RNA–Protein interactions for RNA: YPR038W

IRC16, Transcript of Dubious open reading frame, yeast

Gene IRC16, Length 360 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
IRC16	YPR038W	POP3	P53833	195 aa	Predicted RBP	0.87	□□□□□ -2.27
IRC16	YPR038W	FSF1	Q12029	327 aa	Known RBP	0.87	□□□□□ -2.27
IRC16	YPR038W	YNL146C-A	Q3E7Z1	64 aa		0.87	□□□□□ -2.27
IRC16	YPR038W	DRS2	P39524	1355 aa		0.86	□□□□□ -2.27
IRC16	YPR038W	SHE2	P36068	246 aa	Known RBP RIP-Chip data	0.86	□□□□□ -2.27	not detected
IRC16	YPR038W	SKG1	P36169	355 aa		0.86	□□□□□ -2.27
IRC16	YPR038W	MRPL17	P36528	281 aa		0.86	□□□□□ -2.27
IRC16	YPR038W	FMC1	P40491	155 aa		0.86	□□□□□ -2.27
IRC16	YPR038W	RPL37A	P49166	88 aa	Known RBP	0.86	□□□□□ -2.27
IRC16	YPR038W	YNL134C	P53912	376 aa	Known RBP	0.86	□□□□□ -2.27
IRC16	YPR038W	SRL4	Q03085	281 aa		0.86	□□□□□ -2.27
IRC16	YPR038W	GAS3	Q03655	524 aa		0.86	□□□□□ -2.27
IRC16	YPR038W	RRT8	Q08219	342 aa		0.86	□□□□□ -2.27
IRC16	YPR038W	GPM2	Q12008	311 aa		0.86	□□□□□ -2.27
IRC16	YPR038W	ATG40	Q99325	256 aa		0.86	□□□□□ -2.27
IRC16	YPR038W	TUS1	Q06412	1307 aa		0.86	□□□□□ -2.27
IRC16	YPR038W	RPO26	P20435	155 aa		0.85	□□□□□ -2.27
IRC16	YPR038W	CDC10	P25342	322 aa	Known RBP	0.85	□□□□□ -2.27
IRC16	YPR038W	RPT5	P33297	434 aa	Known RBP	0.85	□□□□□ -2.27
IRC16	YPR038W	NTF2	P33331	125 aa	Known RBP	0.85	□□□□□ -2.27
IRC16	YPR038W	PRE6	P40303	254 aa	Known RBP	0.85	□□□□□ -2.27
IRC16	YPR038W	KNH1	P50112	268 aa		0.85	□□□□□ -2.27
IRC16	YPR038W	COX15	P40086	486 aa		0.84	□□□□□ -2.27
IRC16	YPR038W	GVP36	P40531	326 aa	Known RBP	0.84	□□□□□ -2.27
IRC16	YPR038W	YLR283W	Q05867	314 aa		0.84	□□□□□ -2.27
IRC16	YPR038W	TIM9	O74700	87 aa		0.83	□□□□□ -2.28
IRC16	YPR038W	YER188C-A	P0C0V2	99 aa		0.83	□□□□□ -2.28
IRC16	YPR038W	URA6	P15700	204 aa		0.83	□□□□□ -2.28
IRC16	YPR038W	SSO1	P32867	290 aa		0.83	□□□□□ -2.28
IRC16	YPR038W	LDB7	P38210	180 aa		0.83	□□□□□ -2.28
IRC16	YPR038W	YEL067C	P39978	195 aa		0.83	□□□□□ -2.28
IRC16	YPR038W	FYV6	P53913	173 aa		0.83	□□□□□ -2.28
IRC16	YPR038W	RCE1	Q03530	315 aa		0.83	□□□□□ -2.28
IRC16	YPR038W	CDC123	Q05791	360 aa		0.83	□□□□□ -2.28
IRC16	YPR038W	PBN1	P25580	416 aa		0.82	□□□□□ -2.28
IRC16	YPR038W	OPY1	P38271	328 aa		0.82	□□□□□ -2.28
IRC16	YPR038W	YBR285W	P38354	144 aa		0.82	□□□□□ -2.28
IRC16	YPR038W	SIP3	P38717	1229 aa		0.82	□□□□□ -2.28
IRC16	YPR038W	EDC3	P39998	551 aa	Known RBP	0.82	□□□□□ -2.28
IRC16	YPR038W	FAR7	P43592	221 aa		0.82	□□□□□ -2.28
IRC16	YPR038W	RPC17	P47076	161 aa		0.82	□□□□□ -2.28
IRC16	YPR038W	TDA8	Q6B2U8	126 aa		0.82	□□□□□ -2.28
IRC16	YPR038W	YCR016W	P25617	290 aa	Known RBP	0.81	□□□□□ -2.28
IRC16	YPR038W	SRY1	P36007	326 aa		0.81	□□□□□ -2.28
IRC16	YPR038W	SOK1	P40317	901 aa		0.81	□□□□□ -2.28
IRC16	YPR038W	YAE1	P47118	141 aa	Predicted RBP	0.81	□□□□□ -2.28
IRC16	YPR038W	LIA1	P47120	325 aa	Known RBP	0.81	□□□□□ -2.28
IRC16	YPR038W	EAF6	P47128	113 aa		0.81	□□□□□ -2.28
IRC16	YPR038W	MIC26	P50087	233 aa		0.81	□□□□□ -2.28
IRC16	YPR038W	BRR6	P53062	197 aa		0.81	□□□□□ -2.28
