RNA–Protein interactions for RNA: ENSMUST00000038844.6

Ubd-201, Transcript of Ubiquitin D, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubd, Length 931 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubd-201ENSMUST00000038844 Fbxo41Q6NS60 873 aa12.47□□□□□ -0.41
Ubd-201ENSMUST00000038844 Ncoa1P70365 1447 aa12.46□□□□□ -0.41
Ubd-201ENSMUST00000038844 Nup155Q99P88 1391 aaKnown RBP12.46□□□□□ -0.41
Ubd-201ENSMUST00000038844 Map4P27546 1125 aaKnown RBP12.46□□□□□ -0.41
Ubd-201ENSMUST00000038844 Zbtb7cQ8VCZ7 619 aa12.46□□□□□ -0.41
Ubd-201ENSMUST00000038844 Topaz1E5FYH1 1653 aa12.45□□□□□ -0.42
Ubd-201ENSMUST00000038844 Jarid2Q62315 1234 aa12.44□□□□□ -0.42
Ubd-201ENSMUST00000038844 Ttc21bQ0HA38 1315 aa12.43□□□□□ -0.42
Ubd-201ENSMUST00000038844 Myom3A2ABU4 1439 aa12.42□□□□□ -0.42
Ubd-201ENSMUST00000038844 Myo5cE9Q1F5 1742 aa12.42□□□□□ -0.42
Ubd-201ENSMUST00000038844 Lmtk3Q5XJV6 1424 aa12.41□□□□□ -0.42
Ubd-201ENSMUST00000038844 Pip4k2bQ80XI4 416 aa12.41□□□□□ -0.42
Ubd-201ENSMUST00000038844 ShprhQ7TPQ3 1674 aa12.41□□□□□ -0.42
Ubd-201ENSMUST00000038844 Robo2Q7TPD3 1470 aa12.4□□□□□ -0.43
Ubd-201ENSMUST00000038844 Rimbp3Q3V0F0 1606 aa12.38□□□□□ -0.43
Ubd-201ENSMUST00000038844 Evx2P49749 475 aa12.38□□□□□ -0.43
Ubd-201ENSMUST00000038844 Tshz2Q68FE9 1030 aa12.38□□□□□ -0.43
Ubd-201ENSMUST00000038844 Rapgef3Q8VCC8 918 aa12.38□□□□□ -0.43
Ubd-201ENSMUST00000038844 Kdm5aQ3UXZ9 1690 aa12.38□□□□□ -0.43
Ubd-201ENSMUST00000038844 Adgrb3Q80ZF8 1522 aa12.37□□□□□ -0.43
Ubd-201ENSMUST00000038844 Kif1bQ60575 1816 aaKnown RBP12.37□□□□□ -0.43
Ubd-201ENSMUST00000038844 AnkarA2RT91 1465 aa12.37□□□□□ -0.43
Ubd-201ENSMUST00000038844 Skint5A7XUY5 1461 aa12.37□□□□□ -0.43
Ubd-201ENSMUST00000038844 Scaf11E9PZM7 1456 aaKnown RBP12.37□□□□□ -0.43
Ubd-201ENSMUST00000038844 Rims2Q9EQZ7 1530 aa12.37□□□□□ -0.43
Ubd-201ENSMUST00000038844 Arid4bA2CG63 1314 aaKnown RBP12.37□□□□□ -0.43
Ubd-201ENSMUST00000038844 Prex1Q69ZK0 1650 aa12.36□□□□□ -0.43
Ubd-201ENSMUST00000038844 Ccer2J3QPU5 274 aa12.36□□□□□ -0.43
Ubd-201ENSMUST00000038844 Iqsec2Q5DU25 1478 aa12.35□□□□□ -0.43
Ubd-201ENSMUST00000038844 DroshaQ5HZJ0 1373 aaKnown RBP12.35□□□□□ -0.43
Ubd-201ENSMUST00000038844 PtprgQ05909 1442 aa12.35□□□□□ -0.43
Ubd-201ENSMUST00000038844 Tecpr2Q3UH45 1423 aa12.35□□□□□ -0.43
Ubd-201ENSMUST00000038844 Cd109Q8R422 1442 aa12.35□□□□□ -0.43
Ubd-201ENSMUST00000038844 PzpQ61838 1495 aa12.34□□□□□ -0.43
Ubd-201ENSMUST00000038844 AlkP97793 1621 aa12.34□□□□□ -0.43
Ubd-201ENSMUST00000038844 Fxr2Q9WVR4 673 aaKnown RBP12.34□□□□□ -0.43
Ubd-201ENSMUST00000038844 Tarbp1E9Q368 1579 aa12.34□□□□□ -0.43
Ubd-201ENSMUST00000038844 Gemin5Q8BX17 1502 aaKnown RBP12.33□□□□□ -0.44
Ubd-201ENSMUST00000038844 Txndc2Q6P902 515 aa12.33□□□□□ -0.44
Ubd-201ENSMUST00000038844 Scn4aQ9ER60 1841 aa12.32□□□□□ -0.44
Ubd-201ENSMUST00000038844 Ltbp4Q8K4G1 1666 aa12.32□□□□□ -0.44
Ubd-201ENSMUST00000038844 Efcab6Q6P1E8 1516 aa12.32□□□□□ -0.44
Ubd-201ENSMUST00000038844 Ttll5Q8CHB8 1328 aa12.32□□□□□ -0.44
Ubd-201ENSMUST00000038844 Phlpp1Q8CHE4 1687 aa12.32□□□□□ -0.44
Ubd-201ENSMUST00000038844 Tmem131lQ3U3D7 1597 aa12.31□□□□□ -0.44
Ubd-201ENSMUST00000038844 Uggt1Q6P5E4 1551 aa12.31□□□□□ -0.44
Ubd-201ENSMUST00000038844 Lamc1P02468 1607 aaKnown RBP12.31□□□□□ -0.44
Ubd-201ENSMUST00000038844 Akap12Q9WTQ5 1684 aa12.31□□□□□ -0.44
Ubd-201ENSMUST00000038844 Trak1Q6PD31 939 aa12.3□□□□□ -0.44
Ubd-201ENSMUST00000038844 Asxl1P59598 1514 aa12.29□□□□□ -0.44
Ubd-201ENSMUST00000038844 Gm13695A2AK44 830 aa12.29□□□□□ -0.44
Ubd-201ENSMUST00000038844 Map3k10Q66L42 940 aa12.29□□□□□ -0.44
Ubd-201ENSMUST00000038844 Zfp644E9QA22 1323 aa12.29□□□□□ -0.44
Ubd-201ENSMUST00000038844 PalldQ9ET54 1408 aa12.28□□□□□ -0.44
Ubd-201ENSMUST00000038844 Psme1P97371 249 aa12.28□□□□□ -0.44
Ubd-201ENSMUST00000038844 Ppp1r37Q8BKR5 712 aa12.28□□□□□ -0.44
Ubd-201ENSMUST00000038844 Ehmt2Q9Z148 1263 aaKnown RBP12.28□□□□□ -0.44
Ubd-201ENSMUST00000038844 Naip7Q9JIB3 1402 aa12.28□□□□□ -0.44
Ubd-201ENSMUST00000038844 Nrxn3Q6P9K9 1571 aa12.27□□□□□ -0.44
Ubd-201ENSMUST00000038844 Ino80Q6ZPV2 1559 aa12.27□□□□□ -0.44
Ubd-201ENSMUST00000038844 Erich6D3Z6S9 713 aa12.27□□□□□ -0.45
Ubd-201ENSMUST00000038844 ErbinQ80TH2 1402 aa12.27□□□□□ -0.45
Ubd-201ENSMUST00000038844 Chd2E9PZM4 1827 aaKnown RBP12.26□□□□□ -0.45
Ubd-201ENSMUST00000038844 Mphosph9A6H5Y1 991 aa12.24□□□□□ -0.45
Ubd-201ENSMUST00000038844 Rprd2Q6NXI6 1469 aaKnown RBP12.24□□□□□ -0.45
Ubd-201ENSMUST00000038844 Zranb1Q7M760 708 aa12.24□□□□□ -0.45
Ubd-201ENSMUST00000038844 P3h3Q8CG70 732 aa12.23□□□□□ -0.45
Ubd-201ENSMUST00000038844 Stk24Q99KH8 431 aa12.23□□□□□ -0.45
Ubd-201ENSMUST00000038844 Med1Q925J9 1575 aa12.22□□□□□ -0.45
Ubd-201ENSMUST00000038844 Atp7aQ64430 1491 aa12.22□□□□□ -0.45
Ubd-201ENSMUST00000038844 Znf710Q3U288 666 aa12.22□□□□□ -0.45
Ubd-201ENSMUST00000038844 Edc4Q3UJB9 1406 aaKnown RBP12.21□□□□□ -0.45
Ubd-201ENSMUST00000038844 Iqgap1Q9JKF1 1657 aaKnown RBP12.21□□□□□ -0.45
Ubd-201ENSMUST00000038844 Prrc2bQ7TPM1 1486 aaKnown RBP12.21□□□□□ -0.46
Ubd-201ENSMUST00000038844 Iqgap3F8VQ29 1632 aa12.2□□□□□ -0.46
Ubd-201ENSMUST00000038844 Gli3Q61602 1583 aa12.19□□□□□ -0.46
Ubd-201ENSMUST00000038844 Hspa1lP16627 641 aa12.19□□□□□ -0.46
Ubd-201ENSMUST00000038844 Sra1Q80VJ2 232 aa12.19□□□□□ -0.46
Ubd-201ENSMUST00000038844 Itsn1Q9Z0R4 1714 aa12.19□□□□□ -0.46
Ubd-201ENSMUST00000038844 Ppip5k1A2ARP1 1436 aa12.19□□□□□ -0.46
Ubd-201ENSMUST00000038844 Pik3r4Q8VD65 1358 aa12.18□□□□□ -0.46
Ubd-201ENSMUST00000038844 Tcf3P15806 651 aa12.18□□□□□ -0.46
Ubd-201ENSMUST00000038844 Mroh1E0CZ22 1640 aa12.16□□□□□ -0.46
Ubd-201ENSMUST00000038844 AatkQ80YE4 1365 aa12.16□□□□□ -0.46
Ubd-201ENSMUST00000038844 Ankrd36D3Z4K0 1415 aa12.15□□□□□ -0.46
Ubd-201ENSMUST00000038844 Zc3h13E9Q784 1729 aaKnown RBP12.14□□□□□ -0.47
Ubd-201ENSMUST00000038844 Mroh3A0A1D5RM54 893 aa12.14□□□□□ -0.47
Ubd-201ENSMUST00000038844 Pkd2O35245 966 aa12.14□□□□□ -0.47
Ubd-201ENSMUST00000038844 Bcl11bQ99PV8 884 aa12.14□□□□□ -0.47
Ubd-201ENSMUST00000038844 Pik3c2gO70167 1506 aa12.13□□□□□ -0.47
Ubd-201ENSMUST00000038844 Dhx9O70133 1380 aaKnown RBP12.13□□□□□ -0.47
Ubd-201ENSMUST00000038844 Slit3Q9WVB4 1523 aa12.12□□□□□ -0.47
Ubd-201ENSMUST00000038844 Myo3aQ8K3H5 1613 aa12.12□□□□□ -0.47
Ubd-201ENSMUST00000038844 Kif13aQ9EQW7 1749 aa12.12□□□□□ -0.47
Ubd-201ENSMUST00000038844 Atp1b4Q99ME6 356 aa12.12□□□□□ -0.47
Ubd-201ENSMUST00000038844 Slc52a2Q9D8F3 450 aa12.12□□□□□ -0.47
Ubd-201ENSMUST00000038844 Rock1P70335 1354 aa12.12□□□□□ -0.47
Ubd-201ENSMUST00000038844 Eif2ak4Q9QZ05 1648 aa12.11□□□□□ -0.47
Ubd-201ENSMUST00000038844 Tom1O88746 492 aa12.11□□□□□ -0.47
Ubd-201ENSMUST00000038844 Abca8aQ8K442 1620 aa12.11□□□□□ -0.47
Retrieved 100 of 22,080 RNA–protein pairs in 40.4 ms