RNA–Protein interactions for RNA: YGL239C

YGL239C, Transcript of Dubious open reading frame, yeast

Gene YGL239C, Length 315 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YGL239C	YGL239C	TDA8	Q6B2U8	126 aa		0.71	□□□□□ -2.3
YGL239C	YGL239C	CDC28	P00546	298 aa	Known RBP	0.7	□□□□□ -2.3
YGL239C	YGL239C	SPT3	P06844	337 aa		0.7	□□□□□ -2.3
YGL239C	YGL239C	SRY1	P36007	326 aa		0.7	□□□□□ -2.3
YGL239C	YGL239C	MRPL17	P36528	281 aa		0.7	□□□□□ -2.3
YGL239C	YGL239C	UMP1	P38293	148 aa		0.7	□□□□□ -2.3
YGL239C	YGL239C	ERJ5	P43613	295 aa	Predicted RBP	0.7	□□□□□ -2.3
YGL239C	YGL239C	LIA1	P47120	325 aa	Known RBP	0.7	□□□□□ -2.3
YGL239C	YGL239C	MPA43	P53583	542 aa	Predicted RBP	0.7	□□□□□ -2.3
YGL239C	YGL239C	FYV6	P53913	173 aa		0.7	□□□□□ -2.3
YGL239C	YGL239C	SWP1	Q02795	286 aa		0.7	□□□□□ -2.3
YGL239C	YGL239C	RRN5	Q02983	363 aa		0.7	□□□□□ -2.3
YGL239C	YGL239C	TIM9	O74700	87 aa		0.69	□□□□□ -2.3
YGL239C	YGL239C	CPA1	P07258	411 aa	Known RBP	0.69	□□□□□ -2.3
YGL239C	YGL239C	SNC2	P33328	115 aa		0.69	□□□□□ -2.3
YGL239C	YGL239C	SKG1	P36169	355 aa		0.69	□□□□□ -2.3
YGL239C	YGL239C	COX15	P40086	486 aa		0.69	□□□□□ -2.3
YGL239C	YGL239C	PRE6	P40303	254 aa	Known RBP	0.69	□□□□□ -2.3
YGL239C	YGL239C	PRM8	P53174	237 aa		0.69	□□□□□ -2.3
YGL239C	YGL239C	ALG13	P53178	202 aa		0.69	□□□□□ -2.3
YGL239C	YGL239C	NOP13	P53883	403 aa	Known RBP RIP-Chip data	0.69	□□□□□ -2.3	not detected
YGL239C	YGL239C	UBC7	Q02159	165 aa		0.69	□□□□□ -2.3
YGL239C	YGL239C	CDC123	Q05791	360 aa		0.69	□□□□□ -2.3
YGL239C	YGL239C	TSC3	Q3E790	80 aa		0.69	□□□□□ -2.3
YGL239C	YGL239C	MSB2	P32334	1306 aa		0.68	□□□□□ -2.3
YGL239C	YGL239C	VAR1	P02381	398 aa		0.68	□□□□□ -2.3
YGL239C	YGL239C	DBF2	P22204	572 aa		0.68	□□□□□ -2.3
YGL239C	YGL239C	TFC1	P32367	649 aa		0.68	□□□□□ -2.3
YGL239C	YGL239C	TVP38	P36164	337 aa		0.68	□□□□□ -2.3
YGL239C	YGL239C	YER076C	P40049	302 aa		0.68	□□□□□ -2.3
YGL239C	YGL239C	GVP36	P40531	326 aa	Known RBP	0.68	□□□□□ -2.3
YGL239C	YGL239C	RPC17	P47076	161 aa		0.68	□□□□□ -2.3
YGL239C	YGL239C	BXI1	P48558	297 aa		0.68	□□□□□ -2.3
YGL239C	YGL239C	YLR283W	Q05867	314 aa		0.68	□□□□□ -2.3
YGL239C	YGL239C	RHO1	P06780	209 aa	Known RBP	0.67	□□□□□ -2.3
YGL239C	YGL239C	SSO1	P32867	290 aa		0.67	□□□□□ -2.3
YGL239C	YGL239C	YBR209W	P38311	105 aa		0.67	□□□□□ -2.3
YGL239C	YGL239C	MIC12	P38341	106 aa		0.67	□□□□□ -2.3
YGL239C	YGL239C	KNH1	P50112	268 aa		0.67	□□□□□ -2.3
YGL239C	YGL239C	BRR6	P53062	197 aa		0.67	□□□□□ -2.3
YGL239C	YGL239C	POP3	P53833	195 aa	Predicted RBP	0.67	□□□□□ -2.3
YGL239C	YGL239C	FSF1	Q12029	327 aa	Known RBP	0.67	□□□□□ -2.3
YGL239C	YGL239C	MCP1	Q12106	302 aa		0.67	□□□□□ -2.3
YGL239C	YGL239C	YDL180W	Q12301	547 aa		0.67	□□□□□ -2.3
YGL239C	YGL239C	THP2	O13539	261 aa	Known RBP	0.66	□□□□□ -2.3
YGL239C	YGL239C	RPL28	P02406	149 aa	Known RBP	0.66	□□□□□ -2.3
YGL239C	YGL239C	SIR2	P06700	562 aa		0.66	□□□□□ -2.3
YGL239C	YGL239C	YMR31	P19955	123 aa		0.66	□□□□□ -2.3
YGL239C	YGL239C	VMA6	P32366	345 aa	Known RBP	0.66	□□□□□ -2.3
YGL239C	YGL239C	APS1	P35181	156 aa		0.66	□□□□□ -2.3
YGL239C	YGL239C	UTP30	P36144	274 aa	Known RBP	0.66	□□□□□ -2.3
YGL239C	YGL239C	RIO2	P40160	425 aa	Known RBP	0.66	□□□□□ -2.3
YGL239C	YGL239C	FAR7	P43592	221 aa		0.66	□□□□□ -2.3
YGL239C	YGL239C	RPL37A	P49166	88 aa	Known RBP	0.66	□□□□□ -2.3
YGL239C	YGL239C	MIC26	P50087	233 aa		0.66	□□□□□ -2.3
YGL239C	YGL239C	GPM2	Q12008	311 aa		0.66	□□□□□ -2.3
YGL239C	YGL239C	YNL146C-A	Q3E7Z1	64 aa		0.66	□□□□□ -2.3
YGL239C	YGL239C	YLR236C	A0A023PZG4	107 aa		0.65	□□□□□ -2.31
YGL239C	YGL239C	SEC17	P32602	292 aa		0.65	□□□□□ -2.31
YGL239C	YGL239C	AST2	P39945	430 aa	Known RBP	0.65	□□□□□ -2.31
YGL239C	YGL239C	RMD6	P39975	231 aa		0.65	□□□□□ -2.31
YGL239C	YGL239C	YER085C	P40058	173 aa		0.65	□□□□□ -2.31
YGL239C	YGL239C	CUS2	P53830	285 aa	Predicted RBP	0.65	□□□□□ -2.31
YGL239C	YGL239C	YDR274C	P87283	123 aa		0.65	□□□□□ -2.31
YGL239C	YGL239C	YHR214C-E	Q8TGK0	99 aa		0.65	□□□□□ -2.31
YGL239C	YGL239C	ATG40	Q99325	256 aa		0.65	□□□□□ -2.31
YGL239C	YGL239C	YIL177C	P40434	1758 aa		0.65	□□□□□ -2.31
YGL239C	YGL239C	YJL225C	P40889	1758 aa		0.65	□□□□□ -2.31
YGL239C	YGL239C	RPL24B	P24000	155 aa	Known RBP	0.64	□□□□□ -2.31
YGL239C	YGL239C	PPA2	P28239	310 aa		0.64	□□□□□ -2.31
YGL239C	YGL239C	TCA17	P32613	152 aa		0.64	□□□□□ -2.31
YGL239C	YGL239C	YBR285W	P38354	144 aa		0.64	□□□□□ -2.31
YGL239C	YGL239C	YFR032C-B	Q8TGU2	87 aa		0.64	□□□□□ -2.31
YGL239C	YGL239C	URA5	P13298	226 aa	Known RBP	0.63	□□□□□ -2.31
YGL239C	YGL239C	KSS1	P14681	368 aa		0.63	□□□□□ -2.31
YGL239C	YGL239C	BET1	P22804	142 aa		0.63	□□□□□ -2.31
YGL239C	YGL239C	IDH1	P28834	360 aa	Known RBP RIP-Chip data	0.63	□□□□□ -2.31	not detected
YGL239C	YGL239C	PTM1	P32857	523 aa		0.63	□□□□□ -2.31
YGL239C	YGL239C	RAD28	Q12021	506 aa		0.63	□□□□□ -2.31
YGL239C	YGL239C	AQY2	P0CD90	149 aa		0.62	□□□□□ -2.31
YGL239C	YGL239C	GCN3	P14741	305 aa		0.62	□□□□□ -2.31
YGL239C	YGL239C	NSP1	P14907	823 aa	Known RBP	0.62	□□□□□ -2.31
YGL239C	YGL239C	SEC11	P15367	167 aa		0.62	□□□□□ -2.31
YGL239C	YGL239C	SHE2	P36068	246 aa	Known RBP RIP-Chip data	0.62	□□□□□ -2.31	not detected
YGL239C	YGL239C	OPY1	P38271	328 aa		0.62	□□□□□ -2.31
YGL239C	YGL239C	RTC3	P38804	111 aa	Predicted RBP	0.62	□□□□□ -2.31
YGL239C	YGL239C	YEL067C	P39978	195 aa		0.62	□□□□□ -2.31
YGL239C	YGL239C	ADO1	P47143	340 aa	Known RBP	0.62	□□□□□ -2.31
YGL239C	YGL239C	YGR050C	P53231	118 aa		0.62	□□□□□ -2.31
YGL239C	YGL239C	YDR249C	Q03787	373 aa		0.62	□□□□□ -2.31
YGL239C	YGL239C	CUE4	Q04201	117 aa	Predicted RBP	0.62	□□□□□ -2.31
YGL239C	YGL239C	ACC1	Q00955	2233 aa	Known RBP	0.61	□□□□□ -2.31
YGL239C	YGL239C	YBR121C-A	P0C5L4	52 aa		0.61	□□□□□ -2.31
YGL239C	YGL239C	ATP15	P21306	62 aa		0.61	□□□□□ -2.31
YGL239C	YGL239C	PBN1	P25580	416 aa		0.61	□□□□□ -2.31
YGL239C	YGL239C	SIP3	P38717	1229 aa		0.61	□□□□□ -2.31
YGL239C	YGL239C	VMA22	P38784	181 aa		0.61	□□□□□ -2.31
YGL239C	YGL239C	ERG28	P40030	148 aa		0.61	□□□□□ -2.31
YGL239C	YGL239C	RTR1	P40084	226 aa	Predicted RBP	0.61	□□□□□ -2.31
YGL239C	YGL239C	HUA1	P40325	198 aa		0.61	□□□□□ -2.31

Retrieved 100 of 5,963 RNA–protein pairs in 97.1 ms