RNA–Protein interactions for RNA: YLR402W

YLR402W, Transcript of Dubious open reading frame, yeast

Gene YLR402W, Length 192 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YLR402W	YLR402W	TRM12	Q04235	462 aa		3.05	□□□□□ -1.92
YLR402W	YLR402W	ABP140	Q08641	628 aa	Known RBP	3.05	□□□□□ -1.92
YLR402W	YLR402W	YCL012C	Q8J0M4	134 aa		3.05	□□□□□ -1.92
YLR402W	YLR402W	REP2	P03872	296 aa		3.04	□□□□□ -1.92
YLR402W	YLR402W	MDH3	P32419	343 aa	Known RBP RIP-Chip data	3.04	□□□□□ -1.92	not detected
YLR402W	YLR402W	TRM5	P38793	499 aa		3.04	□□□□□ -1.92
YLR402W	YLR402W	YGR219W	P53307	113 aa		3.04	□□□□□ -1.92
YLR402W	YLR402W	DAD3	P69850	94 aa		3.04	□□□□□ -1.92
YLR402W	YLR402W	GAS3	Q03655	524 aa		3.04	□□□□□ -1.92
YLR402W	YLR402W	YPK2	P18961	677 aa		3.03	□□□□□ -1.92
YLR402W	YLR402W	YHR180W	P38868	163 aa		3.03	□□□□□ -1.92
YLR402W	YLR402W	RMD6	P39975	231 aa		3.03	□□□□□ -1.92
YLR402W	YLR402W	CIS3	P47001	227 aa		3.03	□□□□□ -1.92
YLR402W	YLR402W	DAN1	P47178	298 aa		3.03	□□□□□ -1.92
YLR402W	YLR402W	NOP19	P53317	196 aa	Predicted RBP	3.03	□□□□□ -1.92
YLR402W	YLR402W	SNZ1	Q03148	297 aa		3.03	□□□□□ -1.92
YLR402W	YLR402W	CDC7	P06243	507 aa		3.02	□□□□□ -1.93
YLR402W	YLR402W	RPL27A	P0C2H6	136 aa	Known RBP	3.02	□□□□□ -1.93
YLR402W	YLR402W	RPL27B	P0C2H7	136 aa	Known RBP	3.02	□□□□□ -1.93
YLR402W	YLR402W	YLR156W	P0CE96	114 aa		3.02	□□□□□ -1.93
YLR402W	YLR402W	YLR159W	P0CE97	114 aa		3.02	□□□□□ -1.93
YLR402W	YLR402W	YLR161W	P0CE98	114 aa		3.02	□□□□□ -1.93
YLR402W	YLR402W	MER1	P16523	270 aa		3.02	□□□□□ -1.93
YLR402W	YLR402W	PEX4	P29340	183 aa		3.02	□□□□□ -1.93
YLR402W	YLR402W	PRM10	P42946	383 aa		3.02	□□□□□ -1.93
YLR402W	YLR402W	LSM7	P53905	115 aa	Known RBP	3.02	□□□□□ -1.93
YLR402W	YLR402W	PET191	Q02772	108 aa		3.02	□□□□□ -1.93
YLR402W	YLR402W	MRPS8	Q03799	155 aa		3.02	□□□□□ -1.93
YLR402W	YLR402W	QCR7	P00128	127 aa		3.01	□□□□□ -1.93
YLR402W	YLR402W	PTM1	P32857	523 aa		3.01	□□□□□ -1.93
YLR402W	YLR402W	SKG1	P36169	355 aa		3.01	□□□□□ -1.93
YLR402W	YLR402W	MRPL28	P36527	147 aa		3.01	□□□□□ -1.93
YLR402W	YLR402W	AIF1	P52923	378 aa		3.01	□□□□□ -1.93
YLR402W	YLR402W	YGR050C	P53231	118 aa		3.01	□□□□□ -1.93
YLR402W	YLR402W	MDM32	Q12171	622 aa		3.01	□□□□□ -1.93
YLR402W	YLR402W	YHR214C-E	Q8TGK0	99 aa		3.01	□□□□□ -1.93
YLR402W	YLR402W	RPL25	P04456	142 aa	Known RBP	3	□□□□□ -1.93
YLR402W	YLR402W	AST2	P39945	430 aa	Known RBP	3	□□□□□ -1.93
YLR402W	YLR402W	YRB2	P40517	327 aa		3	□□□□□ -1.93
YLR402W	YLR402W	YJL027C	P47063	138 aa	Predicted RBP	3	□□□□□ -1.93
YLR402W	YLR402W	GIM3	P53900	129 aa		3	□□□□□ -1.93
YLR402W	YLR402W	MEU1	Q07938	337 aa	Known RBP RIP-Chip data	3	□□□□□ -1.93	not detected
YLR402W	YLR402W	SEC17	P32602	292 aa		2.99	□□□□□ -1.93
YLR402W	YLR402W	YPL162C	Q12042	273 aa		2.99	□□□□□ -1.93
YLR402W	YLR402W	RAD9	P14737	1309 aa		2.98	□□□□□ -1.93
YLR402W	YLR402W	FBA1	P14540	359 aa	Known RBP	2.98	□□□□□ -1.93
YLR402W	YLR402W	SCL1	P21243	252 aa	Known RBP	2.98	□□□□□ -1.93
YLR402W	YLR402W	MAG1	P22134	296 aa	Known RBP	2.98	□□□□□ -1.93
