RNA–Protein interactions for RNA: YLR025W

SNF7, Transcript of One of four subunits of the ESCRT-III complex, yeastyeast

Gene SNF7, Length 723 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF7YLR025W MSY1P48527 492 aa6.42□□□□□ -1.38
SNF7YLR025W NSA1P53136 463 aaPredicted RBP6.42□□□□□ -1.38
SNF7YLR025W MRPS17Q03246 237 aaPredicted RBP6.42□□□□□ -1.38
SNF7YLR025W HRI1Q05905 244 aaKnown RBP6.42□□□□□ -1.38
SNF7YLR025W YOL029CQ08187 201 aa6.42□□□□□ -1.38
SNF7YLR025W YOR186WQ08560 144 aa6.42□□□□□ -1.38
SNF7YLR025W CDC28P00546 298 aaKnown RBP6.41□□□□□ -1.38
SNF7YLR025W MIR1P23641 311 aaKnown RBP6.41□□□□□ -1.38
SNF7YLR025W REC114P32841 428 aa6.41□□□□□ -1.38
SNF7YLR025W YKL162CP36052 402 aa6.41□□□□□ -1.38
SNF7YLR025W PRS3P38689 320 aaKnown RBP6.41□□□□□ -1.38
SNF7YLR025W IKI1P38874 309 aa6.41□□□□□ -1.38
SNF7YLR025W RPA34P47006 233 aaPredicted RBP6.41□□□□□ -1.38
SNF7YLR025W MRX5P47007 382 aa6.41□□□□□ -1.38
SNF7YLR025W APJ1P53940 528 aa6.41□□□□□ -1.38
SNF7YLR025W TSA2Q04120 196 aa6.41□□□□□ -1.38
SNF7YLR025W RFU1Q08003 200 aa6.41□□□□□ -1.38
SNF7YLR025W PRS5Q12265 496 aaKnown RBP6.41□□□□□ -1.38
SNF7YLR025W SNU23Q12368 194 aaPredicted RBP6.41□□□□□ -1.38
SNF7YLR025W AGC1Q12482 902 aa6.41□□□□□ -1.38
SNF7YLR025W YIL046W-AQ3E7Z4 54 aa6.41□□□□□ -1.38
SNF7YLR025W TDH1P00360 332 aaKnown RBP6.4□□□□□ -1.38
SNF7YLR025W IPP1P00817 287 aaKnown RBP6.4□□□□□ -1.38
SNF7YLR025W ARO3P14843 370 aaKnown RBP6.4□□□□□ -1.38
SNF7YLR025W FAT1P38225 669 aa6.4□□□□□ -1.38
SNF7YLR025W YBR292CP38357 123 aa6.4□□□□□ -1.38
SNF7YLR025W GPI16P38875 610 aa6.4□□□□□ -1.38
SNF7YLR025W SOL1P50278 321 aa6.4□□□□□ -1.38
SNF7YLR025W YMR090WQ04304 227 aaKnown RBP6.4□□□□□ -1.38
SNF7YLR025W FIT1Q04433 528 aa6.4□□□□□ -1.38
SNF7YLR025W YDR286CQ05530 114 aa6.4□□□□□ -1.38
SNF7YLR025W TMA10Q06177 86 aa6.4□□□□□ -1.38
SNF7YLR025W SDO1Q07953 250 aaKnown RBP6.4□□□□□ -1.38
SNF7YLR025W GRE1Q08969 168 aa6.4□□□□□ -1.38
SNF7YLR025W HUT1Q12520 339 aa6.4□□□□□ -1.38
SNF7YLR025W ATG40Q99325 256 aa6.4□□□□□ -1.38
SNF7YLR025W RPL35AP0CX84 120 aaKnown RBP6.39□□□□□ -1.39
SNF7YLR025W RPL35BP0CX85 120 aaKnown RBP6.39□□□□□ -1.39
SNF7YLR025W DEG1P31115 442 aaKnown RBP6.39□□□□□ -1.39
SNF7YLR025W MCH2P36032 473 aa6.39□□□□□ -1.39
SNF7YLR025W PAC2P39937 518 aa6.39□□□□□ -1.39
SNF7YLR025W YEA4P40004 342 aa6.39□□□□□ -1.39
SNF7YLR025W YNR066CP53752 436 aa6.39□□□□□ -1.39
SNF7YLR025W NRG1Q03125 231 aa6.39□□□□□ -1.39
SNF7YLR025W TMA23Q03525 211 aa6.39□□□□□ -1.39
SNF7YLR025W TRS23Q03784 219 aa6.39□□□□□ -1.39
SNF7YLR025W YDL180WQ12301 547 aa6.39□□□□□ -1.39
SNF7YLR025W Q0144Q9ZZW2 109 aa6.39□□□□□ -1.39
SNF7YLR025W OCH1P31755 480 aa6.38□□□□□ -1.39
SNF7YLR025W ARC40P38328 384 aaKnown RBP6.38□□□□□ -1.39
SNF7YLR025W SPC25P40014 221 aa6.38□□□□□ -1.39
SNF7YLR025W YIL029CP40538 142 aa6.38□□□□□ -1.39
SNF7YLR025W YIL024CP40543 189 aa6.38□□□□□ -1.39
SNF7YLR025W HXT14P42833 540 aa6.38□□□□□ -1.39
SNF7YLR025W CGR1P53188 120 aa6.38□□□□□ -1.39
SNF7YLR025W HHT1P61830 136 aa6.38□□□□□ -1.39
SNF7YLR025W EST3Q03096 181 aa6.38□□□□□ -1.39
SNF7YLR025W ADD37Q03233 198 aa6.38□□□□□ -1.39
SNF7YLR025W YMR254CQ04838 102 aa6.38□□□□□ -1.39
SNF7YLR025W PRP11Q07350 266 aaPredicted RBP6.38□□□□□ -1.39
SNF7YLR025W YFH1Q07540 174 aa6.38□□□□□ -1.39
SNF7YLR025W YPD1Q07688 167 aa6.38□□□□□ -1.39
SNF7YLR025W PAM18Q07914 168 aa6.38□□□□□ -1.39
SNF7YLR025W IZH2Q12442 317 aa6.38□□□□□ -1.39
SNF7YLR025W YLR365WQ7LIF2 110 aa6.38□□□□□ -1.39
SNF7YLR025W CDC39P25655 2108 aaKnown RBP6.38□□□□□ -1.39
SNF7YLR025W CBP6P07253 162 aaPredicted RBP6.37□□□□□ -1.39
SNF7YLR025W PCL2P25693 308 aa6.37□□□□□ -1.39
SNF7YLR025W MNS1P32906 549 aa6.37□□□□□ -1.39
SNF7YLR025W SWD2P36104 329 aaPredicted RBP6.37□□□□□ -1.39
SNF7YLR025W PRS2P38620 318 aaKnown RBP6.37□□□□□ -1.39
SNF7YLR025W YER079WP40052 210 aaKnown RBP6.37□□□□□ -1.39
SNF7YLR025W GTT1P40582 234 aa6.37□□□□□ -1.39
SNF7YLR025W PHB1P40961 287 aa6.37□□□□□ -1.39
SNF7YLR025W GWT1P47026 490 aa6.37□□□□□ -1.39
SNF7YLR025W IKS1P47042 667 aa6.37□□□□□ -1.39
SNF7YLR025W YJR012CP47087 207 aa6.37□□□□□ -1.39
SNF7YLR025W HHO1P53551 258 aa6.37□□□□□ -1.39
SNF7YLR025W YIF1P53845 314 aaKnown RBP6.37□□□□□ -1.39
SNF7YLR025W MRPL19P53875 158 aa6.37□□□□□ -1.39
SNF7YLR025W SKO1Q02100 647 aa6.37□□□□□ -1.39
SNF7YLR025W SNO1Q03144 224 aa6.37□□□□□ -1.39
SNF7YLR025W GMC1Q04399 608 aa6.37□□□□□ -1.39
SNF7YLR025W COQ11Q05892 277 aa6.37□□□□□ -1.39
SNF7YLR025W FCY22Q12119 530 aa6.37□□□□□ -1.39
SNF7YLR025W AIM45Q12480 344 aaKnown RBP6.37□□□□□ -1.39
SNF7YLR025W RPL7AP05737 244 aaKnown RBP6.36□□□□□ -1.39
SNF7YLR025W PEX4P29340 183 aa6.36□□□□□ -1.39
SNF7YLR025W YUH1P35127 236 aa6.36□□□□□ -1.39
SNF7YLR025W MRPL4P36517 319 aa6.36□□□□□ -1.39
SNF7YLR025W MRPL39P36533 70 aa6.36□□□□□ -1.39
SNF7YLR025W POP2P39008 433 aa6.36□□□□□ -1.39
SNF7YLR025W XBP1P40489 647 aa6.36□□□□□ -1.39
SNF7YLR025W ERG25P53045 309 aa6.36□□□□□ -1.39
SNF7YLR025W YGR026WP53217 278 aa6.36□□□□□ -1.39
SNF7YLR025W PEF1P53238 335 aa6.36□□□□□ -1.39
SNF7YLR025W PCP1P53259 346 aa6.36□□□□□ -1.39
SNF7YLR025W MSO1P53604 210 aaKnown RBP6.36□□□□□ -1.39
SNF7YLR025W DPB4Q04603 196 aaKnown RBP6.36□□□□□ -1.39
SNF7YLR025W CRR1Q05790 422 aa6.36□□□□□ -1.39
Retrieved 100 of 5,963 RNA–protein pairs in 73.1 ms