RNA–Protein interactions for RNA: ENST00000636389.1

CACNA1A-225, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 8,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-225ENST00000636389 STON1Q9Y6Q2 735 aa18.35■□□□□ 0.53
CACNA1A-225ENST00000636389 AIM2O14862 343 aa18.35■□□□□ 0.53
CACNA1A-225ENST00000636389 PRKAB2O43741 272 aa18.35■□□□□ 0.53
CACNA1A-225ENST00000636389 CAND2O75155 1236 aa18.35■□□□□ 0.53
CACNA1A-225ENST00000636389 RGS2P41220 211 aa18.35■□□□□ 0.53
CACNA1A-225ENST00000636389 KPNA1P52294 538 aaPredicted RBP18.35■□□□□ 0.53
CACNA1A-225ENST00000636389 GYS2P54840 703 aa18.35■□□□□ 0.53
CACNA1A-225ENST00000636389 COX10Q12887 443 aa18.35■□□□□ 0.53
CACNA1A-225ENST00000636389 PCYOX1LQ8NBM8 494 aa18.35■□□□□ 0.53
CACNA1A-225ENST00000636389 ECSITQ9BQ95 431 aa18.35■□□□□ 0.53
CACNA1A-225ENST00000636389 PIM2Q9P1W9 311 aa18.35■□□□□ 0.53
CACNA1A-225ENST00000636389 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.34■□□□□ 0.53
CACNA1A-225ENST00000636389 HDHD2Q9H0R4 259 aa18.34■□□□□ 0.53
CACNA1A-225ENST00000636389 CHRM3P20309 590 aa18.34■□□□□ 0.53
CACNA1A-225ENST00000636389 FGFR4P22455 802 aa18.34■□□□□ 0.53
CACNA1A-225ENST00000636389 RASGRF1Q13972 1273 aa18.34■□□□□ 0.53
CACNA1A-225ENST00000636389 SLC39A14Q15043 492 aa18.34■□□□□ 0.53
CACNA1A-225ENST00000636389 SENP2Q9HC62 589 aa18.34■□□□□ 0.53
CACNA1A-225ENST00000636389 PYCARDQ9ULZ3 195 aa18.34■□□□□ 0.53
CACNA1A-225ENST00000636389 SNX17Q15036 470 aa18.34■□□□□ 0.53
CACNA1A-225ENST00000636389 ZNF560Q96MR9 790 aa18.34■□□□□ 0.53
CACNA1A-225ENST00000636389 COQ6Q9Y2Z9 468 aa18.34■□□□□ 0.53
CACNA1A-225ENST00000636389 TTLL13PA6NNM8 815 aa18.34■□□□□ 0.53
CACNA1A-225ENST00000636389 USP10Q14694 798 aaKnown RBP18.34■□□□□ 0.53
CACNA1A-225ENST00000636389 CALML6Q8TD86 181 aa18.34■□□□□ 0.53
CACNA1A-225ENST00000636389 RNF181Q9P0P0 153 aa18.34■□□□□ 0.53
CACNA1A-225ENST00000636389 LCORLQ8N3X6 602 aa18.34■□□□□ 0.53
CACNA1A-225ENST00000636389 ADAM21Q9UKJ8 722 aa18.34■□□□□ 0.53
CACNA1A-225ENST00000636389 COL17A1Q9UMD9 1497 aaPredicted RBP18.34■□□□□ 0.53
CACNA1A-225ENST00000636389 TFRCP02786 760 aaKnown RBP18.34■□□□□ 0.53
CACNA1A-225ENST00000636389 HAUS6Q7Z4H7 955 aa18.34■□□□□ 0.53
CACNA1A-225ENST00000636389 FRMD6Q96NE9 622 aa18.34■□□□□ 0.53
CACNA1A-225ENST00000636389 XPO7Q9UIA9 1087 aaKnown RBP18.34■□□□□ 0.53
CACNA1A-225ENST00000636389 NUMBP49757 651 aa18.33■□□□□ 0.53
CACNA1A-225ENST00000636389 CNGA2Q16280 664 aa18.33■□□□□ 0.53
CACNA1A-225ENST00000636389 C16orf89Q6UX73 402 aa18.33■□□□□ 0.53
CACNA1A-225ENST00000636389 TMEM179Q6ZVK1 233 aa18.33■□□□□ 0.53
CACNA1A-225ENST00000636389 GPT2Q8TD30 523 aa18.33■□□□□ 0.53
CACNA1A-225ENST00000636389 POLG2Q9UHN1 485 aa18.33■□□□□ 0.53
CACNA1A-225ENST00000636389 GGT7Q9UJ14 662 aa18.33■□□□□ 0.53
CACNA1A-225ENST00000636389 MTMR6Q9Y217 621 aa18.33■□□□□ 0.53
CACNA1A-225ENST00000636389 THOC2Q8NI27 1593 aaKnown RBP18.33■□□□□ 0.53
CACNA1A-225ENST00000636389 PIPSLA2A3N6 862 aa18.33■□□□□ 0.53
CACNA1A-225ENST00000636389 MACC1Q6ZN28 852 aa18.33■□□□□ 0.53
CACNA1A-225ENST00000636389 APOBEC3FQ8IUX4 373 aaKnown RBP18.33■□□□□ 0.53
CACNA1A-225ENST00000636389 STAMBPL1Q96FJ0 436 aa18.33■□□□□ 0.53
CACNA1A-225ENST00000636389 TCP11X1B4DZS4 312 aa18.33■□□□□ 0.53
CACNA1A-225ENST00000636389 PCNAP12004 261 aa18.33■□□□□ 0.53
CACNA1A-225ENST00000636389 GGCXP38435 758 aa18.33■□□□□ 0.53
CACNA1A-225ENST00000636389 NCF4Q15080 339 aa18.33■□□□□ 0.53
CACNA1A-225ENST00000636389 C11orf57Q6ZUT1 292 aaPredicted RBP18.33■□□□□ 0.53
CACNA1A-225ENST00000636389 SEPT3Q9UH03 358 aa18.33■□□□□ 0.53
CACNA1A-225ENST00000636389 PADI4Q9UM07 663 aa18.33■□□□□ 0.53
CACNA1A-225ENST00000636389 TMED10P49755 219 aaKnown RBP18.33■□□□□ 0.52
CACNA1A-225ENST00000636389 PGS1Q32NB8 556 aa18.33■□□□□ 0.52
CACNA1A-225ENST00000636389 MOSPD2Q8NHP6 518 aa18.33■□□□□ 0.52
CACNA1A-225ENST00000636389 MTRF1O75570 445 aaKnown RBP18.33■□□□□ 0.52
CACNA1A-225ENST00000636389 WNT8AQ9H1J5 351 aa18.33■□□□□ 0.52
CACNA1A-225ENST00000636389 NMRK2Q9NPI5 230 aa18.33■□□□□ 0.52
CACNA1A-225ENST00000636389 MLH3Q9UHC1 1453 aa18.33■□□□□ 0.52
CACNA1A-225ENST00000636389 PCCAP05165 728 aaPredicted RBP18.33■□□□□ 0.52
CACNA1A-225ENST00000636389 EIF4A1P60842 406 aaKnown RBP18.33■□□□□ 0.52
CACNA1A-225ENST00000636389 PPP2R2AP63151 447 aa18.33■□□□□ 0.52
CACNA1A-225ENST00000636389 ACTN3Q08043 901 aaPredicted RBP18.33■□□□□ 0.52
CACNA1A-225ENST00000636389 EXO5Q9H790 373 aa18.33■□□□□ 0.52
CACNA1A-225ENST00000636389 HDAC6Q9UBN7 1215 aa18.33■□□□□ 0.52
CACNA1A-225ENST00000636389 TNPO2O14787 897 aaKnown RBP18.33■□□□□ 0.52
CACNA1A-225ENST00000636389 PSMC3P17980 439 aa18.33■□□□□ 0.52
CACNA1A-225ENST00000636389 RRM2P31350 389 aa18.33■□□□□ 0.52
CACNA1A-225ENST00000636389 RGS7P49802 495 aa18.33■□□□□ 0.52
CACNA1A-225ENST00000636389 UBE3CQ15386 1083 aa18.33■□□□□ 0.52
CACNA1A-225ENST00000636389 RABGAP1LQ5R372 815 aa18.33■□□□□ 0.52
CACNA1A-225ENST00000636389 OR8H2Q8N162 312 aa18.33■□□□□ 0.52
CACNA1A-225ENST00000636389 MMGT1Q8N4V1 131 aa18.33■□□□□ 0.52
CACNA1A-225ENST00000636389 PCDHB6Q9Y5E3 794 aa18.33■□□□□ 0.52
CACNA1A-225ENST00000636389 SNX8Q9Y5X2 465 aa18.33■□□□□ 0.52
CACNA1A-225ENST00000636389 CCDC188H7C350 402 aa18.32■□□□□ 0.52
CACNA1A-225ENST00000636389 BIRC5O15392 142 aa18.32■□□□□ 0.52
CACNA1A-225ENST00000636389 GPSM2P81274 684 aa18.32■□□□□ 0.52
CACNA1A-225ENST00000636389 CAMK2GQ13555 558 aaPredicted RBP18.32■□□□□ 0.52
CACNA1A-225ENST00000636389 RTL3Q8N8U3 475 aaKnown RBP18.32■□□□□ 0.52
CACNA1A-225ENST00000636389 C19orf18Q8NEA5 215 aa18.32■□□□□ 0.52
CACNA1A-225ENST00000636389 SPACA7Q96KW9 195 aa18.32■□□□□ 0.52
CACNA1A-225ENST00000636389 OLFM1Q99784 485 aa18.32■□□□□ 0.52
CACNA1A-225ENST00000636389 PUS3Q9BZE2 481 aaKnown RBP18.32■□□□□ 0.52
CACNA1A-225ENST00000636389 NUP160Q12769 1436 aa18.32■□□□□ 0.52
CACNA1A-225ENST00000636389 PSMD3O43242 534 aa18.32■□□□□ 0.52
CACNA1A-225ENST00000636389 POU4F1Q01851 419 aa18.32■□□□□ 0.52
CACNA1A-225ENST00000636389 SH3RF3Q8TEJ3 882 aaPredicted RBP18.32■□□□□ 0.52
CACNA1A-225ENST00000636389 DCAF4Q8WV16 495 aa18.32■□□□□ 0.52
CACNA1A-225ENST00000636389 CALR3Q96L12 384 aaKnown RBP18.32■□□□□ 0.52
CACNA1A-225ENST00000636389 FBXO40Q9UH90 709 aa18.32■□□□□ 0.52
CACNA1A-225ENST00000636389 GMNCA6NCL1 334 aa18.32■□□□□ 0.52
CACNA1A-225ENST00000636389 MICU2Q8IYU8 434 aa18.32■□□□□ 0.52
CACNA1A-225ENST00000636389 MRPL48Q96GC5 212 aaKnown RBP18.32■□□□□ 0.52
CACNA1A-225ENST00000636389 NARS2Q96I59 477 aaKnown RBP18.32■□□□□ 0.52
CACNA1A-225ENST00000636389 ATP6V1HQ9UI12 483 aa18.32■□□□□ 0.52
CACNA1A-225ENST00000636389 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.32■□□□□ 0.52
CACNA1A-225ENST00000636389 GALNTL6Q49A17 601 aa18.32■□□□□ 0.52
CACNA1A-225ENST00000636389 HEATR4Q86WZ0 1026 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms