RNA–Protein interactions for RNA: ENSMUST00000038844.6

Ubd-201, Transcript of Ubiquitin D, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubd, Length 931 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubd-201ENSMUST00000038844 Mapk8ip2Q9ERE9 830 aa24.27■■□□□ 1.48
Ubd-201ENSMUST00000038844 Chic1Q8CBW7 227 aa24.21■■□□□ 1.47
Ubd-201ENSMUST00000038844 Phf23Q8BSN5 401 aa21.49■■□□□ 1.03
Ubd-201ENSMUST00000038844 Gab3Q8BSM5 595 aa20.5■□□□□ 0.87
Ubd-201ENSMUST00000038844 Plppr3Q7TPB0 716 aa20.27■□□□□ 0.84
Ubd-201ENSMUST00000038844 Senp3Q9EP97 568 aaKnown RBP19.47■□□□□ 0.71
Ubd-201ENSMUST00000038844 Gm35339A0A140LHH9 1649 aa18.74■□□□□ 0.59
Ubd-201ENSMUST00000038844 NischQ80TM9 1593 aa18.54■□□□□ 0.56
Ubd-201ENSMUST00000038844 Fam163aQ8CAA5 168 aa18.32■□□□□ 0.52
Ubd-201ENSMUST00000038844 Abcc8B2RUS7 1588 aa17.94■□□□□ 0.46
Ubd-201ENSMUST00000038844 Abcc9P70170 1546 aa17.93■□□□□ 0.46
Ubd-201ENSMUST00000038844 Kcna4Q61423 654 aa17.8■□□□□ 0.44
Ubd-201ENSMUST00000038844 Hoxd11P23813 323 aa17.5■□□□□ 0.39
Ubd-201ENSMUST00000038844 Trap1aP19473 224 aa17.29■□□□□ 0.36
Ubd-201ENSMUST00000038844 ScribQ80U72 1612 aa17.18■□□□□ 0.34
Ubd-201ENSMUST00000038844 Znf219Q6IQX8 726 aa17.02■□□□□ 0.32
Ubd-201ENSMUST00000038844 ArsiQ32KI9 573 aa16.88■□□□□ 0.29
Ubd-201ENSMUST00000038844 NacadQ5SWP3 1504 aa16.86■□□□□ 0.29
Ubd-201ENSMUST00000038844 Kdm5dQ62240 1548 aa16.7■□□□□ 0.26
Ubd-201ENSMUST00000038844 Dcaf1Q80TR8 1506 aa16.64■□□□□ 0.25
Ubd-201ENSMUST00000038844 Chrna2Q91X60 512 aa16.49■□□□□ 0.23
Ubd-201ENSMUST00000038844 Sycp2Q9CUU3 1500 aa16.49■□□□□ 0.23
Ubd-201ENSMUST00000038844 Rsph4aQ8BYM7 716 aa16.42■□□□□ 0.22
Ubd-201ENSMUST00000038844 Dnajc5bQ9CQ94 199 aa16.4■□□□□ 0.22
Ubd-201ENSMUST00000038844 Slc34a2Q9DBP0 697 aa16.36■□□□□ 0.21
Ubd-201ENSMUST00000038844 BicraF8VPZ9 1578 aa16.13■□□□□ 0.17
Ubd-201ENSMUST00000038844 Rimbp2Q80U40 1072 aa16.13■□□□□ 0.17
Ubd-201ENSMUST00000038844 Akt1s1Q9D1F4 257 aa16.13■□□□□ 0.17
Ubd-201ENSMUST00000038844 Rb1cc1Q9ESK9 1588 aa16.12■□□□□ 0.17
Ubd-201ENSMUST00000038844 Crybg2B7ZCC2 1516 aa16.05■□□□□ 0.16
Ubd-201ENSMUST00000038844 Rhox8Q6VSS7 320 aa16.01■□□□□ 0.15
Ubd-201ENSMUST00000038844 Pds5bQ4VA53 1446 aaKnown RBP15.94■□□□□ 0.14
Ubd-201ENSMUST00000038844 Baz1aO88379 1555 aa15.94■□□□□ 0.14
Ubd-201ENSMUST00000038844 Ccdc180J3QNE4 1664 aa15.94■□□□□ 0.14
Ubd-201ENSMUST00000038844 Dmrt2Q8BG36 561 aa15.89■□□□□ 0.13
Ubd-201ENSMUST00000038844 GapdhsQ64467 440 aa15.86■□□□□ 0.13
Ubd-201ENSMUST00000038844 Atad2bE9Q166 1460 aaKnown RBP15.74■□□□□ 0.11
Ubd-201ENSMUST00000038844 Zcchc6Q5BLK4 1491 aaKnown RBP15.71■□□□□ 0.11
Ubd-201ENSMUST00000038844 Thoc2B1AZI6 1594 aaKnown RBP15.65■□□□□ 0.1
Ubd-201ENSMUST00000038844 Ercc6F8VPZ5 1481 aa15.56■□□□□ 0.08
Ubd-201ENSMUST00000038844 Smarca4Q3TKT4 1613 aaKnown RBP15.5■□□□□ 0.07
Ubd-201ENSMUST00000038844 Smarca2Q6DIC0 1577 aa15.47■□□□□ 0.07
Ubd-201ENSMUST00000038844 Baz1bQ9Z277 1479 aa15.46■□□□□ 0.07
Ubd-201ENSMUST00000038844 Iqgap2Q3UQ44 1575 aa15.4■□□□□ 0.06
Ubd-201ENSMUST00000038844 Cc2d2aQ8CFW7 1633 aa15.36■□□□□ 0.05
Ubd-201ENSMUST00000038844 Cecr2E9Q2Z1 1453 aa15.35■□□□□ 0.05
Ubd-201ENSMUST00000038844 Fam135aQ6NS59 1506 aa15.34■□□□□ 0.05
Ubd-201ENSMUST00000038844 Hs6st3Q9QYK4 470 aa15.34■□□□□ 0.05
Ubd-201ENSMUST00000038844 Phldb1Q6PDH0 1371 aaKnown RBP15.34■□□□□ 0.05
Ubd-201ENSMUST00000038844 Ppp4r2Q0VGB7 417 aa15.3■□□□□ 0.04
Ubd-201ENSMUST00000038844 Wdr62Q3U3T8 1523 aa15.3■□□□□ 0.04
Ubd-201ENSMUST00000038844 Atf5O70191 283 aa15.26■□□□□ 0.03
Ubd-201ENSMUST00000038844 Frmpd1A2AKB4 1549 aa15.26■□□□□ 0.03
Ubd-201ENSMUST00000038844 Brd4Q9ESU6 1400 aaKnown RBP15.17■□□□□ 0.02
Ubd-201ENSMUST00000038844 Ubl4bQ9CQ84 188 aa15.16■□□□□ 0.02
Ubd-201ENSMUST00000038844 Sox12Q04890 314 aa15.14■□□□□ 0.01
Ubd-201ENSMUST00000038844 CftrP26361 1476 aa15.11■□□□□ 0.01
Ubd-201ENSMUST00000038844 Znf704Q9ERQ3 566 aa15.09■□□□□ 0.01
Ubd-201ENSMUST00000038844 Slc4a5E9Q3M5 1116 aa15.05■□□□□ -0
Ubd-201ENSMUST00000038844 Cttnbp2B9EJA2 1648 aa15.04■□□□□ -0
Ubd-201ENSMUST00000038844 Mrc2Q64449 1479 aa15.02■□□□□ -0
Ubd-201ENSMUST00000038844 Rtl1Q7M732 1744 aa15.01□□□□□ -0.01
Ubd-201ENSMUST00000038844 Slc4a1apE9PX68 744 aa14.99□□□□□ -0.01
Ubd-201ENSMUST00000038844 Synj1Q8CHC4 1574 aa14.95□□□□□ -0.02
Ubd-201ENSMUST00000038844 Bach1P97302 739 aa14.94□□□□□ -0.02
Ubd-201ENSMUST00000038844 Ccdc136Q3TVA9 1136 aa14.94□□□□□ -0.02
Ubd-201ENSMUST00000038844 Trim41Q5NCC3 630 aa14.92□□□□□ -0.02
Ubd-201ENSMUST00000038844 Esf1Q3V1V3 845 aaKnown RBP14.91□□□□□ -0.02
Ubd-201ENSMUST00000038844 Ppargc1bQ8VHJ7 1014 aa14.86□□□□□ -0.03
Ubd-201ENSMUST00000038844 Rsf1E9PWW9 1441 aaKnown RBP14.85□□□□□ -0.03
Ubd-201ENSMUST00000038844 Unc13aQ4KUS2 1712 aa14.79□□□□□ -0.04
Ubd-201ENSMUST00000038844 Kif15Q6P9L6 1387 aa14.77□□□□□ -0.04
Ubd-201ENSMUST00000038844 Cux2P70298 1426 aa14.76□□□□□ -0.05
Ubd-201ENSMUST00000038844 Npm1Q61937 292 aaKnown RBP14.7□□□□□ -0.06
Ubd-201ENSMUST00000038844 Lamc3Q9R0B6 1581 aa14.65□□□□□ -0.06
Ubd-201ENSMUST00000038844 Cep164Q5DU05 1446 aa14.63□□□□□ -0.07
Ubd-201ENSMUST00000038844 Ccdc18Q640L5 1455 aa14.57□□□□□ -0.08
Ubd-201ENSMUST00000038844 1700123L14RikQ3V2K7 440 aa14.54□□□□□ -0.08
Ubd-201ENSMUST00000038844 Lrriq1Q0P5X1 1673 aa14.53□□□□□ -0.08
Ubd-201ENSMUST00000038844 Golga3P55937 1487 aa14.52□□□□□ -0.08
Ubd-201ENSMUST00000038844 Grwd1Q810D6 446 aaKnown RBP14.5□□□□□ -0.09
Ubd-201ENSMUST00000038844 Dnajc5P60904 198 aa14.49□□□□□ -0.09
Ubd-201ENSMUST00000038844 WdpcpQ8C456 722 aa14.49□□□□□ -0.09
Ubd-201ENSMUST00000038844 Kif21aQ9QXL2 1672 aa14.48□□□□□ -0.09
Ubd-201ENSMUST00000038844 LrpprcQ6PB66 1392 aaKnown RBP14.47□□□□□ -0.09
Ubd-201ENSMUST00000038844 Egfem1Q8C088 590 aa14.46□□□□□ -0.09
Ubd-201ENSMUST00000038844 Dhx29Q6PGC1 1365 aaKnown RBP14.46□□□□□ -0.1
Ubd-201ENSMUST00000038844 TnnQ80Z71 1560 aa14.43□□□□□ -0.1
Ubd-201ENSMUST00000038844 Cngb1E1AZ71 1325 aa14.42□□□□□ -0.1
Ubd-201ENSMUST00000038844 Ifnlr1Q8CGK5 535 aa14.42□□□□□ -0.1
Ubd-201ENSMUST00000038844 Eif4g3Q80XI3 1579 aaKnown RBP14.42□□□□□ -0.1
Ubd-201ENSMUST00000038844 Fmn1Q05860 1466 aa14.4□□□□□ -0.1
Ubd-201ENSMUST00000038844 Shroom2A2ALU4 1481 aa14.39□□□□□ -0.11
Ubd-201ENSMUST00000038844 Il27Q8K3I6 234 aa14.39□□□□□ -0.11
Ubd-201ENSMUST00000038844 Top2bQ64511 1612 aa14.39□□□□□ -0.11
Ubd-201ENSMUST00000038844 Urb2E9Q7L1 1524 aaKnown RBP14.37□□□□□ -0.11
Ubd-201ENSMUST00000038844 Plb1Q3TTY0 1478 aa14.37□□□□□ -0.11
Ubd-201ENSMUST00000038844 Camsap1A2AHC3 1581 aa14.35□□□□□ -0.11
Ubd-201ENSMUST00000038844 PogzQ8BZH4 1409 aaKnown RBP14.35□□□□□ -0.11
Ubd-201ENSMUST00000038844 Ift140E9PY46 1464 aa14.35□□□□□ -0.11
Retrieved 100 of 22,080 RNA–protein pairs in 109.3 ms