RNA–Protein interactions for RNA: ENST00000592186.5

SMAD4-214, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,306 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-214ENST00000592186 GATMP50440 423 aa11.49□□□□□ -0.57
SMAD4-214ENST00000592186 EXOC3L4Q17RC7 722 aa11.49□□□□□ -0.57
SMAD4-214ENST00000592186 SV2CQ496J9 727 aa11.49□□□□□ -0.57
SMAD4-214ENST00000592186 CBWD6Q4V339 395 aa11.49□□□□□ -0.57
SMAD4-214ENST00000592186 PAN2Q504Q3 1202 aaKnown RBP11.49□□□□□ -0.57
SMAD4-214ENST00000592186 CBWD3Q5JTY5 395 aa11.49□□□□□ -0.57
SMAD4-214ENST00000592186 CBWD5Q5RIA9 395 aa11.49□□□□□ -0.57
SMAD4-214ENST00000592186 SPOUT1Q5T280 376 aaKnown RBP11.49□□□□□ -0.57
SMAD4-214ENST00000592186 LMBRD2Q68DH5 695 aaPredicted RBP11.49□□□□□ -0.57
SMAD4-214ENST00000592186 TMCO2Q7Z6W1 182 aaPredicted RBP11.49□□□□□ -0.57
SMAD4-214ENST00000592186 EHBP1Q8NDI1 1231 aa11.49□□□□□ -0.57
SMAD4-214ENST00000592186 CLP1Q92989 425 aaKnown RBP11.49□□□□□ -0.57
SMAD4-214ENST00000592186 HPDLQ96IR7 371 aa11.49□□□□□ -0.57
SMAD4-214ENST00000592186 ZNF558Q96NG5 402 aa11.49□□□□□ -0.57
SMAD4-214ENST00000592186 CWH43Q9H720 699 aa11.49□□□□□ -0.57
SMAD4-214ENST00000592186 MMRN2Q9H8L6 949 aa11.49□□□□□ -0.57
SMAD4-214ENST00000592186 VRTNQ9H8Y1 702 aa11.49□□□□□ -0.57
SMAD4-214ENST00000592186 PCDH10Q9P2E7 1040 aa11.49□□□□□ -0.57
SMAD4-214ENST00000592186 TUBGCP4Q9UGJ1 667 aa11.49□□□□□ -0.57
SMAD4-214ENST00000592186 MSRAQ9UJ68 235 aa11.49□□□□□ -0.57
SMAD4-214ENST00000592186 DAAM1Q9Y4D1 1078 aa11.49□□□□□ -0.57
SMAD4-214ENST00000592186 TNRC18O15417 2968 aaPredicted RBP11.48□□□□□ -0.57
SMAD4-214ENST00000592186 A0A1W2PQC6 194 aa11.48□□□□□ -0.57
SMAD4-214ENST00000592186 CASTOR2A6NHX0 329 aa11.48□□□□□ -0.57
SMAD4-214ENST00000592186 TMEM189-UBE2V1I3L0A0 370 aa11.48□□□□□ -0.57
SMAD4-214ENST00000592186 PODXLO00592 558 aa11.48□□□□□ -0.57
SMAD4-214ENST00000592186 NRP1O14786 923 aa11.48□□□□□ -0.57
SMAD4-214ENST00000592186 TADA2AO75478 443 aa11.48□□□□□ -0.57
SMAD4-214ENST00000592186 B3GAT3O94766 335 aa11.48□□□□□ -0.57
SMAD4-214ENST00000592186 CST3P01034 146 aaPredicted RBP11.48□□□□□ -0.57
SMAD4-214ENST00000592186 HLA-DRAP01903 254 aa11.48□□□□□ -0.57
SMAD4-214ENST00000592186 POLR2BP30876 1174 aaKnown RBP11.48□□□□□ -0.57
SMAD4-214ENST00000592186 PPM1AP35813 382 aa11.48□□□□□ -0.57
SMAD4-214ENST00000592186 PIK3CAP42336 1068 aa11.48□□□□□ -0.57
SMAD4-214ENST00000592186 OR1G1P47890 313 aa11.48□□□□□ -0.57
SMAD4-214ENST00000592186 TAF6P49848 677 aa11.48□□□□□ -0.57
SMAD4-214ENST00000592186 CLCNKBP51801 687 aa11.48□□□□□ -0.57
SMAD4-214ENST00000592186 BCAR1P56945 870 aa11.48□□□□□ -0.57
SMAD4-214ENST00000592186 LILRA4P59901 499 aa11.48□□□□□ -0.57
SMAD4-214ENST00000592186 PLCB2Q00722 1185 aa11.48□□□□□ -0.57
SMAD4-214ENST00000592186 KRT17Q04695 432 aa11.48□□□□□ -0.57
SMAD4-214ENST00000592186 SOX4Q06945 474 aaPredicted RBP11.48□□□□□ -0.57
SMAD4-214ENST00000592186 ELAVL2Q12926 359 aaKnown RBP11.48□□□□□ -0.57
SMAD4-214ENST00000592186 EPC2Q52LR7 807 aa11.48□□□□□ -0.57
SMAD4-214ENST00000592186 KCNT2Q6UVM3 1135 aa11.48□□□□□ -0.57
SMAD4-214ENST00000592186 CXorf38Q8TB03 319 aa11.48□□□□□ -0.57
SMAD4-214ENST00000592186 TAS1R2Q8TE23 839 aa11.48□□□□□ -0.57
SMAD4-214ENST00000592186 SAMD11Q96NU1 681 aa11.48□□□□□ -0.57
SMAD4-214ENST00000592186 ERGIC2Q96RQ1 377 aa11.48□□□□□ -0.57
SMAD4-214ENST00000592186 PLVAPQ9BX97 442 aa11.48□□□□□ -0.57
SMAD4-214ENST00000592186 TRIM5Q9C035 493 aa11.48□□□□□ -0.57
SMAD4-214ENST00000592186 PRO3102Q9H379 93 aa11.48□□□□□ -0.57
SMAD4-214ENST00000592186 FAM124BQ9H5Z6 455 aaPredicted RBP11.48□□□□□ -0.57
SMAD4-214ENST00000592186 SPG21Q9NZD8 308 aa11.48□□□□□ -0.57
SMAD4-214ENST00000592186 IFNKQ9P0W0 207 aa11.48□□□□□ -0.57
SMAD4-214ENST00000592186 SIX4Q9UIU6 781 aa11.48□□□□□ -0.57
SMAD4-214ENST00000592186 NUB1Q9Y5A7 615 aa11.48□□□□□ -0.57
SMAD4-214ENST00000592186 MICAL3Q7RTP6 2002 aa11.48□□□□□ -0.57
SMAD4-214ENST00000592186 FSD2A1L4K1 749 aa11.47□□□□□ -0.57
SMAD4-214ENST00000592186 KPNA7A9QM74 516 aa11.47□□□□□ -0.57
SMAD4-214ENST00000592186 RBAK-RBAKDNI3L0D1 243 aa11.47□□□□□ -0.57
SMAD4-214ENST00000592186 VNN1O95497 513 aa11.47□□□□□ -0.57
SMAD4-214ENST00000592186 ASS1P00966 412 aaKnown RBP11.47□□□□□ -0.57
SMAD4-214ENST00000592186 RB1P06400 928 aa11.47□□□□□ -0.57
SMAD4-214ENST00000592186 CLCN1P35523 988 aa11.47□□□□□ -0.57
SMAD4-214ENST00000592186 MRE11P49959 708 aa11.47□□□□□ -0.57
SMAD4-214ENST00000592186 MYL6P60660 151 aa11.47□□□□□ -0.57
SMAD4-214ENST00000592186 SMAD3P84022 425 aaKnown RBP11.47□□□□□ -0.57
SMAD4-214ENST00000592186 ZNF667Q5HYK9 610 aa11.47□□□□□ -0.57
SMAD4-214ENST00000592186 ENOSF1Q7L5Y1 443 aa11.47□□□□□ -0.57
SMAD4-214ENST00000592186 DPH6Q7L8W6 267 aa11.47□□□□□ -0.57
SMAD4-214ENST00000592186 TTC39CQ8N584 583 aa11.47□□□□□ -0.57
SMAD4-214ENST00000592186 JAKMIP2Q96AA8 810 aa11.47□□□□□ -0.57
SMAD4-214ENST00000592186 IQCDQ96DY2 449 aa11.47□□□□□ -0.57
SMAD4-214ENST00000592186 NAP1L5Q96NT1 182 aaPredicted RBP11.47□□□□□ -0.57
SMAD4-214ENST00000592186 NUP58Q9BVL2 599 aa11.47□□□□□ -0.57
SMAD4-214ENST00000592186 DNAI2Q9GZS0 605 aa11.47□□□□□ -0.57
SMAD4-214ENST00000592186 INTS2Q9H0H0 1204 aaKnown RBP11.47□□□□□ -0.57
SMAD4-214ENST00000592186 GRPEL1Q9HAV7 217 aa11.47□□□□□ -0.57
SMAD4-214ENST00000592186 GDAP2Q9NXN4 497 aa11.47□□□□□ -0.57
SMAD4-214ENST00000592186 GCNT4Q9P109 453 aa11.47□□□□□ -0.57
SMAD4-214ENST00000592186 DNAJB4Q9UDY4 337 aa11.47□□□□□ -0.57
SMAD4-214ENST00000592186 MRPL42Q9Y6G3 142 aaKnown RBP11.47□□□□□ -0.57
SMAD4-214ENST00000592186 RFX1P22670 979 aa11.46□□□□□ -0.57
SMAD4-214ENST00000592186 TBXAS1P24557 533 aaPredicted RBP11.46□□□□□ -0.57
SMAD4-214ENST00000592186 PON1P27169 355 aa11.46□□□□□ -0.57
SMAD4-214ENST00000592186 BMPR1AP36894 532 aa11.46□□□□□ -0.57
SMAD4-214ENST00000592186 SLC11A1P49279 550 aa11.46□□□□□ -0.57
SMAD4-214ENST00000592186 GUCY2FP51841 1108 aa11.46□□□□□ -0.57
SMAD4-214ENST00000592186 RABGGTBP53611 331 aa11.46□□□□□ -0.57
SMAD4-214ENST00000592186 TNNC1P63316 161 aa11.46□□□□□ -0.57
SMAD4-214ENST00000592186 ZNF699Q32M78 642 aa11.46□□□□□ -0.57
SMAD4-214ENST00000592186 WDR72Q3MJ13 1102 aa11.46□□□□□ -0.57
SMAD4-214ENST00000592186 TRIM65Q6PJ69 517 aa11.46□□□□□ -0.57
SMAD4-214ENST00000592186 PIP4P2Q8N4L2 257 aa11.46□□□□□ -0.57
SMAD4-214ENST00000592186 COLGALT1Q8NBJ5 622 aa11.46□□□□□ -0.57
SMAD4-214ENST00000592186 LMO3Q8TAP4 145 aa11.46□□□□□ -0.57
SMAD4-214ENST00000592186 SPATA18Q8TC71 538 aa11.46□□□□□ -0.57
SMAD4-214ENST00000592186 SEMA4DQ92854 862 aa11.46□□□□□ -0.57
SMAD4-214ENST00000592186 PCMTD1Q96MG8 357 aaPredicted RBP11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms