RNA–Protein interactions for RNA: YLR397C

AFG2, Transcript of ATPase of the CDC48/PAS1/SEC18 (AAA) family, forms a hexameric complex, yeastyeast

Gene AFG2, Length 2,343 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AFG2YLR397C USB1Q12208 290 aaKnown RBP6.53□□□□□ -1.36
AFG2YLR397C YDL177CQ12257 170 aa6.53□□□□□ -1.36
AFG2YLR397C RAX2Q12465 1220 aa6.53□□□□□ -1.36
AFG2YLR397C FLO1P32768 1537 aa6.52□□□□□ -1.37
AFG2YLR397C PAC2P39937 518 aa6.52□□□□□ -1.37
AFG2YLR397C YJL028WP47062 111 aa6.52□□□□□ -1.37
AFG2YLR397C VPS25P47142 202 aa6.52□□□□□ -1.37
AFG2YLR397C YNL165WP53891 406 aa6.52□□□□□ -1.37
AFG2YLR397C YIR021W-AQ3E739 70 aa6.52□□□□□ -1.37
AFG2YLR397C YCL012CQ8J0M4 134 aa6.52□□□□□ -1.37
AFG2YLR397C MDL1P33310 695 aa6.51□□□□□ -1.37
AFG2YLR397C YER134CP40081 178 aa6.51□□□□□ -1.37
AFG2YLR397C BOL2P53082 120 aa6.51□□□□□ -1.37
AFG2YLR397C MTC7P32633 139 aa6.51□□□□□ -1.37
AFG2YLR397C MIX23P38162 196 aa6.51□□□□□ -1.37
AFG2YLR397C DOG2P38773 246 aa6.51□□□□□ -1.37
AFG2YLR397C YHR127WP38833 243 aaKnown RBP6.51□□□□□ -1.37
AFG2YLR397C RPL13BP40212 199 aaKnown RBP6.51□□□□□ -1.37
AFG2YLR397C YFL065CP43539 102 aa6.51□□□□□ -1.37
AFG2YLR397C SHS1Q07657 551 aa6.51□□□□□ -1.37
AFG2YLR397C YPR203WQ08994 102 aa6.51□□□□□ -1.37
AFG2YLR397C TY2A-LR1P0C2J4 438 aa6.5□□□□□ -1.37
AFG2YLR397C DPM1P14020 267 aaKnown RBP6.5□□□□□ -1.37
AFG2YLR397C TY2A-CP25383 438 aa6.5□□□□□ -1.37
AFG2YLR397C MAC1P35192 417 aa6.5□□□□□ -1.37
AFG2YLR397C UBS1P38290 277 aa6.5□□□□□ -1.37
AFG2YLR397C DER1P38307 211 aa6.5□□□□□ -1.37
AFG2YLR397C YPS6P40583 537 aa6.5□□□□□ -1.37
AFG2YLR397C IGO1P53897 168 aa6.5□□□□□ -1.37
AFG2YLR397C HHT1P61830 136 aa6.5□□□□□ -1.37
AFG2YLR397C TY2A-DR2Q03483 438 aa6.5□□□□□ -1.37
AFG2YLR397C NAT3Q06504 195 aa6.5□□□□□ -1.37
AFG2YLR397C LOA1Q06508 300 aa6.5□□□□□ -1.37
AFG2YLR397C YDR215CQ12240 137 aa6.5□□□□□ -1.37
AFG2YLR397C TY2A-BQ12260 438 aa6.5□□□□□ -1.37
AFG2YLR397C TY2A-OR2Q12293 438 aa6.5□□□□□ -1.37
AFG2YLR397C TY2A-DR1Q12392 438 aa6.5□□□□□ -1.37
AFG2YLR397C TY2A-OR1Q12439 438 aa6.5□□□□□ -1.37
AFG2YLR397C TY2A-DR3Q99303 438 aa6.5□□□□□ -1.37
AFG2YLR397C STT4P37297 1900 aa6.5□□□□□ -1.37
AFG2YLR397C PMU1P36069 295 aa6.5□□□□□ -1.37
AFG2YLR397C POP8P38208 133 aa6.5□□□□□ -1.37
AFG2YLR397C DOG1P38774 246 aa6.5□□□□□ -1.37
AFG2YLR397C OXA1P39952 402 aa6.5□□□□□ -1.37
AFG2YLR397C MTM1P53320 366 aa6.5□□□□□ -1.37
AFG2YLR397C DUG3P53871 357 aa6.5□□□□□ -1.37
AFG2YLR397C NRG1Q03125 231 aa6.5□□□□□ -1.37
AFG2YLR397C IZH1Q03419 316 aa6.5□□□□□ -1.37
AFG2YLR397C MCT1Q12283 360 aa6.5□□□□□ -1.37
AFG2YLR397C LAA1P39526 2014 aa6.49□□□□□ -1.37
AFG2YLR397C HIP1P06775 603 aa6.49□□□□□ -1.37
AFG2YLR397C CUP2P15315 225 aa6.49□□□□□ -1.37
AFG2YLR397C NFS1P25374 497 aa6.49□□□□□ -1.37
AFG2YLR397C YMC1P32331 307 aa6.49□□□□□ -1.37
AFG2YLR397C PRP18P33411 251 aaPredicted RBP6.49□□□□□ -1.37
AFG2YLR397C TRR2P38816 342 aa6.49□□□□□ -1.37
AFG2YLR397C PRE5P40302 234 aaKnown RBP6.49□□□□□ -1.37
AFG2YLR397C YOL024WQ08172 172 aa6.49□□□□□ -1.37
AFG2YLR397C NPR1P22211 790 aa6.49□□□□□ -1.37
AFG2YLR397C ELP6Q04868 273 aa6.49□□□□□ -1.37
AFG2YLR397C CRD1Q07560 283 aa6.49□□□□□ -1.37
AFG2YLR397C PRM3Q08931 133 aa6.49□□□□□ -1.37
AFG2YLR397C BNI1P41832 1953 aa6.48□□□□□ -1.37
AFG2YLR397C ERG24P32462 438 aaKnown RBP6.48□□□□□ -1.37
AFG2YLR397C ELP4Q02884 456 aaKnown RBP6.48□□□□□ -1.37
AFG2YLR397C STE7P06784 515 aa6.48□□□□□ -1.37
AFG2YLR397C DAL82P21705 255 aa6.48□□□□□ -1.37
AFG2YLR397C MTR2P34232 184 aaKnown RBP6.48□□□□□ -1.37
AFG2YLR397C MIC12P38341 106 aa6.48□□□□□ -1.37
AFG2YLR397C SOL3P38858 249 aa6.48□□□□□ -1.37
AFG2YLR397C YJL068CP40363 299 aa6.48□□□□□ -1.37
AFG2YLR397C YIL089WP40500 205 aa6.48□□□□□ -1.37
AFG2YLR397C TTI2P47168 421 aa6.48□□□□□ -1.37
AFG2YLR397C PMT3P47190 753 aa6.48□□□□□ -1.37
AFG2YLR397C BLS1Q06071 122 aa6.48□□□□□ -1.37
AFG2YLR397C RDR1Q08904 546 aa6.48□□□□□ -1.37
AFG2YLR397C POC4Q12245 148 aaPredicted RBP6.48□□□□□ -1.37
AFG2YLR397C IZH2Q12442 317 aa6.48□□□□□ -1.37
AFG2YLR397C GSC2P40989 1895 aa6.47□□□□□ -1.37
AFG2YLR397C PMD1P32634 1753 aa6.47□□□□□ -1.37
AFG2YLR397C GAL7P08431 366 aa6.47□□□□□ -1.37
AFG2YLR397C YKR104WP0CE69 306 aa6.47□□□□□ -1.37
AFG2YLR397C PUB1P32588 453 aaKnown RBP RIP-Chip data6.47□□□□□ -1.37not detected
AFG2YLR397C ADH5P38113 351 aaKnown RBP6.47□□□□□ -1.37
AFG2YLR397C NUP53Q03790 475 aa6.47□□□□□ -1.37
AFG2YLR397C HRT1Q08273 121 aa6.47□□□□□ -1.37
AFG2YLR397C Q0010Q9ZZX9 128 aa6.47□□□□□ -1.37
AFG2YLR397C PCL1P24867 279 aa6.47□□□□□ -1.37
AFG2YLR397C OCH1P31755 480 aa6.47□□□□□ -1.37
AFG2YLR397C PEX7P39108 375 aa6.47□□□□□ -1.37
AFG2YLR397C HIT1P46973 164 aa6.47□□□□□ -1.37
AFG2YLR397C YGR015CP53208 328 aa6.47□□□□□ -1.37
AFG2YLR397C PDR17P53844 350 aa6.47□□□□□ -1.37
AFG2YLR397C YML083CQ04526 418 aa6.47□□□□□ -1.37
AFG2YLR397C YLR415CO13578 112 aa6.46□□□□□ -1.38
AFG2YLR397C RPL1AP0CX43 217 aaKnown RBP6.46□□□□□ -1.38
AFG2YLR397C RPL1BP0CX44 217 aaKnown RBP6.46□□□□□ -1.38
AFG2YLR397C RAD23P32628 398 aaKnown RBP6.46□□□□□ -1.38
AFG2YLR397C ECM33P38248 429 aaKnown RBP6.46□□□□□ -1.38
AFG2YLR397C SDS24P38314 527 aa6.46□□□□□ -1.38
Retrieved 100 of 5,963 RNA–protein pairs in 52 ms