YLR402W	YLR402W	MEI4	P29467	408 aa		2.98	□□□□□ -1.93
YLR402W	YLR402W	UTP30	P36144	274 aa	Known RBP	2.98	□□□□□ -1.93
YLR402W	YLR402W	PHO88	P38264	188 aa	Predicted RBP	2.98	□□□□□ -1.93
YLR402W	YLR402W	ERV15	P38312	142 aa		2.98	□□□□□ -1.93
YLR402W	YLR402W	PGD1	P40356	397 aa		2.98	□□□□□ -1.93
YLR402W	YLR402W	MMS2	P53152	137 aa		2.98	□□□□□ -1.93
YLR402W	YLR402W	SWP1	Q02795	286 aa		2.98	□□□□□ -1.93
YLR402W	YLR402W	SPG3	Q04398	127 aa	Predicted RBP	2.98	□□□□□ -1.93
YLR402W	YLR402W	USB1	Q12208	290 aa	Known RBP	2.98	□□□□□ -1.93
YLR402W	YLR402W	KSS1	P14681	368 aa		2.97	□□□□□ -1.93
YLR402W	YLR402W	NRG2	P38082	220 aa		2.97	□□□□□ -1.93
YLR402W	YLR402W	YKE4	P40544	346 aa		2.97	□□□□□ -1.93
YLR402W	YLR402W	COG5	P53951	403 aa		2.97	□□□□□ -1.93
YLR402W	YLR402W	MCP1	Q12106	302 aa		2.97	□□□□□ -1.93
YLR402W	YLR402W	TSC3	Q3E790	80 aa		2.97	□□□□□ -1.93
YLR402W	YLR402W	MRPS28	P21771	286 aa		2.96	□□□□□ -1.94
YLR402W	YLR402W	HMF1	P40037	129 aa	Known RBP	2.96	□□□□□ -1.94
YLR402W	YLR402W	FCY21	P40039	528 aa		2.96	□□□□□ -1.94
YLR402W	YLR402W	RPL33B	P41056	107 aa	Known RBP	2.96	□□□□□ -1.94
YLR402W	YLR402W	AIM25	P47140	327 aa		2.95	□□□□□ -1.94
YLR402W	YLR402W	YNR062C	P53748	327 aa		2.95	□□□□□ -1.94
YLR402W	YLR402W	YDR249C	Q03787	373 aa		2.95	□□□□□ -1.94
YLR402W	YLR402W	ATG38	Q05789	226 aa	Known RBP	2.95	□□□□□ -1.94
YLR402W	YLR402W	YOL160W	Q08321	113 aa		2.95	□□□□□ -1.94
YLR402W	YLR402W	RAS2	P01120	322 aa	Known RBP	2.94	□□□□□ -1.94
YLR402W	YLR402W	APA2	P22108	325 aa		2.94	□□□□□ -1.94
YLR402W	YLR402W	BET1	P22804	142 aa		2.94	□□□□□ -1.94
YLR402W	YLR402W	ADE1	P27616	306 aa		2.94	□□□□□ -1.94
YLR402W	YLR402W	MRPL17	P36528	281 aa		2.94	□□□□□ -1.94
YLR402W	YLR402W	ICE2	P40499	491 aa		2.94	□□□□□ -1.94
YLR402W	YLR402W	ERG25	P53045	309 aa		2.94	□□□□□ -1.94
YLR402W	YLR402W	YNG1	Q08465	219 aa		2.94	□□□□□ -1.94
YLR402W	YLR402W	YHR086W-A	Q3E746	53 aa		2.94	□□□□□ -1.94
YLR402W	YLR402W	YFR032C-B	Q8TGU2	87 aa		2.94	□□□□□ -1.94
YLR402W	YLR402W	YIL177C	P40434	1758 aa		2.94	□□□□□ -1.94
YLR402W	YLR402W	YJL225C	P40889	1758 aa		2.94	□□□□□ -1.94
YLR402W	YLR402W	IKI3	Q06706	1349 aa	Known RBP	2.93	□□□□□ -1.94
YLR402W	YLR402W	TIM9	O74700	87 aa		2.93	□□□□□ -1.94
YLR402W	YLR402W	URA5	P13298	226 aa	Known RBP	2.93	□□□□□ -1.94
YLR402W	YLR402W	PET9	P18239	318 aa	Known RBP	2.93	□□□□□ -1.94
YLR402W	YLR402W	GGA1	Q06336	557 aa		2.93	□□□□□ -1.94
YLR402W	YLR402W	RPB3	P16370	318 aa	Known RBP	2.92	□□□□□ -1.94
YLR402W	YLR402W	UMP1	P38293	148 aa		2.92	□□□□□ -1.94
YLR402W	YLR402W	YHR022C	P38763	256 aa		2.92	□□□□□ -1.94
YLR402W	YLR402W	CYT2	Q00873	224 aa		2.92	□□□□□ -1.94
YLR402W	YLR402W	CHD1	P32657	1468 aa		2.91	□□□□□ -1.94
YLR402W	YLR402W	MRS1	P07266	363 aa		2.91	□□□□□ -1.94
YLR402W	YLR402W	TIR3	P40552	269 aa		2.91	□□□□□ -1.94
YLR402W	YLR402W	DOC1	P53068	250 aa		2.91	□□□□□ -1.94
YLR402W	YLR402W	SIR2	P06700	562 aa		2.9	□□□□□ -1.95
YLR402W	YLR402W	ASF2	P32448	525 aa	Predicted RBP	2.9	□□□□□ -1.95
YLR402W	YLR402W	SVP26	P38869	228 aa		2.9	□□□□□ -1.95

Retrieved 100 of 5,963 RNA–protein pairs in 25.4 ms