RNA–Protein interactions for RNA: ENSMUST00000143379.1

Sqstm1-205, Transcript of Sequestosome-1, mousemouse

TSL 5 BASIC

Gene Sqstm1, Length 1,266 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sqstm1-205ENSMUST00000143379 Arap3Q8R5G7 1538 aa27.62■■■□□ 2.01
Sqstm1-205ENSMUST00000143379 Evi5lH3BKQ3 813 aa27.61■■■□□ 2.01
Sqstm1-205ENSMUST00000143379 P3h3Q8CG70 732 aa27.61■■■□□ 2.01
Sqstm1-205ENSMUST00000143379 Ttc21bQ0HA38 1315 aa27.6■■■□□ 2.01
Sqstm1-205ENSMUST00000143379 Ankrd36D3Z4K0 1415 aa27.58■■■□□ 2.01
Sqstm1-205ENSMUST00000143379 Lmtk3Q5XJV6 1424 aa27.58■■■□□ 2.01
Sqstm1-205ENSMUST00000143379 Ehbp1l1Q99MS7 1716 aa27.58■■■□□ 2.01
Sqstm1-205ENSMUST00000143379 Gm13695A2AK44 830 aa27.58■■■□□ 2.01
Sqstm1-205ENSMUST00000143379 Ino80Q6ZPV2 1559 aa27.56■■■□□ 2
Sqstm1-205ENSMUST00000143379 Slain2Q8CI08 581 aa27.55■■■□□ 2
Sqstm1-205ENSMUST00000143379 AnkarA2RT91 1465 aa27.54■■■□□ 2
Sqstm1-205ENSMUST00000143379 Psme1P97371 249 aa27.54■■■□□ 2
Sqstm1-205ENSMUST00000143379 PtprvP70289 1705 aa27.53■■■□□ 2
Sqstm1-205ENSMUST00000143379 Tns3Q5SSZ5 1440 aa27.52■■■□□ 2
Sqstm1-205ENSMUST00000143379 Lrp6O88572 1613 aa27.51■■□□□ 1.99
Sqstm1-205ENSMUST00000143379 Asxl2Q8BZ32 1370 aa27.5■■□□□ 1.99
Sqstm1-205ENSMUST00000143379 MypopQ8R4U1 393 aa27.5■■□□□ 1.99
Sqstm1-205ENSMUST00000143379 Prdm2A2A7B5 1709 aaKnown RBP27.5■■□□□ 1.99
Sqstm1-205ENSMUST00000143379 PalldQ9ET54 1408 aa27.48■■□□□ 1.99
Sqstm1-205ENSMUST00000143379 Dmrt2Q8BG36 561 aa27.45■■□□□ 1.98
Sqstm1-205ENSMUST00000143379 PplQ9R269 1755 aa27.45■■□□□ 1.98
Sqstm1-205ENSMUST00000143379 Siglec1Q62230 1695 aa27.44■■□□□ 1.98
Sqstm1-205ENSMUST00000143379 Efcab6Q6P1E8 1516 aa27.43■■□□□ 1.98
Sqstm1-205ENSMUST00000143379 Rgs17Q9QZB0 210 aa27.42■■□□□ 1.98
Sqstm1-205ENSMUST00000143379 Atp7aQ64430 1491 aa27.4■■□□□ 1.98
Sqstm1-205ENSMUST00000143379 Ylpm1Q9R0I7 1386 aaKnown RBP27.39■■□□□ 1.98
Sqstm1-205ENSMUST00000143379 Znf526Q8BI66 675 aa27.39■■□□□ 1.98
Sqstm1-205ENSMUST00000143379 MpndQ3TV65 487 aa27.36■■□□□ 1.97
Sqstm1-205ENSMUST00000143379 Prrc2bQ7TPM1 1486 aaKnown RBP27.36■■□□□ 1.97
Sqstm1-205ENSMUST00000143379 Slit3Q9WVB4 1523 aa27.35■■□□□ 1.97
Sqstm1-205ENSMUST00000143379 Nwd1A6H603 1563 aa27.35■■□□□ 1.97
Sqstm1-205ENSMUST00000143379 Bcl2l12Q9D3J3 255 aa27.34■■□□□ 1.97
Sqstm1-205ENSMUST00000143379 Uggt1Q6P5E4 1551 aa27.34■■□□□ 1.97
Sqstm1-205ENSMUST00000143379 Zfp142G5E869 1843 aa27.32■■□□□ 1.96
Sqstm1-205ENSMUST00000143379 Tecpr2Q3UH45 1423 aa27.31■■□□□ 1.96
Sqstm1-205ENSMUST00000143379 Myom3A2ABU4 1439 aa27.29■■□□□ 1.96
Sqstm1-205ENSMUST00000143379 Erich6D3Z6S9 713 aa27.28■■□□□ 1.96
Sqstm1-205ENSMUST00000143379 Map4P27546 1125 aaKnown RBP27.28■■□□□ 1.96
Sqstm1-205ENSMUST00000143379 Ggt6Q6PDE7 497 aa27.28■■□□□ 1.96
Sqstm1-205ENSMUST00000143379 Arhgef28P97433 1693 aa27.27■■□□□ 1.96
Sqstm1-205ENSMUST00000143379 Iqgap3F8VQ29 1632 aa27.27■■□□□ 1.96
Sqstm1-205ENSMUST00000143379 Zfp644E9QA22 1323 aa27.27■■□□□ 1.96
Sqstm1-205ENSMUST00000143379 Ybx3Q9JKB3 361 aaKnown RBP27.26■■□□□ 1.95
Sqstm1-205ENSMUST00000143379 Atf3Q60765 181 aa27.25■■□□□ 1.95
Sqstm1-205ENSMUST00000143379 Tmem94Q7TSH8 1360 aa27.24■■□□□ 1.95
Sqstm1-205ENSMUST00000143379 Stk24Q99KH8 431 aa27.24■■□□□ 1.95
Sqstm1-205ENSMUST00000143379 Nup155Q99P88 1391 aaKnown RBP27.22■■□□□ 1.95
Sqstm1-205ENSMUST00000143379 Unc13bQ9Z1N9 1602 aa27.21■■□□□ 1.95
Sqstm1-205ENSMUST00000143379 Tarbp1E9Q368 1579 aa27.21■■□□□ 1.95
Sqstm1-205ENSMUST00000143379 Mroh1E0CZ22 1640 aa27.19■■□□□ 1.94
Sqstm1-205ENSMUST00000143379 Rprd2Q6NXI6 1469 aaKnown RBP27.19■■□□□ 1.94
Sqstm1-205ENSMUST00000143379 Dapk1Q80YE7 1442 aa27.17■■□□□ 1.94
Sqstm1-205ENSMUST00000143379 C3P01027 1663 aa27.17■■□□□ 1.94
Sqstm1-205ENSMUST00000143379 KdrP35918 1367 aa27.16■■□□□ 1.94
Sqstm1-205ENSMUST00000143379 Nsd2Q8BVE8 1365 aa27.16■■□□□ 1.94
Sqstm1-205ENSMUST00000143379 Sall3Q62255 1320 aa27.15■■□□□ 1.94
Sqstm1-205ENSMUST00000143379 Marf1Q8BJ34 1730 aaKnown RBP27.14■■□□□ 1.94
Sqstm1-205ENSMUST00000143379 Col14a1Q80X19 1797 aa27.14■■□□□ 1.93
Sqstm1-205ENSMUST00000143379 Abcc10Q8R4P9 1501 aa27.12■■□□□ 1.93
Sqstm1-205ENSMUST00000143379 Kif24Q6NWW5 1356 aa27.11■■□□□ 1.93
Sqstm1-205ENSMUST00000143379 NalcnQ8BXR5 1738 aa27.11■■□□□ 1.93
Sqstm1-205ENSMUST00000143379 Cd109Q8R422 1442 aa27.11■■□□□ 1.93
Sqstm1-205ENSMUST00000143379 Ddx17Q501J6 650 aaKnown RBP27.11■■□□□ 1.93
Sqstm1-205ENSMUST00000143379 Clstn2Q9ER65 966 aa27.11■■□□□ 1.93
Sqstm1-205ENSMUST00000143379 NclP09405 707 aaKnown RBP27.1■■□□□ 1.93
Sqstm1-205ENSMUST00000143379 HnrnpmQ9D0E1 729 aaKnown RBP27.06■■□□□ 1.92
Sqstm1-205ENSMUST00000143379 Q9D9H8 365 aa27.04■■□□□ 1.92
Sqstm1-205ENSMUST00000143379 Ttll5Q8CHB8 1328 aa27.04■■□□□ 1.92
Sqstm1-205ENSMUST00000143379 PtprgQ05909 1442 aa27.04■■□□□ 1.92
Sqstm1-205ENSMUST00000143379 Col22a1E9Q7P1 1613 aa27.03■■□□□ 1.92
Sqstm1-205ENSMUST00000143379 Abca8aQ8K442 1620 aa27.03■■□□□ 1.92
Sqstm1-205ENSMUST00000143379 Atp1b4Q99ME6 356 aa27.03■■□□□ 1.92
Sqstm1-205ENSMUST00000143379 Kdm2bQ6P1G2 1309 aa27.02■■□□□ 1.92
Sqstm1-205ENSMUST00000143379 Smim5Q8BT42 78 aa27.02■■□□□ 1.92
Sqstm1-205ENSMUST00000143379 Fam50aQ9WV03 339 aaKnown RBP27.02■■□□□ 1.92
Sqstm1-205ENSMUST00000143379 UacaQ8CGB3 1411 aa27.01■■□□□ 1.91
Sqstm1-205ENSMUST00000143379 Pik3r4Q8VD65 1358 aa27.01■■□□□ 1.91
Sqstm1-205ENSMUST00000143379 Pik3c2gO70167 1506 aa27■■□□□ 1.91
Sqstm1-205ENSMUST00000143379 Rfx7F8VPJ6 1459 aa27■■□□□ 1.91
Sqstm1-205ENSMUST00000143379 AatkQ80YE4 1365 aa26.98■■□□□ 1.91
Sqstm1-205ENSMUST00000143379 AU022751B1B0V2 589 aa26.97■■□□□ 1.91
Sqstm1-205ENSMUST00000143379 Pik3c2bE9QAN8 1632 aa26.97■■□□□ 1.91
Sqstm1-205ENSMUST00000143379 ErbinQ80TH2 1402 aa26.96■■□□□ 1.91
Sqstm1-205ENSMUST00000143379 Eno4Q8C042 619 aa26.95■■□□□ 1.9
Sqstm1-205ENSMUST00000143379 Ift172Q6VH22 1749 aa26.94■■□□□ 1.9
Sqstm1-205ENSMUST00000143379 Robo1O89026 1612 aa26.94■■□□□ 1.9
Sqstm1-205ENSMUST00000143379 Myom1Q62234 1667 aaKnown RBP26.93■■□□□ 1.9
Sqstm1-205ENSMUST00000143379 GnpatP98192 678 aa26.93■■□□□ 1.9
Sqstm1-205ENSMUST00000143379 Itsn2Q9Z0R6 1659 aa26.9■■□□□ 1.9
Sqstm1-205ENSMUST00000143379 Emilin2Q8K482 1074 aa26.9■■□□□ 1.9
Sqstm1-205ENSMUST00000143379 Tex14Q7M6U3 1450 aa26.89■■□□□ 1.9
Sqstm1-205ENSMUST00000143379 Trak1Q6PD31 939 aa26.89■■□□□ 1.9
Sqstm1-205ENSMUST00000143379 Shq1Q7TMX5 569 aa26.89■■□□□ 1.9
Sqstm1-205ENSMUST00000143379 Edc4Q3UJB9 1406 aaKnown RBP26.89■■□□□ 1.89
Sqstm1-205ENSMUST00000143379 DccP70211 1447 aa26.88■■□□□ 1.89
Sqstm1-205ENSMUST00000143379 Sipa1l2Q80TE4 1722 aa26.87■■□□□ 1.89
Sqstm1-205ENSMUST00000143379 N4bp2F8VQG7 1678 aaKnown RBP26.87■■□□□ 1.89
Sqstm1-205ENSMUST00000143379 Rreb1Q3UH06 1700 aaKnown RBP26.86■■□□□ 1.89
Sqstm1-205ENSMUST00000143379 Cps1Q8C196 1500 aa26.8■■□□□ 1.88
Sqstm1-205ENSMUST00000143379 Gm10563F6WIE4 79 aa26.8■■□□□ 1.88
Retrieved 100 of 22,080 RNA–protein pairs in 10.5 ms