDGFP51858 240 aaKnown RBP18.59■□□□□ 0.57
CD74-201ENST00000009530 TRPM2O94759 1503 aa18.59■□□□□ 0.57
CD74-201ENST00000009530 PHF23Q9BUL5 403 aaPredicted RBP18.58■□□□□ 0.56
CD74-201ENST00000009530 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.57■□□□□ 0.56
CD74-201ENST00000009530 SETBP1Q9Y6X0 1596 aa18.57■□□□□ 0.56
CD74-201ENST00000009530 NEXMIFQ5QGS0 1516 aa18.57■□□□□ 0.56
CD74-201ENST00000009530 XRN1Q8IZH2 1706 aaKnown RBP18.57■□□□□ 0.56
CD74-201ENST00000009530 RGS17Q9UGC6 210 aaPredicted RBP18.56■□□□□ 0.56
CD74-201ENST00000009530 PHLPP1O60346 1717 aa18.56■□□□□ 0.56
CD74-201ENST00000009530 HFM1A2PYH4 1435 aa18.55■□□□□ 0.56
CD74-201ENST00000009530 ZNF326Q5BKZ1 582 aaKnown RBP18.54■□□□□ 0.56
CD74-201ENST00000009530 SLAIN2Q9P270 581 aa18.54■□□□□ 0.56
CD74-201ENST00000009530 PIK3R4Q99570 1358 aa18.54■□□□□ 0.56
CD74-201ENST00000009530 COL16A1Q07092 1604 aaPredicted RBP18.53■□□□□ 0.56
CD74-201ENST00000009530 AMOTL2Q9Y2J4 779 aa18.53■□□□□ 0.56
CD74-201ENST00000009530 METP08581 1390 aa18.53■□□□□ 0.56
CD74-201ENST00000009530 KIF1BO60333 1816 aa18.52■□□□□ 0.56
CD74-201ENST00000009530 TRIM52Q96A61 297 aa18.51■□□□□ 0.55
CD74-201ENST00000009530 NCOA3Q9Y6Q9 1424 aa18.5■□□□□ 0.55
CD74-201ENST00000009530 C14orf37Q86TY3 774 aa18.5■□□□□ 0.55
CD74-201ENST00000009530 SETD1AO15047 1707 aaKnown RBP18.49■□□□□ 0.55
CD74-201ENST00000009530 FOXD1Q16676 465 aa18.47■□□□□ 0.55
CD74-201ENST00000009530 NALCNQ8IZF0 1738 aa18.46■□□□□ 0.55
CD74-201ENST00000009530 AHDC1Q5TGY3 1603 aaPredicted RBP18.45■□□□□ 0.54
CD74-201ENST00000009530 POTEAQ6S8J7 498 aa18.45■□□□□ 0.54
CD74-201ENST00000009530 C19orf44Q9H6X5 657 aa18.45■□□□□ 0.54
CD74-201ENST00000009530 LRP6O75581 1613 aa18.45■□□□□ 0.54
CD74-201ENST00000009530 SLC4A1APQ9BWU0 796 aaKnown RBP18.44■□□□□ 0.54
CD74-201ENST00000009530 PPLO60437 1756 aa18.43■□□□□ 0.54
CD74-201ENST00000009530 CADPS2Q86UW7 1296 aa18.43■□□□□ 0.54
CD74-201ENST00000009530 JCADQ9P266 1359 aa18.42■□□□□ 0.54
CD74-201ENST00000009530 MST1RQ04912 1400 aa18.42■□□□□ 0.54
CD74-201ENST00000009530 ATF3P18847 181 aa18.42■□□□□ 0.54
CD74-201ENST00000009530 BRINP3Q76B58 766 aa18.41■□□□□ 0.54
CD74-201ENST00000009530 DCCP43146 1447 aa18.4■□□□□ 0.54
CD74-201ENST00000009530 ASXL1Q8IXJ9 1541 aa18.4■□□□□ 0.54
CD74-201ENST00000009530 ADGRL3Q9HAR2 1447 aa18.4■□□□□ 0.54
CD74-201ENST00000009530 SHPRHQ149N8 1683 aa18.39■□□□□ 0.53
CD74-201ENST00000009530 NHSL1Q5SYE7 1610 aa18.38■□□□□ 0.53
CD74-201ENST00000009530 DDX17Q92841 729 aaKnown RBP18.37■□□□□ 0.53
CD74-201ENST00000009530 ROBO2Q9HCK4 1378 aa18.37■□□□□ 0.53
CD74-201ENST00000009530 IFT172Q9UG01 1749 aa18.35■□□□□ 0.53
CD74-201ENST00000009530 PTCH1Q13635 1447 aa18.34■□□□□ 0.53
CD74-201ENST00000009530 SPATA31E1Q6ZUB1 1445 aa18.33■□□□□ 0.53
CD74-201ENST00000009530 ADGRF5Q8IZF2 1346 aa18.33■□□□□ 0.53
CD74-201ENST00000009530 VGFO15240 615 aaPredicted RBP18.33■□□□□ 0.52
CD74-201ENST00000009530 MPHOSPH9Q99550 1183 aa18.32■□□□□ 0.52
CD74-201ENST00000009530 CCDC144AA2RUR9 1427 aa18.32■□□□□ 0.52
CD74-201ENST00000009530 RPGRIP1LQ68CZ1 1315 aa18.31■□□□□ 0.52
CD74-201ENST00000009530 RGL3Q3MIN7 710 aa18.31■□□□□ 0.52
CD74-201ENST00000009530 C1orf167Q5SNV9 1468 aa18.31■□□□□ 0.52
CD74-201ENST00000009530 PRAG1Q86YV5 1406 aa18.31■□□□□ 0.52
CD74-201ENST00000009530 SPATA31A6Q5VVP1 1343 aa18.3■□□□□ 0.52
CD74-201ENST00000009530 SETD5Q9C0A6 1442 aa18.3■□□□□ 0.52
CD74-201ENST00000009530 NUTM2BA6NNL0 878 aaPredicted RBP18.28■□□□□ 0.52
CD74-201ENST00000009530 NUTM2EB1AL46 878 aaPredicted RBP18.28■□□□□ 0.52
CD74-201ENST00000009530 NUTM2AQ8IVF1 878 aaPredicted RBP18.28■□□□□ 0.52
CD74-201ENST00000009530 MEX3CQ5U5Q3 659 aaKnown RBP18.26■□□□□ 0.51
CD74-201ENST00000009530 ORAI2Q96SN7 254 aa18.26■□□□□ 0.51
CD74-201ENST00000009530 LAMC1P11047 1609 aa18.26■□□□□ 0.51
CD74-201ENST00000009530 PNPLA6Q8IY17 1366 aa18.25■□□□□ 0.51
CD74-201ENST00000009530 PIK3C2GO75747 1445 aa18.23■□□□□ 0.51
CD74-201ENST00000009530 RAB3GAP2Q9H2M9 1393 aa18.23■□□□□ 0.51
CD74-201ENST00000009530 PLEKHH1Q9ULM0 1364 aa18.23■□□□□ 0.51
CD74-201ENST00000009530 TMEM132EQ6IEE7 984 aa18.23■□□□□ 0.51
CD74-201ENST00000009530 KNDC1Q76NI1 1749 aa18.23■□□□□ 0.51
CD74-201ENST00000009530 CDC42BPGQ6DT37 1551 aa18.22■□□□□ 0.51
CD74-201ENST00000009530 STK26Q9P289 416 aa18.22■□□□□ 0.51
CD74-201ENST00000009530 WAPLQ7Z5K2 1190 aa18.21■□□□□ 0.51
CD74-201ENST00000009530 TECPR2O15040 1411 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms