RNA–Protein interactions for RNA: YGR009C

SEC9, Transcript of t-SNARE protein required for secretory vesicle-plasma membrane fusion, yeastyeast

Gene SEC9, Length 1,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC9YGR009C YLR042CQ07990 161 aa4.32□□□□□ -1.72
SEC9YGR009C AIM39Q08223 395 aa4.32□□□□□ -1.72
SEC9YGR009C DNA2P38859 1522 aa4.31□□□□□ -1.72
SEC9YGR009C FMP49A0A023PZB3 126 aa4.31□□□□□ -1.72
SEC9YGR009C YEL009C-AA0A023PZF2 135 aa4.31□□□□□ -1.72
SEC9YGR009C AAC1P04710 309 aa4.31□□□□□ -1.72
SEC9YGR009C RPL20AP0CX23 172 aaKnown RBP4.31□□□□□ -1.72
SEC9YGR009C RPL20BP0CX24 172 aaPredicted RBP4.31□□□□□ -1.72
SEC9YGR009C RPL2AP0CX45 254 aaKnown RBP4.31□□□□□ -1.72
SEC9YGR009C RPL2BP0CX46 254 aaKnown RBP4.31□□□□□ -1.72
SEC9YGR009C YCR007CP25354 239 aa4.31□□□□□ -1.72
SEC9YGR009C LRE1P25579 583 aaKnown RBP4.31□□□□□ -1.72
SEC9YGR009C YHL049CP38722 271 aa4.31□□□□□ -1.72
SEC9YGR009C SMX2P40204 77 aaKnown RBP4.31□□□□□ -1.72
SEC9YGR009C PRE5P40302 234 aaKnown RBP4.31□□□□□ -1.72
SEC9YGR009C PAN6P40459 309 aa4.31□□□□□ -1.72
SEC9YGR009C APQ12P40532 138 aa4.31□□□□□ -1.72
SEC9YGR009C YIL012WP40551 113 aa4.31□□□□□ -1.72
SEC9YGR009C EGT2P42835 1041 aa4.31□□□□□ -1.72
SEC9YGR009C MNN5P46982 586 aa4.31□□□□□ -1.72
SEC9YGR009C SBH1P52870 82 aa4.31□□□□□ -1.72
SEC9YGR009C YGR039WP53225 103 aa4.31□□□□□ -1.72
SEC9YGR009C WSC2P53832 503 aa4.31□□□□□ -1.72
SEC9YGR009C YMR099CQ03161 297 aaKnown RBP4.31□□□□□ -1.72
SEC9YGR009C NAT3Q06504 195 aa4.31□□□□□ -1.72
SEC9YGR009C SWC7Q06707 132 aa4.31□□□□□ -1.72
SEC9YGR009C PBP4Q07362 185 aaKnown RBP4.31□□□□□ -1.72
SEC9YGR009C MMT2Q08970 484 aa4.31□□□□□ -1.72
SEC9YGR009C ULS1Q08562 1619 aa4.31□□□□□ -1.72
SEC9YGR009C TY1B-BRQ12193 1756 aa4.31□□□□□ -1.72
SEC9YGR009C PDC2P32896 925 aa4.31□□□□□ -1.72
SEC9YGR009C LAG1P38703 411 aa4.31□□□□□ -1.72
SEC9YGR009C IPT1P38954 527 aa4.31□□□□□ -1.72
SEC9YGR009C YIL165CP40446 119 aa4.31□□□□□ -1.72
SEC9YGR009C DIM1P41819 318 aaKnown RBP4.31□□□□□ -1.72
SEC9YGR009C SNO3P43544 222 aa4.31□□□□□ -1.72
SEC9YGR009C BUD13P46947 266 aaPredicted RBP4.31□□□□□ -1.72
SEC9YGR009C GON7P46984 123 aa4.31□□□□□ -1.72
SEC9YGR009C SNO2P53823 222 aa4.31□□□□□ -1.72
SEC9YGR009C TEX1P53851 422 aaKnown RBP4.31□□□□□ -1.72
SEC9YGR009C THI74Q04083 370 aa4.31□□□□□ -1.72
SEC9YGR009C HRI1Q05905 244 aaKnown RBP4.31□□□□□ -1.72
SEC9YGR009C BSP1Q06604 576 aa4.31□□□□□ -1.72
SEC9YGR009C YPQ1Q12010 308 aa4.31□□□□□ -1.72
SEC9YGR009C ATG5Q12380 294 aa4.31□□□□□ -1.72
SEC9YGR009C KTI11Q3E840 82 aa4.31□□□□□ -1.72
SEC9YGR009C IGO2Q9P305 131 aa4.31□□□□□ -1.72
SEC9YGR009C SUC2P00724 532 aa4.3□□□□□ -1.72
SEC9YGR009C BI2P03873 423 aa4.3□□□□□ -1.72
SEC9YGR009C CAP2P13517 287 aa4.3□□□□□ -1.72
SEC9YGR009C UBC5P15732 148 aa4.3□□□□□ -1.72
SEC9YGR009C PUP3P25451 205 aaKnown RBP4.3□□□□□ -1.72
SEC9YGR009C QRI5P32344 111 aa4.3□□□□□ -1.72
SEC9YGR009C MSN2P33748 704 aa4.3□□□□□ -1.72
SEC9YGR009C PMU1P36069 295 aa4.3□□□□□ -1.72
SEC9YGR009C NDT80P38830 627 aa4.3□□□□□ -1.72
SEC9YGR009C HMF1P40037 129 aaKnown RBP4.3□□□□□ -1.72
SEC9YGR009C YER188WP40103 239 aa4.3□□□□□ -1.72
SEC9YGR009C YIL059CP40520 121 aa4.3□□□□□ -1.72
SEC9YGR009C SAS2P40963 338 aa4.3□□□□□ -1.72
SEC9YGR009C GCV1P48015 400 aa4.3□□□□□ -1.72
SEC9YGR009C ERG25P53045 309 aa4.3□□□□□ -1.72
SEC9YGR009C SDT1P53078 280 aa4.3□□□□□ -1.72
SEC9YGR009C YGR015CP53208 328 aa4.3□□□□□ -1.72
SEC9YGR009C CPD1P53314 239 aa4.3□□□□□ -1.72
SEC9YGR009C FMP41P53889 259 aaKnown RBP4.3□□□□□ -1.72
SEC9YGR009C SLG1P54867 378 aa4.3□□□□□ -1.72
SEC9YGR009C ERV2Q12284 196 aa4.3□□□□□ -1.72
SEC9YGR009C RNH203Q12338 110 aa4.3□□□□□ -1.72
SEC9YGR009C PCC1Q3E833 88 aa4.3□□□□□ -1.72
SEC9YGR009C PDR12Q02785 1511 aa4.3□□□□□ -1.72
SEC9YGR009C TY1B-JR2P47100 1755 aaKnown RBP4.29□□□□□ -1.72
SEC9YGR009C TY1B-ER2Q03619 1755 aa4.29□□□□□ -1.72
SEC9YGR009C TY1B-MR1Q04214 1755 aa4.29□□□□□ -1.72
SEC9YGR009C TY1B-MR2Q04670 1755 aaKnown RBP4.29□□□□□ -1.72
SEC9YGR009C TY1B-LR1Q12088 1755 aaKnown RBP4.29□□□□□ -1.72
SEC9YGR009C TY1B-NL1Q12112 1755 aa4.29□□□□□ -1.72
SEC9YGR009C TY1B-GR1Q12141 1755 aa4.29□□□□□ -1.72
SEC9YGR009C TY1B-BLQ12490 1755 aa4.29□□□□□ -1.72
SEC9YGR009C RFA2P26754 273 aaKnown RBP4.29□□□□□ -1.72
SEC9YGR009C ECM15P35195 104 aa4.29□□□□□ -1.72
SEC9YGR009C INM1P38710 295 aa4.29□□□□□ -1.72
SEC9YGR009C NSG1P38837 291 aa4.29□□□□□ -1.72
SEC9YGR009C YGR219WP53307 113 aa4.29□□□□□ -1.72
SEC9YGR009C YIF1P53845 314 aaKnown RBP4.29□□□□□ -1.72
SEC9YGR009C TEN1Q07921 160 aa4.29□□□□□ -1.72
SEC9YGR009C THI20Q08224 551 aa4.29□□□□□ -1.72
SEC9YGR009C ACM1Q08981 209 aa4.29□□□□□ -1.72
SEC9YGR009C FCY1Q12178 158 aa4.29□□□□□ -1.72
SEC9YGR009C MCT1Q12283 360 aa4.29□□□□□ -1.72
SEC9YGR009C YIL177CP40434 1758 aa4.29□□□□□ -1.72
SEC9YGR009C YJL225CP40889 1758 aa4.29□□□□□ -1.72
SEC9YGR009C COX4P04037 155 aa4.29□□□□□ -1.72
SEC9YGR009C TIP1P27654 210 aaPredicted RBP4.29□□□□□ -1.72
SEC9YGR009C SNC1P31109 117 aa4.29□□□□□ -1.72
SEC9YGR009C ACB1P31787 87 aa4.29□□□□□ -1.72
SEC9YGR009C PRO1P32264 428 aa4.29□□□□□ -1.72
SEC9YGR009C NUD1P32336 851 aa4.29□□□□□ -1.72
SEC9YGR009C CHS7P38843 316 aa4.29□□□□□ -1.72
SEC9YGR009C MDM31P38880 579 aa4.29□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 29.8 ms