IRC16	YPR038W	ARO8	P53090	500 aa	Known RBP	0.81	□□□□□ -2.28
IRC16	YPR038W	CUE4	Q04201	117 aa	Predicted RBP	0.81	□□□□□ -2.28
IRC16	YPR038W	YHR007C-A	Q07074	71 aa		0.81	□□□□□ -2.28
IRC16	YPR038W	MCP1	Q12106	302 aa		0.81	□□□□□ -2.28
IRC16	YPR038W	YLR236C	A0A023PZG4	107 aa		0.8	□□□□□ -2.28
IRC16	YPR038W	DBF2	P22204	572 aa		0.8	□□□□□ -2.28
IRC16	YPR038W	SEC17	P32602	292 aa		0.8	□□□□□ -2.28
IRC16	YPR038W	FLX1	P40464	311 aa		0.8	□□□□□ -2.28
IRC16	YPR038W	RPL37B	P51402	88 aa	Known RBP	0.8	□□□□□ -2.28
IRC16	YPR038W	PET117	Q02771	107 aa		0.8	□□□□□ -2.28
IRC16	YPR038W	ACC1	Q00955	2233 aa	Known RBP	0.79	□□□□□ -2.28
IRC16	YPR038W	CDC28	P00546	298 aa	Known RBP	0.79	□□□□□ -2.28
IRC16	YPR038W	SIR2	P06700	562 aa		0.79	□□□□□ -2.28
IRC16	YPR038W	AQY2	P0CD90	149 aa		0.79	□□□□□ -2.28
IRC16	YPR038W	URA5	P13298	226 aa	Known RBP	0.79	□□□□□ -2.28
IRC16	YPR038W	NSP1	P14907	823 aa	Known RBP	0.79	□□□□□ -2.28
IRC16	YPR038W	SEC11	P15367	167 aa		0.79	□□□□□ -2.28
IRC16	YPR038W	TCA17	P32613	152 aa		0.79	□□□□□ -2.28
IRC16	YPR038W	APS1	P35181	156 aa		0.79	□□□□□ -2.28
IRC16	YPR038W	HUA1	P40325	198 aa		0.79	□□□□□ -2.28
IRC16	YPR038W	BXI1	P48558	297 aa		0.79	□□□□□ -2.28
IRC16	YPR038W	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	0.79	□□□□□ -2.28	not detected
IRC16	YPR038W	CWC27	Q02770	301 aa		0.79	□□□□□ -2.28
IRC16	YPR038W	MSN4	P33749	630 aa		0.78	□□□□□ -2.28
IRC16	YPR038W	YHL042W	P38729	150 aa		0.78	□□□□□ -2.28
IRC16	YPR038W	AST2	P39945	430 aa	Known RBP	0.78	□□□□□ -2.28
IRC16	YPR038W	AIM36	Q03798	255 aa		0.78	□□□□□ -2.28
IRC16	YPR038W	RAD28	Q12021	506 aa		0.78	□□□□□ -2.28
IRC16	YPR038W	BET1	P22804	142 aa		0.77	□□□□□ -2.29
IRC16	YPR038W	UTP30	P36144	274 aa	Known RBP	0.77	□□□□□ -2.29
IRC16	YPR038W	RMD6	P39975	231 aa		0.77	□□□□□ -2.29
IRC16	YPR038W	YER034W	P40022	185 aa	Known RBP	0.77	□□□□□ -2.29
IRC16	YPR038W	YFL065C	P43539	102 aa		0.77	□□□□□ -2.29
IRC16	YPR038W	YDR249C	Q03787	373 aa		0.77	□□□□□ -2.29
IRC16	YPR038W	MATALPHA1	P0CY06	175 aa		0.76	□□□□□ -2.29
IRC16	YPR038W	HMLALPHA1	P0CY07	175 aa		0.76	□□□□□ -2.29
IRC16	YPR038W	KSS1	P14681	368 aa		0.76	□□□□□ -2.29
IRC16	YPR038W	VMA6	P32366	345 aa	Known RBP	0.76	□□□□□ -2.29
IRC16	YPR038W	ECM4	P36156	370 aa		0.76	□□□□□ -2.29
IRC16	YPR038W	YNL247W	P53852	767 aa	Known RBP	0.76	□□□□□ -2.29
IRC16	YPR038W	RRN5	Q02983	363 aa		0.76	□□□□□ -2.29
IRC16	YPR038W	INO80	P53115	1489 aa		0.75	□□□□□ -2.29
IRC16	YPR038W	RPL24B	P24000	155 aa	Known RBP	0.75	□□□□□ -2.29
IRC16	YPR038W	IDH1	P28834	360 aa	Known RBP RIP-Chip data	0.75	□□□□□ -2.29	not detected
IRC16	YPR038W	PTM1	P32857	523 aa		0.75	□□□□□ -2.29
IRC16	YPR038W	RPB3	P16370	318 aa	Known RBP	0.74	□□□□□ -2.29
IRC16	YPR038W	VMA22	P38784	181 aa		0.74	□□□□□ -2.29
IRC16	YPR038W	HYR1	P40581	163 aa	Known RBP	0.74	□□□□□ -2.29
IRC16	YPR038W	YGR050C	P53231	118 aa		0.74	□□□□□ -2.29
IRC16	YPR038W	YDR274C	P87283	123 aa		0.74	□□□□□ -2.29

Retrieved 100 of 5,963 RNA–protein pairs in 52.4 ms