RNA–Protein interactions for RNA: ENST00000006275.8

TRAPPC6A-201, Transcript of trafficking protein particle complex 6A, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC6A, Length 805 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6A-201ENST00000006275 SLAIN2Q9P270 581 aa29.24■■■□□ 2.27
TRAPPC6A-201ENST00000006275 SLC52A1Q9NWF4 448 aa29.23■■■□□ 2.27
TRAPPC6A-201ENST00000006275 JCADQ9P266 1359 aa29.22■■■□□ 2.27
TRAPPC6A-201ENST00000006275 FGD6Q6ZV73 1430 aa29.2■■■□□ 2.26
TRAPPC6A-201ENST00000006275 PHLPP1O60346 1717 aa29.18■■■□□ 2.26
TRAPPC6A-201ENST00000006275 PPP1R15AO75807 674 aaPredicted RBP29.16■■■□□ 2.26
TRAPPC6A-201ENST00000006275 SETD1AO15047 1707 aaKnown RBP29.15■■■□□ 2.26
TRAPPC6A-201ENST00000006275 PLEKHG1Q9ULL1 1385 aa29.14■■■□□ 2.26
TRAPPC6A-201ENST00000006275 ZFYVE9O95405 1425 aa29.12■■■□□ 2.25
TRAPPC6A-201ENST00000006275 HDGFP51858 240 aaKnown RBP29.11■■■□□ 2.25
TRAPPC6A-201ENST00000006275 RIMS2Q9UQ26 1411 aa29.11■■■□□ 2.25
TRAPPC6A-201ENST00000006275 C14orf37Q86TY3 774 aa29.1■■■□□ 2.25
TRAPPC6A-201ENST00000006275 RPRD2Q5VT52 1461 aaKnown RBP29.1■■■□□ 2.25
TRAPPC6A-201ENST00000006275 MEX3CQ5U5Q3 659 aaKnown RBP29.08■■■□□ 2.25
TRAPPC6A-201ENST00000006275 COL16A1Q07092 1604 aaPredicted RBP29.08■■■□□ 2.25
TRAPPC6A-201ENST00000006275 CHD2O14647 1828 aaKnown RBP29.06■■■□□ 2.24
TRAPPC6A-201ENST00000006275 SPATA31A6Q5VVP1 1343 aa29.06■■■□□ 2.24
TRAPPC6A-201ENST00000006275 ADGRL2O95490 1459 aa29.05■■■□□ 2.24
TRAPPC6A-201ENST00000006275 NCOA3Q9Y6Q9 1424 aa29.05■■■□□ 2.24
TRAPPC6A-201ENST00000006275 PPARGC1BQ86YN6 1023 aaKnown RBP29.05■■■□□ 2.24
TRAPPC6A-201ENST00000006275 TBX22Q9Y458 520 aa29.05■■■□□ 2.24
TRAPPC6A-201ENST00000006275 LRP6O75581 1613 aa29.05■■■□□ 2.24
TRAPPC6A-201ENST00000006275 ZNF772Q68DY9 489 aaPredicted RBP29.04■■■□□ 2.24
TRAPPC6A-201ENST00000006275 CHGAP10645 457 aaKnown RBP29.03■■■□□ 2.24
TRAPPC6A-201ENST00000006275 ANKRD50Q9ULJ7 1429 aa29.03■■■□□ 2.24
TRAPPC6A-201ENST00000006275 CADPS2Q86UW7 1296 aa29.01■■■□□ 2.23
TRAPPC6A-201ENST00000006275 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.01■■■□□ 2.23
TRAPPC6A-201ENST00000006275 GCC2Q8IWJ2 1684 aa29.01■■■□□ 2.23
TRAPPC6A-201ENST00000006275 MYO5BQ9ULV0 1848 aa29.01■■■□□ 2.23
TRAPPC6A-201ENST00000006275 TRIM52Q96A61 297 aa29■■■□□ 2.23
TRAPPC6A-201ENST00000006275 TMEM131LA2VDJ0 1609 aa28.99■■■□□ 2.23
TRAPPC6A-201ENST00000006275 ATF3P18847 181 aa28.99■■■□□ 2.23
TRAPPC6A-201ENST00000006275 FAM50AQ14320 339 aaKnown RBP28.99■■■□□ 2.23
TRAPPC6A-201ENST00000006275 NUTM2DQ5VT03 806 aaPredicted RBP28.98■■■□□ 2.23
TRAPPC6A-201ENST00000006275 UPF1Q92900 1129 aaKnown RBP eCLIP28.98■■■□□ 2.231e-11■■■■■ 27
TRAPPC6A-201ENST00000006275 C19orf44Q9H6X5 657 aa28.98■■■□□ 2.23
TRAPPC6A-201ENST00000006275 ADAMTS13Q76LX8 1427 aa28.96■■■□□ 2.23
TRAPPC6A-201ENST00000006275 AHDC1Q5TGY3 1603 aaPredicted RBP28.96■■■□□ 2.23
TRAPPC6A-201ENST00000006275 PIK3R4Q99570 1358 aa28.93■■■□□ 2.22
TRAPPC6A-201ENST00000006275 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.93■■■□□ 2.22
TRAPPC6A-201ENST00000006275 DIP2AQ14689 1571 aa28.92■■■□□ 2.22
TRAPPC6A-201ENST00000006275 SHPRHQ149N8 1683 aa28.9■■■□□ 2.22
TRAPPC6A-201ENST00000006275 RXRBP28702 533 aa28.9■■■□□ 2.22
TRAPPC6A-201ENST00000006275 NUTM2BA6NNL0 878 aaPredicted RBP28.89■■■□□ 2.22
TRAPPC6A-201ENST00000006275 NUTM2EB1AL46 878 aaPredicted RBP28.89■■■□□ 2.22
TRAPPC6A-201ENST00000006275 NUTM2AQ8IVF1 878 aaPredicted RBP28.89■■■□□ 2.22
TRAPPC6A-201ENST00000006275 BRINP3Q76B58 766 aa28.88■■■□□ 2.21
TRAPPC6A-201ENST00000006275 AMOTL2Q9Y2J4 779 aa28.88■■■□□ 2.21
TRAPPC6A-201ENST00000006275 TRPM2O94759 1503 aa28.85■■■□□ 2.21
TRAPPC6A-201ENST00000006275 UNC13BO14795 1591 aa28.84■■■□□ 2.21
TRAPPC6A-201ENST00000006275 PTPRUQ92729 1446 aa28.82■■■□□ 2.2
TRAPPC6A-201ENST00000006275 E9PCH4 1651 aa28.81■■■□□ 2.2
TRAPPC6A-201ENST00000006275 AFF2P51816 1311 aa28.81■■■□□ 2.2
TRAPPC6A-201ENST00000006275 CDK12Q9NYV4 1490 aaPredicted RBP28.8■■■□□ 2.2
TRAPPC6A-201ENST00000006275 DCCP43146 1447 aa28.8■■■□□ 2.2
TRAPPC6A-201ENST00000006275 ASXL1Q8IXJ9 1541 aa28.78■■■□□ 2.2
TRAPPC6A-201ENST00000006275 SETD5Q9C0A6 1442 aa28.76■■■□□ 2.19
TRAPPC6A-201ENST00000006275 MST1RQ04912 1400 aa28.74■■■□□ 2.19
TRAPPC6A-201ENST00000006275 LRRC59Q96AG4 307 aaKnown RBP28.73■■■□□ 2.19
TRAPPC6A-201ENST00000006275 IQGAP3Q86VI3 1631 aa28.72■■■□□ 2.19
TRAPPC6A-201ENST00000006275 NUP155O75694 1391 aa28.72■■■□□ 2.19
TRAPPC6A-201ENST00000006275 C8orf37Q96NL8 207 aa28.71■■■□□ 2.19
TRAPPC6A-201ENST00000006275 ITGAEP38570 1179 aa28.7■■■□□ 2.18
TRAPPC6A-201ENST00000006275 ROCK1Q13464 1354 aa28.7■■■□□ 2.18
TRAPPC6A-201ENST00000006275 RRBP1Q9P2E9 1410 aaKnown RBP28.69■■■□□ 2.18
TRAPPC6A-201ENST00000006275 XRN1Q8IZH2 1706 aaKnown RBP28.69■■■□□ 2.18
TRAPPC6A-201ENST00000006275 QTRT2Q9H974 415 aaKnown RBP28.68■■■□□ 2.18
TRAPPC6A-201ENST00000006275 RBM6P78332 1123 aaKnown RBP28.67■■■□□ 2.18
TRAPPC6A-201ENST00000006275 NHSL1Q5SYE7 1610 aa28.67■■■□□ 2.18
TRAPPC6A-201ENST00000006275 RGS12O14924 1447 aa28.67■■■□□ 2.18
TRAPPC6A-201ENST00000006275 SETBP1Q9Y6X0 1596 aa28.67■■■□□ 2.18
TRAPPC6A-201ENST00000006275 NRXN3Q9Y4C0 1643 aa28.66■■■□□ 2.18
TRAPPC6A-201ENST00000006275 ZNF326Q5BKZ1 582 aaKnown RBP28.66■■■□□ 2.18
TRAPPC6A-201ENST00000006275 DDX17Q92841 729 aaKnown RBP28.66■■■□□ 2.18
TRAPPC6A-201ENST00000006275 METP08581 1390 aa28.65■■■□□ 2.18
TRAPPC6A-201ENST00000006275 PNPLA6Q8IY17 1366 aa28.65■■■□□ 2.18
TRAPPC6A-201ENST00000006275 ADGRL3Q9HAR2 1447 aa28.64■■■□□ 2.18
TRAPPC6A-201ENST00000006275 ADAMTS2O95450 1211 aa28.59■■■□□ 2.17
TRAPPC6A-201ENST00000006275 NGLY1Q96IV0 654 aa28.59■■■□□ 2.17
TRAPPC6A-201ENST00000006275 SPHKAPQ2M3C7 1700 aa28.54■■■□□ 2.16
TRAPPC6A-201ENST00000006275 C1orf167Q5SNV9 1468 aa28.53■■■□□ 2.16
TRAPPC6A-201ENST00000006275 NALCNQ8IZF0 1738 aa28.52■■■□□ 2.16
TRAPPC6A-201ENST00000006275 ATAD2Q6PL18 1390 aa28.51■■■□□ 2.16
TRAPPC6A-201ENST00000006275 USP21Q9UK80 565 aa28.49■■■□□ 2.15
TRAPPC6A-201ENST00000006275 NEXMIFQ5QGS0 1516 aa28.48■■■□□ 2.15
TRAPPC6A-201ENST00000006275 SOS2Q07890 1332 aaPredicted RBP28.46■■■□□ 2.15
TRAPPC6A-201ENST00000006275 ORAI2Q96SN7 254 aa28.46■■■□□ 2.15
TRAPPC6A-201ENST00000006275 TRPC5Q9UL62 973 aaPredicted RBP28.46■■■□□ 2.15
TRAPPC6A-201ENST00000006275 PTCH1Q13635 1447 aa28.44■■■□□ 2.14
TRAPPC6A-201ENST00000006275 CLTCL1P53675 1640 aa28.43■■■□□ 2.14
TRAPPC6A-201ENST00000006275 LAMC1P11047 1609 aa28.42■■■□□ 2.14
TRAPPC6A-201ENST00000006275 ROBO2Q9HCK4 1378 aa28.41■■■□□ 2.14
TRAPPC6A-201ENST00000006275 FOXD1Q16676 465 aa28.41■■■□□ 2.14
TRAPPC6A-201ENST00000006275 SRCAPQ6ZRS2 3230 aa28.41■■■□□ 2.14
TRAPPC6A-201ENST00000006275 FNBP4Q8N3X1 1017 aaPredicted RBP28.4■■■□□ 2.14
TRAPPC6A-201ENST00000006275 ZRANB1Q9UGI0 708 aa28.38■■■□□ 2.13
TRAPPC6A-201ENST00000006275 ATRNO75882 1429 aa28.37■■■□□ 2.13
TRAPPC6A-201ENST00000006275 VGFO15240 615 aaPredicted RBP28.37■■■□□ 2.13
TRAPPC6A-201ENST00000006275 NAIPQ13075 1403 aa28.35■■■□□ 2.13
TRAPPC6A-201ENST00000006275 KIF1BO60333 1816 aa28.33■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms