RNA–Protein interactions for RNA: LSR1

LSR1, Transcript of U2 spliceosomal RNA (U2 snRNA), component of the spliceosome, yeastyeast

Gene LSR1, Length 1,175 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSR1LSR1 PRS2P38620 318 aaKnown RBP7.55□□□□□ -1.2
LSR1LSR1 POP2P39008 433 aa7.55□□□□□ -1.2
LSR1LSR1 TOK1P40310 691 aa7.55□□□□□ -1.2
LSR1LSR1 IRC24P40580 263 aa7.55□□□□□ -1.2
LSR1LSR1 DUG1P43616 481 aaKnown RBP7.55□□□□□ -1.2
LSR1LSR1 ACS1Q01574 713 aa7.55□□□□□ -1.2
LSR1LSR1 ATG21Q02887 496 aa7.55□□□□□ -1.2
LSR1LSR1 ADD37Q03233 198 aa7.55□□□□□ -1.2
LSR1LSR1 YMR082CQ04276 118 aa7.55□□□□□ -1.2
LSR1LSR1 YML053CQ04978 212 aa7.55□□□□□ -1.2
LSR1LSR1 YLR456WQ06199 204 aa7.55□□□□□ -1.2
LSR1LSR1 ERF2Q06551 359 aa7.55□□□□□ -1.2
LSR1LSR1 MED7Q08278 222 aa7.55□□□□□ -1.2
LSR1LSR1 YMR084WA2P2R3 262 aa7.54□□□□□ -1.2
LSR1LSR1 MAK32P23060 363 aa7.54□□□□□ -1.2
LSR1LSR1 POP5P28005 173 aa7.54□□□□□ -1.2
LSR1LSR1 OCH1P31755 480 aa7.54□□□□□ -1.2
LSR1LSR1 ERG2P32352 222 aa7.54□□□□□ -1.2
LSR1LSR1 GLC7P32598 312 aaKnown RBP7.54□□□□□ -1.2
LSR1LSR1 MNS1P32906 549 aa7.54□□□□□ -1.2
LSR1LSR1 ARC40P38328 384 aaKnown RBP7.54□□□□□ -1.2
LSR1LSR1 YER158CP40095 573 aa7.54□□□□□ -1.2
LSR1LSR1 IKS1P47042 667 aa7.54□□□□□ -1.2
LSR1LSR1 YGL262WP53054 175 aa7.54□□□□□ -1.2
LSR1LSR1 RSM23Q01163 450 aa7.54□□□□□ -1.2
LSR1LSR1 COA2Q3E823 68 aa7.54□□□□□ -1.2
LSR1LSR1 YLR365WQ7LIF2 110 aa7.54□□□□□ -1.2
LSR1LSR1 ACC1Q00955 2233 aaKnown RBP7.54□□□□□ -1.2
LSR1LSR1 YHR214C-DP0CX93 97 aa7.53□□□□□ -1.2
LSR1LSR1 POF1P25576 258 aa7.53□□□□□ -1.2
LSR1LSR1 REC114P32841 428 aa7.53□□□□□ -1.2
LSR1LSR1 SHO1P40073 367 aa7.53□□□□□ -1.2
LSR1LSR1 CUP9P41817 306 aa7.53□□□□□ -1.2
LSR1LSR1 ERG25P53045 309 aa7.53□□□□□ -1.2
LSR1LSR1 HOL1P53389 586 aa7.53□□□□□ -1.2
LSR1LSR1 YNR048WP53740 393 aa7.53□□□□□ -1.2
LSR1LSR1 YNL165WP53891 406 aa7.53□□□□□ -1.2
LSR1LSR1 YVH1Q02256 364 aaKnown RBP7.53□□□□□ -1.2
LSR1LSR1 CGI121Q03705 181 aaKnown RBP7.53□□□□□ -1.2
LSR1LSR1 HFA1P32874 2273 aa7.53□□□□□ -1.2
LSR1LSR1 YPR117WQ06116 2489 aa7.53□□□□□ -1.2
LSR1LSR1 FLO9P39712 1322 aa7.52□□□□□ -1.2
LSR1LSR1 RPL30P14120 105 aaKnown RBP7.52□□□□□ -1.21
LSR1LSR1 CDC26P14724 124 aa7.52□□□□□ -1.21
LSR1LSR1 CKA1P15790 372 aa7.52□□□□□ -1.21
LSR1LSR1 MRPL44P19956 98 aa7.52□□□□□ -1.21
LSR1LSR1 MDH2P22133 377 aa7.52□□□□□ -1.21
LSR1LSR1 SOF1P33750 489 aaKnown RBP7.52□□□□□ -1.21
LSR1LSR1 YNK1P36010 153 aaKnown RBP7.52□□□□□ -1.21
LSR1LSR1 SLM6P38343 150 aa7.52□□□□□ -1.21
LSR1LSR1 WSS1P38838 269 aa7.52□□□□□ -1.21
LSR1LSR1 FLX1P40464 311 aa7.52□□□□□ -1.21
LSR1LSR1 YIL077CP40508 320 aa7.52□□□□□ -1.21
LSR1LSR1 REE1P40893 198 aa7.52□□□□□ -1.21
LSR1LSR1 YJR012CP47087 207 aa7.52□□□□□ -1.21
LSR1LSR1 TEX1P53851 422 aaKnown RBP7.52□□□□□ -1.21
LSR1LSR1 YDC1Q02896 317 aa7.52□□□□□ -1.21
LSR1LSR1 DIG2Q03373 323 aaKnown RBP7.52□□□□□ -1.21
LSR1LSR1 CUE4Q04201 117 aaPredicted RBP7.52□□□□□ -1.21
LSR1LSR1 GMC1Q04399 608 aa7.52□□□□□ -1.21
LSR1LSR1 YOR376WQ08900 122 aa7.52□□□□□ -1.21
LSR1LSR1 RAD28Q12021 506 aa7.52□□□□□ -1.21
LSR1LSR1 YCR025CP25352 136 aa7.51□□□□□ -1.21
LSR1LSR1 NTF2P33331 125 aaKnown RBP7.51□□□□□ -1.21
LSR1LSR1 RPB7P34087 171 aa7.51□□□□□ -1.21
LSR1LSR1 PHS1P40857 217 aa7.51□□□□□ -1.21
LSR1LSR1 SMD3P43321 101 aaKnown RBP7.51□□□□□ -1.21
LSR1LSR1 RPA34P47006 233 aaPredicted RBP7.51□□□□□ -1.21
LSR1LSR1 AIM24P47127 394 aa7.51□□□□□ -1.21
LSR1LSR1 OCA2P53949 197 aa7.51□□□□□ -1.21
LSR1LSR1 TRS23Q03784 219 aa7.51□□□□□ -1.21
LSR1LSR1 AVO2Q04749 426 aa7.51□□□□□ -1.21
LSR1LSR1 YDR286CQ05530 114 aa7.51□□□□□ -1.21
LSR1LSR1 HRI1Q05905 244 aaKnown RBP7.51□□□□□ -1.21
LSR1LSR1 TDA6Q06466 467 aa7.51□□□□□ -1.21
LSR1LSR1 YOR015WQ12169 119 aa7.51□□□□□ -1.21
LSR1LSR1 YPR108W-AQ3E7B3 70 aa7.51□□□□□ -1.21
LSR1LSR1 TDH3P00359 332 aaKnown RBP RIP-Chip data7.5□□□□□ -1.21not detected
LSR1LSR1 GDH1P07262 454 aaKnown RBP7.5□□□□□ -1.21
LSR1LSR1 PAU19P0CE85 124 aa7.5□□□□□ -1.21
LSR1LSR1 PAU21P0CE86 164 aa7.5□□□□□ -1.21
LSR1LSR1 PAU22P0CE87 164 aa7.5□□□□□ -1.21
LSR1LSR1 PRE9P23638 258 aaKnown RBP7.5□□□□□ -1.21
LSR1LSR1 PAU3P25610 124 aa7.5□□□□□ -1.21
LSR1LSR1 ACP1P32463 125 aa7.5□□□□□ -1.21
LSR1LSR1 YBR013CP38215 129 aa7.5□□□□□ -1.21
LSR1LSR1 FLO5P38894 1075 aa7.5□□□□□ -1.21
LSR1LSR1 YGL185CP53100 379 aa7.5□□□□□ -1.21
LSR1LSR1 YGL114WP53134 725 aa7.5□□□□□ -1.21
LSR1LSR1 MSO1P53604 210 aaKnown RBP7.5□□□□□ -1.21
LSR1LSR1 CTR3Q06686 241 aa7.5□□□□□ -1.21
LSR1LSR1 YOL029CQ08187 201 aa7.5□□□□□ -1.21
LSR1LSR1 AGC1Q12482 902 aa7.5□□□□□ -1.21
LSR1LSR1 PDX1P16451 410 aa7.49□□□□□ -1.21
LSR1LSR1 CDC50P25656 391 aa7.49□□□□□ -1.21
LSR1LSR1 SCM4P32564 187 aa7.49□□□□□ -1.21
LSR1LSR1 HSP10P38910 106 aa7.49□□□□□ -1.21
LSR1LSR1 BNS1P50084 137 aa7.49□□□□□ -1.21
LSR1LSR1 SLX9P53251 210 aaPredicted RBP7.49□□□□□ -1.21
LSR1LSR1 NRM1P53718 249 aa7.49□□□□□ -1.21
Retrieved 100 of 5,963 RNA–protein pairs in 30.8 ms