RNA–Protein interactions for RNA: ENST00000639487.1

RTTN-215, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 3,175 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-215ENST00000639487 CLCN4P51793 760 aa7.04□□□□□ -1.28
RTTN-215ENST00000639487 NCAPHQ15003 741 aa7.04□□□□□ -1.28
RTTN-215ENST00000639487 SV2CQ496J9 727 aa7.04□□□□□ -1.28
RTTN-215ENST00000639487 ZC3H12AQ5D1E8 599 aaKnown RBP7.04□□□□□ -1.28
RTTN-215ENST00000639487 BSNDQ8WZ55 320 aa7.04□□□□□ -1.28
RTTN-215ENST00000639487 SLC2A11Q9BYW1 496 aa7.04□□□□□ -1.28
RTTN-215ENST00000639487 CDT1Q9H211 546 aa7.04□□□□□ -1.28
RTTN-215ENST00000639487 MLXIPQ9HAP2 919 aa7.04□□□□□ -1.28
RTTN-215ENST00000639487 SUCLA2Q9P2R7 463 aaPredicted RBP7.04□□□□□ -1.28
RTTN-215ENST00000639487 JAG2Q9Y219 1238 aa7.04□□□□□ -1.28
RTTN-215ENST00000639487 O00370 1275 aa7.04□□□□□ -1.28
RTTN-215ENST00000639487 PJA2O43164 708 aa7.04□□□□□ -1.28
RTTN-215ENST00000639487 TLL1O43897 1013 aa7.04□□□□□ -1.28
RTTN-215ENST00000639487 ACO1P21399 889 aaKnown RBP7.04□□□□□ -1.28
RTTN-215ENST00000639487 KLRC1P26715 233 aa7.04□□□□□ -1.28
RTTN-215ENST00000639487 CSNK1DP48730 415 aa7.04□□□□□ -1.28
RTTN-215ENST00000639487 FXR1P51114 621 aaKnown RBP eCLIP7.04□□□□□ -1.28
RTTN-215ENST00000639487 TAP1Q03518 808 aa7.04□□□□□ -1.28
RTTN-215ENST00000639487 NR5A1Q13285 461 aa7.04□□□□□ -1.28
RTTN-215ENST00000639487 DRP2Q13474 957 aa7.04□□□□□ -1.28
RTTN-215ENST00000639487 IQCB1Q15051 598 aa7.04□□□□□ -1.28
RTTN-215ENST00000639487 C1QTNF12Q5T7M4 302 aa7.04□□□□□ -1.28
RTTN-215ENST00000639487 AGMOQ6ZNB7 445 aa7.04□□□□□ -1.28
RTTN-215ENST00000639487 CYFIP1Q7L576 1253 aa7.04□□□□□ -1.28
RTTN-215ENST00000639487 C11orf74Q86VG3 221 aa7.04□□□□□ -1.28
RTTN-215ENST00000639487 GJD3Q8N144 294 aa7.04□□□□□ -1.28
RTTN-215ENST00000639487 ELSPBP1Q96BH3 223 aa7.04□□□□□ -1.28
RTTN-215ENST00000639487 KDM4CQ9H3R0 1056 aa7.04□□□□□ -1.28
RTTN-215ENST00000639487 AGPAT3Q9NRZ7 376 aa7.04□□□□□ -1.28
RTTN-215ENST00000639487 TOPORSQ9NS56 1045 aaPredicted RBP7.04□□□□□ -1.28
RTTN-215ENST00000639487 NAALADL1Q9UQQ1 740 aa7.04□□□□□ -1.28
RTTN-215ENST00000639487 HHLA1C9JL84 531 aa7.04□□□□□ -1.28
RTTN-215ENST00000639487 LRP3O75074 770 aa7.04□□□□□ -1.28
RTTN-215ENST00000639487 HIP1RO75146 1068 aa7.04□□□□□ -1.28
RTTN-215ENST00000639487 GOLGA8HP0CJ92 632 aa7.04□□□□□ -1.28
RTTN-215ENST00000639487 MTFR1Q15390 333 aa7.04□□□□□ -1.28
RTTN-215ENST00000639487 SMAD2Q15796 467 aaKnown RBP7.04□□□□□ -1.28
RTTN-215ENST00000639487 CLPPQ16740 277 aaPredicted RBP7.04□□□□□ -1.28
RTTN-215ENST00000639487 MTERF2Q49AM1 385 aa7.04□□□□□ -1.28
RTTN-215ENST00000639487 PRAMEF18Q5VWM3 479 aa7.04□□□□□ -1.28
RTTN-215ENST00000639487 NLRP8Q86W28 1048 aa7.04□□□□□ -1.28
RTTN-215ENST00000639487 TMC8Q8IU68 726 aa7.04□□□□□ -1.28
RTTN-215ENST00000639487 ARHGAP18Q8N392 663 aa7.04□□□□□ -1.28
RTTN-215ENST00000639487 SLC30A5Q8TAD4 765 aa7.04□□□□□ -1.28
RTTN-215ENST00000639487 CLDN23Q96B33 292 aa7.04□□□□□ -1.28
RTTN-215ENST00000639487 SLC2A13Q96QE2 648 aa7.04□□□□□ -1.28
RTTN-215ENST00000639487 HNRNPABQ99729 332 aaKnown RBP7.04□□□□□ -1.28
RTTN-215ENST00000639487 ZKSCAN3Q9BRR0 538 aa7.04□□□□□ -1.28
RTTN-215ENST00000639487 RUSC1Q9BVN2 902 aa7.04□□□□□ -1.28
RTTN-215ENST00000639487 POLR3FQ9H1D9 316 aaPredicted RBP7.04□□□□□ -1.28
RTTN-215ENST00000639487 SFXN1Q9H9B4 322 aa7.04□□□□□ -1.28
RTTN-215ENST00000639487 SIX2Q9NPC8 291 aa7.04□□□□□ -1.28
RTTN-215ENST00000639487 GDE1Q9NZC3 331 aa7.04□□□□□ -1.28
RTTN-215ENST00000639487 PPARGC1AQ9UBK2 798 aaKnown RBP7.04□□□□□ -1.28
RTTN-215ENST00000639487 STARD13Q9Y3M8 1113 aa7.04□□□□□ -1.28
RTTN-215ENST00000639487 BZW2Q9Y6E2 419 aaKnown RBP7.04□□□□□ -1.28
RTTN-215ENST00000639487 PCM1Q15154 2024 aa7.03□□□□□ -1.28
RTTN-215ENST00000639487 CCDC189A1A4V9 331 aa7.03□□□□□ -1.28
RTTN-215ENST00000639487 LINC01553A4QN01 128 aa7.03□□□□□ -1.28
RTTN-215ENST00000639487 M0QZ92 97 aa7.03□□□□□ -1.28
RTTN-215ENST00000639487 CFBP00751 764 aa7.03□□□□□ -1.28
RTTN-215ENST00000639487 PGK2P07205 417 aa7.03□□□□□ -1.28
RTTN-215ENST00000639487 MYBL1P10243 752 aa7.03□□□□□ -1.28
RTTN-215ENST00000639487 CYP2C9P11712 490 aa7.03□□□□□ -1.28
RTTN-215ENST00000639487 ZRSR2Q15696 482 aaKnown RBP7.03□□□□□ -1.28
RTTN-215ENST00000639487 PPP1R15BQ5SWA1 713 aa7.03□□□□□ -1.28
RTTN-215ENST00000639487 EFCAB12Q6NXP0 572 aa7.03□□□□□ -1.28
RTTN-215ENST00000639487 ZNF449Q6P9G9 518 aa7.03□□□□□ -1.28
RTTN-215ENST00000639487 ANKS3Q6ZW76 656 aa7.03□□□□□ -1.28
RTTN-215ENST00000639487 UBALD2Q8IYN6 164 aa7.03□□□□□ -1.28
RTTN-215ENST00000639487 TNS4Q8IZW8 715 aa7.03□□□□□ -1.28
RTTN-215ENST00000639487 SPPL2BQ8TCT7 592 aa7.03□□□□□ -1.28
RTTN-215ENST00000639487 SYAP1Q96A49 352 aaPredicted RBP7.03□□□□□ -1.28
RTTN-215ENST00000639487 FAM129AQ9BZQ8 928 aa7.03□□□□□ -1.28
RTTN-215ENST00000639487 MIS12Q9H081 205 aa7.03□□□□□ -1.28
RTTN-215ENST00000639487 GOLPH3LQ9H4A5 285 aa7.03□□□□□ -1.28
RTTN-215ENST00000639487 NSUN3Q9H649 340 aaKnown RBP7.03□□□□□ -1.28
RTTN-215ENST00000639487 NCOA5Q9HCD5 579 aaKnown RBP7.03□□□□□ -1.28
RTTN-215ENST00000639487 CD248Q9HCU0 757 aa7.03□□□□□ -1.28
RTTN-215ENST00000639487 AFF4Q9UHB7 1163 aaKnown RBP7.03□□□□□ -1.28
RTTN-215ENST00000639487 SIK3Q9Y2K2 1263 aa7.03□□□□□ -1.28
RTTN-215ENST00000639487 NOC2LQ9Y3T9 749 aaKnown RBP7.03□□□□□ -1.28
RTTN-215ENST00000639487 IGLV3-10A0A075B6K4 115 aa7.03□□□□□ -1.28
RTTN-215ENST00000639487 SSU72P8A0A1W2PR75 194 aa7.03□□□□□ -1.28
RTTN-215ENST00000639487 ALOX15BO15296 676 aa7.03□□□□□ -1.28
RTTN-215ENST00000639487 CYP1A1P04798 512 aaPredicted RBP7.03□□□□□ -1.28
RTTN-215ENST00000639487 HOXC4P09017 264 aaPredicted RBP7.03□□□□□ -1.28
RTTN-215ENST00000639487 EIF2AK2P19525 551 aaKnown RBP7.03□□□□□ -1.28
RTTN-215ENST00000639487 CYP2C19P33261 490 aa7.03□□□□□ -1.28
RTTN-215ENST00000639487 MTHFRP42898 656 aa7.03□□□□□ -1.28
RTTN-215ENST00000639487 COL13A1Q5TAT6 717 aaPredicted RBP7.03□□□□□ -1.28
RTTN-215ENST00000639487 Q6ZNB5 142 aa7.03□□□□□ -1.28
RTTN-215ENST00000639487 BHLHA9Q7RTU4 235 aa7.03□□□□□ -1.28
RTTN-215ENST00000639487 CCDC82Q8N4S0 544 aa7.03□□□□□ -1.28
RTTN-215ENST00000639487 C1orf131Q8NDD1 294 aaKnown RBP7.03□□□□□ -1.28
RTTN-215ENST00000639487 URGCPQ8TCY9 931 aa7.03□□□□□ -1.28
RTTN-215ENST00000639487 DPF3Q92784 378 aa7.03□□□□□ -1.28
RTTN-215ENST00000639487 TADA1Q96BN2 335 aa7.03□□□□□ -1.28
RTTN-215ENST00000639487 MRFAP1L1Q96HT8 127 aa7.03□□□□□ -1.28
RTTN-215ENST00000639487 COLEC11Q9BWP8 271 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms