RNA–Protein interactions for RNA: YIR009W

MSL1, Transcript of U2B component of U2 snRNP, yeastyeast

Gene MSL1, Length 336 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSL1YIR009W TVP15Q03860 143 aa1.56□□□□□ -2.16
MSL1YIR009W MRX4Q12467 430 aa1.56□□□□□ -2.16
MSL1YIR009W YPL229WQ99395 206 aa1.56□□□□□ -2.16
MSL1YIR009W TY1B-DR3Q99231 1755 aa1.56□□□□□ -2.16
MSL1YIR009W SEN1Q00416 2231 aaKnown RBP1.55□□□□□ -2.16
MSL1YIR009W SPT3P06844 337 aa1.55□□□□□ -2.16
MSL1YIR009W ADE1P27616 306 aa1.55□□□□□ -2.16
MSL1YIR009W ATP7P30902 174 aa1.55□□□□□ -2.16
MSL1YIR009W RNP1P32385 249 aa1.55□□□□□ -2.16
MSL1YIR009W ERG24P32462 438 aaKnown RBP1.55□□□□□ -2.16
MSL1YIR009W YCR087C-AP37263 153 aa1.55□□□□□ -2.16
MSL1YIR009W TEM1P38987 245 aa1.55□□□□□ -2.16
MSL1YIR009W SUR2P38992 349 aa1.55□□□□□ -2.16
MSL1YIR009W PEX17P40155 199 aa1.55□□□□□ -2.16
MSL1YIR009W PFS2P42841 465 aaKnown RBP1.55□□□□□ -2.16
MSL1YIR009W EAF6P47128 113 aa1.55□□□□□ -2.16
MSL1YIR009W MDM34P53083 459 aa1.55□□□□□ -2.16
MSL1YIR009W YGL159WP53110 370 aa1.55□□□□□ -2.16
MSL1YIR009W MMS2P53152 137 aa1.55□□□□□ -2.16
MSL1YIR009W ERV29P53337 310 aa1.55□□□□□ -2.16
MSL1YIR009W PDR17P53844 350 aa1.55□□□□□ -2.16
MSL1YIR009W PIN3Q06449 215 aa1.55□□□□□ -2.16
MSL1YIR009W PRR2Q12310 699 aa1.55□□□□□ -2.16
MSL1YIR009W ISD11Q6Q560 94 aa1.55□□□□□ -2.16
MSL1YIR009W YHR214C-EQ8TGK0 99 aa1.55□□□□□ -2.16
MSL1YIR009W FMP27Q06179 2628 aa1.55□□□□□ -2.16
MSL1YIR009W SEC7P11075 2009 aaKnown RBP1.54□□□□□ -2.16
MSL1YIR009W YHR139C-AO13536 103 aa1.54□□□□□ -2.16
MSL1YIR009W RAD10P06838 210 aa1.54□□□□□ -2.16
MSL1YIR009W MET2P08465 486 aa1.54□□□□□ -2.16
MSL1YIR009W YOL163WP0CF20 169 aa1.54□□□□□ -2.16
MSL1YIR009W DSF1P0CX08 502 aa1.54□□□□□ -2.16
MSL1YIR009W YNR073CP0CX09 502 aa1.54□□□□□ -2.16
MSL1YIR009W KSS1P14681 368 aa1.54□□□□□ -2.16
MSL1YIR009W GCN3P14741 305 aa1.54□□□□□ -2.16
MSL1YIR009W ERD2P18414 219 aa1.54□□□□□ -2.16
MSL1YIR009W BMH1P29311 267 aaKnown RBP1.54□□□□□ -2.16
MSL1YIR009W FMT1P32785 401 aa1.54□□□□□ -2.16
MSL1YIR009W ECM4P36156 370 aa1.54□□□□□ -2.16
MSL1YIR009W ECM13P38195 257 aa1.54□□□□□ -2.16
MSL1YIR009W YGP1P38616 354 aaKnown RBP1.54□□□□□ -2.16
MSL1YIR009W YHL044WP38727 235 aa1.54□□□□□ -2.16
MSL1YIR009W TRR2P38816 342 aa1.54□□□□□ -2.16
MSL1YIR009W YIL059CP40520 121 aa1.54□□□□□ -2.16
MSL1YIR009W IRC18P47056 224 aa1.54□□□□□ -2.16
MSL1YIR009W YJL016WP47072 561 aa1.54□□□□□ -2.16
MSL1YIR009W ILM1P47155 203 aa1.54□□□□□ -2.16
MSL1YIR009W OST3P48439 350 aa1.54□□□□□ -2.16
MSL1YIR009W SYF2P53277 215 aaPredicted RBP1.54□□□□□ -2.16
MSL1YIR009W HST4P53688 370 aa1.54□□□□□ -2.16
MSL1YIR009W DIA1P54005 336 aa1.54□□□□□ -2.16
MSL1YIR009W PRM15Q03262 622 aa1.54□□□□□ -2.16
MSL1YIR009W YML096WQ04489 525 aa1.54□□□□□ -2.16
MSL1YIR009W YLR030WQ07967 263 aa1.54□□□□□ -2.16
MSL1YIR009W GEP5Q12393 293 aa1.54□□□□□ -2.16
MSL1YIR009W YPL247CQ12523 523 aa1.54□□□□□ -2.16
MSL1YIR009W YPR170W-BP0C5R9 85 aa1.53□□□□□ -2.16
MSL1YIR009W FBA1P14540 359 aaKnown RBP1.53□□□□□ -2.16
MSL1YIR009W FCY2P17064 533 aa1.53□□□□□ -2.16
MSL1YIR009W TKL2P33315 681 aa1.53□□□□□ -2.16
MSL1YIR009W APS1P35181 156 aa1.53□□□□□ -2.16
MSL1YIR009W RCN1P36054 211 aa1.53□□□□□ -2.16
MSL1YIR009W YER189WP40104 122 aa1.53□□□□□ -2.16
MSL1YIR009W AIM25P47140 327 aa1.53□□□□□ -2.16
MSL1YIR009W YMD8Q03697 442 aa1.53□□□□□ -2.16
MSL1YIR009W INM2Q05533 292 aa1.53□□□□□ -2.16
MSL1YIR009W YOL160WQ08321 113 aa1.53□□□□□ -2.16
MSL1YIR009W YPL257WQ08974 193 aa1.53□□□□□ -2.16
MSL1YIR009W YPR063CQ12160 140 aa1.53□□□□□ -2.16
MSL1YIR009W HTL1Q9URQ5 78 aa1.53□□□□□ -2.16
MSL1YIR009W YLR462WO13556 202 aa1.52□□□□□ -2.17
MSL1YIR009W ZWF1P11412 505 aaKnown RBP1.52□□□□□ -2.17
MSL1YIR009W SNF6P18888 332 aa1.52□□□□□ -2.17
MSL1YIR009W TOM40P23644 387 aaKnown RBP1.52□□□□□ -2.17
MSL1YIR009W TRX3P25372 127 aa1.52□□□□□ -2.17
MSL1YIR009W PTM1P32857 523 aa1.52□□□□□ -2.17
MSL1YIR009W ARC19P33204 171 aaKnown RBP1.52□□□□□ -2.17
MSL1YIR009W CAF4P36130 643 aa1.52□□□□□ -2.17
MSL1YIR009W MRPL28P36527 147 aa1.52□□□□□ -2.17
MSL1YIR009W YAR068WP39564 161 aa1.52□□□□□ -2.17
MSL1YIR009W YEL075CP39972 122 aa1.52□□□□□ -2.17
MSL1YIR009W RMD6P39975 231 aa1.52□□□□□ -2.17
MSL1YIR009W COG3P40094 801 aa1.52□□□□□ -2.17
MSL1YIR009W YIR035CP40579 254 aa1.52□□□□□ -2.17
MSL1YIR009W ERG10P41338 398 aaKnown RBP1.52□□□□□ -2.17
MSL1YIR009W YFR045WP43617 309 aa1.52□□□□□ -2.17
MSL1YIR009W GON7P46984 123 aa1.52□□□□□ -2.17
MSL1YIR009W YJR056CP47115 236 aa1.52□□□□□ -2.17
MSL1YIR009W PET191Q02772 108 aa1.52□□□□□ -2.17
MSL1YIR009W GAS3Q03655 524 aa1.52□□□□□ -2.17
MSL1YIR009W GIM5Q04493 163 aa1.52□□□□□ -2.17
MSL1YIR009W SMD2Q06217 110 aaKnown RBP1.52□□□□□ -2.17
MSL1YIR009W NIP7Q08962 181 aaKnown RBP1.52□□□□□ -2.17
MSL1YIR009W MDM32Q12171 622 aa1.52□□□□□ -2.17
MSL1YIR009W SMT3Q12306 101 aaKnown RBP1.52□□□□□ -2.17
MSL1YIR009W CMC2Q3E7A4 109 aa1.52□□□□□ -2.17
MSL1YIR009W IGO2Q9P305 131 aa1.52□□□□□ -2.17
MSL1YIR009W YHR032W-AP0C5N6 59 aa1.51□□□□□ -2.17
MSL1YIR009W RPS23AP0CX29 145 aaKnown RBP1.51□□□□□ -2.17
MSL1YIR009W RPS23BP0CX30 145 aa1.51□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 49.7 ms