RNA–Protein interactions for RNA: YLR055C

SPT8, Transcript of Subunit of the SAGA transcriptional regulatory complex, yeastyeast

Gene SPT8, Length 1,809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT8YLR055C FAT1P38225 669 aa9.66□□□□□ -0.86
SPT8YLR055C FLO5P38894 1075 aa9.66□□□□□ -0.86
SPT8YLR055C NOP16P40007 231 aaKnown RBP9.66□□□□□ -0.86
SPT8YLR055C SKP1P52286 194 aa9.66□□□□□ -0.86
SPT8YLR055C YMR082CQ04276 118 aa9.66□□□□□ -0.86
SPT8YLR055C AVO2Q04749 426 aa9.66□□□□□ -0.86
SPT8YLR055C SEI1Q06058 285 aa9.66□□□□□ -0.86
SPT8YLR055C MCH4Q08268 501 aa9.66□□□□□ -0.86
SPT8YLR055C TY1A-HP0C2I4 478 aaKnown RBP9.65□□□□□ -0.86
SPT8YLR055C MRPS9P38120 278 aa9.65□□□□□ -0.86
SPT8YLR055C TRS20P38334 175 aa9.65□□□□□ -0.86
SPT8YLR055C CUE4Q04201 117 aaPredicted RBP9.65□□□□□ -0.86
SPT8YLR055C TDA6Q06466 467 aa9.65□□□□□ -0.86
SPT8YLR055C YOL024WQ08172 172 aa9.65□□□□□ -0.86
SPT8YLR055C TAD3Q9URQ3 322 aa9.65□□□□□ -0.86
SPT8YLR055C CUP1-1P0CX80 61 aa9.64□□□□□ -0.87
SPT8YLR055C CUP1-2P0CX81 61 aa9.64□□□□□ -0.87
SPT8YLR055C MRPL44P19956 98 aa9.64□□□□□ -0.87
SPT8YLR055C SEC62P21825 274 aa9.64□□□□□ -0.87
SPT8YLR055C AFG1P32317 509 aa9.64□□□□□ -0.87
SPT8YLR055C YBR197CP38306 217 aa9.64□□□□□ -0.87
SPT8YLR055C XBP1P40489 647 aa9.64□□□□□ -0.87
SPT8YLR055C AIM24P47127 394 aa9.64□□□□□ -0.87
SPT8YLR055C HOL1P53389 586 aa9.64□□□□□ -0.87
SPT8YLR055C ALG12P53730 551 aa9.64□□□□□ -0.87
SPT8YLR055C YPR147CQ06522 304 aaKnown RBP9.64□□□□□ -0.87
SPT8YLR055C GCN1P33892 2672 aaKnown RBP9.64□□□□□ -0.87
SPT8YLR055C TDH3P00359 332 aaKnown RBP RIP-Chip data9.63□□□□□ -0.87not detected
SPT8YLR055C SCEIP03882 235 aa9.63□□□□□ -0.87
SPT8YLR055C YLL053CP0CD98 152 aa9.63□□□□□ -0.87
SPT8YLR055C SLM6P38343 150 aa9.63□□□□□ -0.87
SPT8YLR055C PHS1P40857 217 aa9.63□□□□□ -0.87
SPT8YLR055C ATG21Q02887 496 aa9.63□□□□□ -0.87
SPT8YLR055C FSH2Q05015 223 aa9.63□□□□□ -0.87
SPT8YLR055C CTS2Q06350 511 aa9.63□□□□□ -0.87
SPT8YLR055C MSL5Q12186 476 aaKnown RBP RIP-Chip data9.63□□□□□ -0.87not detected
SPT8YLR055C HSP150P32478 413 aa9.63□□□□□ -0.87
SPT8YLR055C RPL14AP36105 138 aaKnown RBP9.63□□□□□ -0.87
SPT8YLR055C EDS1P38073 919 aa9.63□□□□□ -0.87
SPT8YLR055C RPL14BP38754 138 aaKnown RBP9.63□□□□□ -0.87
SPT8YLR055C WSS1P38838 269 aa9.63□□□□□ -0.87
SPT8YLR055C SMM1P53720 384 aaKnown RBP9.63□□□□□ -0.87
SPT8YLR055C IZH2Q12442 317 aa9.63□□□□□ -0.87
SPT8YLR055C YIL002W-AQ3E7Z5 69 aa9.63□□□□□ -0.87
SPT8YLR055C COA2Q3E823 68 aa9.63□□□□□ -0.87
SPT8YLR055C SUR2P38992 349 aa9.62□□□□□ -0.87
SPT8YLR055C YJR012CP47087 207 aa9.62□□□□□ -0.87
SPT8YLR055C HSV2P50079 448 aaPredicted RBP9.62□□□□□ -0.87
SPT8YLR055C CYT2Q00873 224 aa9.62□□□□□ -0.87
SPT8YLR055C MHR1Q06630 226 aa9.62□□□□□ -0.87
SPT8YLR055C AGC1Q12482 902 aa9.62□□□□□ -0.87
SPT8YLR055C MNS1P32906 549 aa9.61□□□□□ -0.87
SPT8YLR055C MGE1P38523 228 aa9.61□□□□□ -0.87
SPT8YLR055C GWT1P47026 490 aa9.61□□□□□ -0.87
SPT8YLR055C SLX9P53251 210 aaPredicted RBP9.61□□□□□ -0.87
SPT8YLR055C PBP1P53297 722 aaKnown RBP9.61□□□□□ -0.87
SPT8YLR055C SUR7P54003 302 aa9.61□□□□□ -0.87
SPT8YLR055C CGI121Q03705 181 aaKnown RBP9.61□□□□□ -0.87
SPT8YLR055C YRA1Q12159 226 aaKnown RBP9.61□□□□□ -0.87
SPT8YLR055C PCL1P24867 279 aa9.61□□□□□ -0.87
SPT8YLR055C ELO2P25358 347 aa9.61□□□□□ -0.87
SPT8YLR055C PTC7P38797 343 aa9.61□□□□□ -0.87
SPT8YLR055C YDR209CQ03480 137 aa9.61□□□□□ -0.87
SPT8YLR055C YDR387CQ04162 555 aa9.61□□□□□ -0.87
SPT8YLR055C YDL242WQ07746 117 aa9.61□□□□□ -0.87
SPT8YLR055C YOR032W-AQ8TGS1 66 aa9.61□□□□□ -0.87
SPT8YLR055C CKA1P15790 372 aa9.6□□□□□ -0.87
SPT8YLR055C ERG2P32352 222 aa9.6□□□□□ -0.87
SPT8YLR055C GLC7P32598 312 aaKnown RBP9.6□□□□□ -0.87
SPT8YLR055C ALK2P32789 676 aaPredicted RBP9.6□□□□□ -0.87
SPT8YLR055C REC114P32841 428 aa9.6□□□□□ -0.87
SPT8YLR055C YDR102CQ03864 110 aa9.6□□□□□ -0.87
SPT8YLR055C TGS1Q12052 315 aa9.6□□□□□ -0.87
SPT8YLR055C FCY22Q12119 530 aa9.6□□□□□ -0.87
SPT8YLR055C ISA2Q12425 185 aa9.6□□□□□ -0.87
SPT8YLR055C PAU19P0CE85 124 aa9.59□□□□□ -0.87
SPT8YLR055C PAU21P0CE86 164 aa9.59□□□□□ -0.87
SPT8YLR055C PAU22P0CE87 164 aa9.59□□□□□ -0.87
SPT8YLR055C PAU3P25610 124 aa9.59□□□□□ -0.87
SPT8YLR055C NUD1P32336 851 aa9.59□□□□□ -0.87
SPT8YLR055C MIA40P36046 403 aa9.59□□□□□ -0.87
SPT8YLR055C SWD2P36104 329 aaPredicted RBP9.59□□□□□ -0.87
SPT8YLR055C SEC24P40482 926 aaKnown RBP9.59□□□□□ -0.87
SPT8YLR055C MOB2P43563 287 aa9.59□□□□□ -0.87
SPT8YLR055C MSO1P53604 210 aaKnown RBP9.59□□□□□ -0.87
SPT8YLR055C YMR090WQ04304 227 aaKnown RBP9.59□□□□□ -0.87
SPT8YLR055C YOR352WQ08816 343 aa9.59□□□□□ -0.87
SPT8YLR055C SME1Q12330 94 aaPredicted RBP9.59□□□□□ -0.87
SPT8YLR055C TMA17Q12513 150 aa9.59□□□□□ -0.87
SPT8YLR055C MES1P00958 751 aaKnown RBP9.59□□□□□ -0.88
SPT8YLR055C FUN14P18411 198 aa9.59□□□□□ -0.88
SPT8YLR055C LSB5P25369 354 aa9.59□□□□□ -0.88
SPT8YLR055C PEX7P39108 375 aa9.59□□□□□ -0.88
SPT8YLR055C ATF1P40353 525 aa9.59□□□□□ -0.88
SPT8YLR055C SMD3P43321 101 aaKnown RBP9.59□□□□□ -0.88
SPT8YLR055C ERG25P53045 309 aa9.59□□□□□ -0.88
SPT8YLR055C YGR126WP53274 230 aa9.59□□□□□ -0.88
SPT8YLR055C PAU4P53427 120 aa9.59□□□□□ -0.88
SPT8YLR055C YIL134C-AQ45U18 67 aa9.59□□□□□ -0.88
SPT8YLR055C PRE9P23638 258 aaKnown RBP9.58□□□□□ -0.88
Retrieved 100 of 5,963 RNA–protein pairs in 93.9 ms