RNA–Protein interactions for RNA: ENST00000580061.5

CSNK1D-212, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-212ENST00000580061 PCDHA11Q9Y5I1 949 aa17.14■□□□□ 0.33
CSNK1D-212ENST00000580061 NRP1O14786 923 aa17.13■□□□□ 0.33
CSNK1D-212ENST00000580061 AP5Z1O43299 807 aa17.13■□□□□ 0.33
CSNK1D-212ENST00000580061 ALDH2P05091 517 aa17.13■□□□□ 0.33
CSNK1D-212ENST00000580061 GALTP07902 379 aa17.13■□□□□ 0.33
CSNK1D-212ENST00000580061 LINC00271P0C7V0 271 aa17.13■□□□□ 0.33
CSNK1D-212ENST00000580061 MYOGP15173 224 aa17.13■□□□□ 0.33
CSNK1D-212ENST00000580061 PIK3CAP42336 1068 aa17.13■□□□□ 0.33
CSNK1D-212ENST00000580061 SLC11A1P49279 550 aa17.13■□□□□ 0.33
CSNK1D-212ENST00000580061 UBASH3AP57075 661 aa17.13■□□□□ 0.33
CSNK1D-212ENST00000580061 CETN1Q12798 172 aa17.13■□□□□ 0.33
CSNK1D-212ENST00000580061 NR1I3Q14994 352 aa17.13■□□□□ 0.33
CSNK1D-212ENST00000580061 FKBP15Q5T1M5 1219 aa17.13■□□□□ 0.33
CSNK1D-212ENST00000580061 SPOUT1Q5T280 376 aaKnown RBP17.13■□□□□ 0.33
CSNK1D-212ENST00000580061 SARM1Q6SZW1 724 aa17.13■□□□□ 0.33
CSNK1D-212ENST00000580061 LRRC52Q8N7C0 313 aa17.13■□□□□ 0.33
CSNK1D-212ENST00000580061 C3orf58Q8NDZ4 430 aa17.13■□□□□ 0.33
CSNK1D-212ENST00000580061 RABGGTAQ92696 567 aa17.13■□□□□ 0.33
CSNK1D-212ENST00000580061 SEMA4DQ92854 862 aa17.13■□□□□ 0.33
CSNK1D-212ENST00000580061 IFNKQ9P0W0 207 aa17.13■□□□□ 0.33
CSNK1D-212ENST00000580061 R3HCC1Q9Y3T6 440 aaKnown RBP17.13■□□□□ 0.33
CSNK1D-212ENST00000580061 FSD2A1L4K1 749 aa17.12■□□□□ 0.33
CSNK1D-212ENST00000580061 TMEM189-UBE2V1I3L0A0 370 aa17.12■□□□□ 0.33
CSNK1D-212ENST00000580061 TEX33O43247 280 aa17.12■□□□□ 0.33
CSNK1D-212ENST00000580061 LRRN2O75325 713 aa17.12■□□□□ 0.33
CSNK1D-212ENST00000580061 STAU1O95793 577 aaKnown RBP17.12■□□□□ 0.33
CSNK1D-212ENST00000580061 LAG3P18627 525 aa17.12■□□□□ 0.33
CSNK1D-212ENST00000580061 IGFBP6P24592 240 aaPredicted RBP17.12■□□□□ 0.33
CSNK1D-212ENST00000580061 ATICP31939 592 aa17.12■□□□□ 0.33
CSNK1D-212ENST00000580061 MYL6P60660 151 aa17.12■□□□□ 0.33
CSNK1D-212ENST00000580061 UBXN1Q04323 297 aa17.12■□□□□ 0.33
CSNK1D-212ENST00000580061 KCNMA1Q12791 1236 aa17.12■□□□□ 0.33
CSNK1D-212ENST00000580061 DCLRE1AQ6PJP8 1040 aa17.12■□□□□ 0.33
CSNK1D-212ENST00000580061 KCNT2Q6UVM3 1135 aa17.12■□□□□ 0.33
CSNK1D-212ENST00000580061 GBP6Q6ZN66 633 aa17.12■□□□□ 0.33
CSNK1D-212ENST00000580061 LMO3Q8TAP4 145 aa17.12■□□□□ 0.33
CSNK1D-212ENST00000580061 CLP1Q92989 425 aaKnown RBP17.12■□□□□ 0.33
CSNK1D-212ENST00000580061 XYLT2Q9H1B5 865 aa17.12■□□□□ 0.33
CSNK1D-212ENST00000580061 MARCH5Q9NX47 278 aa17.12■□□□□ 0.33
CSNK1D-212ENST00000580061 GCNT4Q9P109 453 aa17.12■□□□□ 0.33
CSNK1D-212ENST00000580061 FAN1Q9Y2M0 1017 aa17.12■□□□□ 0.33
CSNK1D-212ENST00000580061 PRG3Q9Y2Y8 225 aaPredicted RBP17.12■□□□□ 0.33
CSNK1D-212ENST00000580061 LINC01553A4QN01 128 aa17.11■□□□□ 0.33
CSNK1D-212ENST00000580061 CARNS1A5YM72 827 aa17.11■□□□□ 0.33
CSNK1D-212ENST00000580061 GOLGA6L3A6NEY3 463 aa17.11■□□□□ 0.33
CSNK1D-212ENST00000580061 NT5C1B-RDH14C9J2C7 533 aa17.11■□□□□ 0.33
CSNK1D-212ENST00000580061 F8W810 466 aa17.11■□□□□ 0.33
CSNK1D-212ENST00000580061 B3GAT3O94766 335 aa17.11■□□□□ 0.33
CSNK1D-212ENST00000580061 KIF4AO95239 1232 aa17.11■□□□□ 0.33
CSNK1D-212ENST00000580061 ASS1P00966 412 aaKnown RBP17.11■□□□□ 0.33
CSNK1D-212ENST00000580061 PBX2P40425 430 aa17.11■□□□□ 0.33
CSNK1D-212ENST00000580061 PBX3P40426 434 aa17.11■□□□□ 0.33
CSNK1D-212ENST00000580061 PNPLA4P41247 253 aa17.11■□□□□ 0.33
CSNK1D-212ENST00000580061 ALDH7A1P49419 539 aaKnown RBP17.11■□□□□ 0.33
CSNK1D-212ENST00000580061 TAF6P49848 677 aa17.11■□□□□ 0.33
CSNK1D-212ENST00000580061 PLCB2Q00722 1185 aa17.11■□□□□ 0.33
CSNK1D-212ENST00000580061 EXOC3L4Q17RC7 722 aa17.11■□□□□ 0.33
CSNK1D-212ENST00000580061 SGSM1Q2NKQ1 1148 aa17.11■□□□□ 0.33
CSNK1D-212ENST00000580061 CD300LGQ6UXG3 332 aa17.11■□□□□ 0.33
CSNK1D-212ENST00000580061 COLGALT1Q8NBJ5 622 aa17.11■□□□□ 0.33
CSNK1D-212ENST00000580061 EHBP1Q8NDI1 1231 aa17.11■□□□□ 0.33
CSNK1D-212ENST00000580061 TAF4BQ92750 862 aa17.11■□□□□ 0.33
CSNK1D-212ENST00000580061 HPDLQ96IR7 371 aa17.11■□□□□ 0.33
CSNK1D-212ENST00000580061 ZNF560Q96MR9 790 aa17.11■□□□□ 0.33
CSNK1D-212ENST00000580061 ZNF558Q96NG5 402 aa17.11■□□□□ 0.33
CSNK1D-212ENST00000580061 CRACR2AQ9BSW2 395 aa17.11■□□□□ 0.33
CSNK1D-212ENST00000580061 PI4K2AQ9BTU6 479 aa17.11■□□□□ 0.33
CSNK1D-212ENST00000580061 COLEC11Q9BWP8 271 aa17.11■□□□□ 0.33
CSNK1D-212ENST00000580061 PBX4Q9BYU1 374 aa17.11■□□□□ 0.33
CSNK1D-212ENST00000580061 XPO4Q9C0E2 1151 aaKnown RBP17.11■□□□□ 0.33
CSNK1D-212ENST00000580061 VRTNQ9H8Y1 702 aa17.11■□□□□ 0.33
CSNK1D-212ENST00000580061 AAASQ9NRG9 546 aa17.11■□□□□ 0.33
CSNK1D-212ENST00000580061 YBX2Q9Y2T7 364 aaKnown RBP17.11■□□□□ 0.33
CSNK1D-212ENST00000580061 LAMA3Q16787 3333 aa17.11■□□□□ 0.33
CSNK1D-212ENST00000580061 PLXNA4Q9HCM2 1894 aa17.1■□□□□ 0.33
CSNK1D-212ENST00000580061 A0A1W2PPC1 479 aa17.1■□□□□ 0.33
CSNK1D-212ENST00000580061 SPTLC1O15269 473 aa17.1■□□□□ 0.33
CSNK1D-212ENST00000580061 CBFA2T2O43439 604 aa17.1■□□□□ 0.33
CSNK1D-212ENST00000580061 ARHGEF15O94989 841 aa17.1■□□□□ 0.33
CSNK1D-212ENST00000580061 ITGB1P05556 798 aa17.1■□□□□ 0.33
CSNK1D-212ENST00000580061 CA3P07451 260 aa17.1■□□□□ 0.33
CSNK1D-212ENST00000580061 SLC9A1P19634 815 aa17.1■□□□□ 0.33
CSNK1D-212ENST00000580061 PAX3P23760 479 aa17.1■□□□□ 0.33
CSNK1D-212ENST00000580061 PON1P27169 355 aa17.1■□□□□ 0.33
CSNK1D-212ENST00000580061 LILRA4P59901 499 aa17.1■□□□□ 0.33
CSNK1D-212ENST00000580061 MYO1EQ12965 1108 aa17.1■□□□□ 0.33
CSNK1D-212ENST00000580061 RAB30Q15771 203 aa17.1■□□□□ 0.33
CSNK1D-212ENST00000580061 ZNF699Q32M78 642 aa17.1■□□□□ 0.33
CSNK1D-212ENST00000580061 SV2CQ496J9 727 aa17.1■□□□□ 0.33
CSNK1D-212ENST00000580061 TMEM173Q86WV6 379 aaPredicted RBP17.1■□□□□ 0.33
CSNK1D-212ENST00000580061 SLC39A11Q8N1S5 342 aa17.1■□□□□ 0.33
CSNK1D-212ENST00000580061 ELMO3Q96BJ8 720 aa17.1■□□□□ 0.33
CSNK1D-212ENST00000580061 ERGIC2Q96RQ1 377 aa17.1■□□□□ 0.33
CSNK1D-212ENST00000580061 IMPG2Q9BZV3 1241 aa17.1■□□□□ 0.33
CSNK1D-212ENST00000580061 INTS2Q9H0H0 1204 aaKnown RBP17.1■□□□□ 0.33
CSNK1D-212ENST00000580061 TSC2P49815 1807 aa17.1■□□□□ 0.33
CSNK1D-212ENST00000580061 VWA8A3KMH1 1905 aa17.09■□□□□ 0.33
CSNK1D-212ENST00000580061 KPNA7A9QM74 516 aa17.09■□□□□ 0.33
CSNK1D-212ENST00000580061 TADA2AO75478 443 aa17.09■□□□□ 0.33
CSNK1D-212ENST00000580061 AARSP49588 968 aaKnown RBP eCLIP17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms