RNA–Protein interactions for RNA: ENST00000550164.5

SMARCC2-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMARCC2, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-209ENST00000550164 GARSP41250 739 aaKnown RBP10.79□□□□□ -0.68
SMARCC2-209ENST00000550164 DBN1Q16643 649 aa10.79□□□□□ -0.68
SMARCC2-209ENST00000550164 MTDHQ86UE4 582 aaKnown RBP10.79□□□□□ -0.68
SMARCC2-209ENST00000550164 NIM1KQ8IY84 436 aa10.79□□□□□ -0.68
SMARCC2-209ENST00000550164 TAS1R2Q8TE23 839 aa10.79□□□□□ -0.68
SMARCC2-209ENST00000550164 ACAP3Q96P50 834 aa10.79□□□□□ -0.68
SMARCC2-209ENST00000550164 PPP1R16BQ96T49 567 aa10.79□□□□□ -0.68
SMARCC2-209ENST00000550164 ADPGKQ9BRR6 497 aa10.79□□□□□ -0.68
SMARCC2-209ENST00000550164 KLC2Q9H0B6 622 aa10.79□□□□□ -0.68
SMARCC2-209ENST00000550164 POLR3FQ9H1D9 316 aaPredicted RBP10.79□□□□□ -0.68
SMARCC2-209ENST00000550164 DNAJC18Q9H819 358 aa10.79□□□□□ -0.68
SMARCC2-209ENST00000550164 TOPORSQ9NS56 1045 aaPredicted RBP10.79□□□□□ -0.68
SMARCC2-209ENST00000550164 CHST7Q9NS84 486 aa10.79□□□□□ -0.68
SMARCC2-209ENST00000550164 ZFATQ9P243 1243 aa10.79□□□□□ -0.68
SMARCC2-209ENST00000550164 FAF1Q9UNN5 650 aaPredicted RBP10.79□□□□□ -0.68
SMARCC2-209ENST00000550164 TRIM33Q9UPN9 1127 aa10.79□□□□□ -0.68
SMARCC2-209ENST00000550164 NRXN3Q9Y4C0 1643 aa10.79□□□□□ -0.68
SMARCC2-209ENST00000550164 TISP43B9A030 160 aa10.78□□□□□ -0.68
SMARCC2-209ENST00000550164 CAPN9O14815 690 aa10.78□□□□□ -0.68
SMARCC2-209ENST00000550164 HLA-DRAP01903 254 aa10.78□□□□□ -0.68
SMARCC2-209ENST00000550164 ASNSP08243 561 aa10.78□□□□□ -0.68
SMARCC2-209ENST00000550164 TBXAS1P24557 533 aaPredicted RBP10.78□□□□□ -0.68
SMARCC2-209ENST00000550164 SERPINB4P48594 390 aa10.78□□□□□ -0.68
SMARCC2-209ENST00000550164 EIF3EP60228 445 aaKnown RBP10.78□□□□□ -0.68
SMARCC2-209ENST00000550164 CENPCQ03188 943 aa10.78□□□□□ -0.68
SMARCC2-209ENST00000550164 NFX1Q12986 1120 aaKnown RBP10.78□□□□□ -0.68
SMARCC2-209ENST00000550164 MMEL1Q495T6 779 aa10.78□□□□□ -0.68
SMARCC2-209ENST00000550164 COBLL1Q53SF7 1204 aa10.78□□□□□ -0.68
SMARCC2-209ENST00000550164 TAF1BQ53T94 588 aaPredicted RBP10.78□□□□□ -0.68
SMARCC2-209ENST00000550164 SLC27A3Q5K4L6 730 aa10.78□□□□□ -0.68
SMARCC2-209ENST00000550164 C1orf228Q6PIY5 440 aa10.78□□□□□ -0.68
SMARCC2-209ENST00000550164 MOXD1Q6UVY6 613 aa10.78□□□□□ -0.68
SMARCC2-209ENST00000550164 RASSF3Q86WH2 238 aa10.78□□□□□ -0.68
SMARCC2-209ENST00000550164 DNAAF3Q8N9W5 541 aa10.78□□□□□ -0.68
SMARCC2-209ENST00000550164 RBBP8NLQ8NC74 664 aaPredicted RBP10.78□□□□□ -0.68
SMARCC2-209ENST00000550164 PPWD1Q96BP3 646 aaKnown RBP10.78□□□□□ -0.68
SMARCC2-209ENST00000550164 CENPTQ96BT3 561 aa10.78□□□□□ -0.68
SMARCC2-209ENST00000550164 MIS12Q9H081 205 aa10.78□□□□□ -0.68
SMARCC2-209ENST00000550164 ERVK-5Q9HDB9 667 aa10.78□□□□□ -0.68
SMARCC2-209ENST00000550164 POLLQ9UGP5 575 aa10.78□□□□□ -0.68
SMARCC2-209ENST00000550164 FIS1Q9Y3D6 152 aa10.78□□□□□ -0.68
SMARCC2-209ENST00000550164 SLIT3O75094 1523 aa10.78□□□□□ -0.68
SMARCC2-209ENST00000550164 COL5A2P05997 1499 aaPredicted RBP10.78□□□□□ -0.68
SMARCC2-209ENST00000550164 ABCC6O95255 1503 aa10.78□□□□□ -0.68
SMARCC2-209ENST00000550164 CBX6O95503 412 aa10.78□□□□□ -0.68
SMARCC2-209ENST00000550164 LDHAP00338 332 aaKnown RBP10.78□□□□□ -0.68
SMARCC2-209ENST00000550164 MMP10P09238 476 aa10.78□□□□□ -0.68
SMARCC2-209ENST00000550164 TFDP2Q14188 446 aa10.78□□□□□ -0.68
SMARCC2-209ENST00000550164 ZNF699Q32M78 642 aa10.78□□□□□ -0.68
SMARCC2-209ENST00000550164 ACCSLQ4AC99 568 aa10.78□□□□□ -0.68
SMARCC2-209ENST00000550164 ANKRD20A2Q5SQ80 823 aa10.78□□□□□ -0.68
SMARCC2-209ENST00000550164 ANKRD20A1Q5TYW2 823 aa10.78□□□□□ -0.68
SMARCC2-209ENST00000550164 KCNV1Q6PIU1 500 aa10.78□□□□□ -0.68
SMARCC2-209ENST00000550164 EP400NLQ6ZTU2 488 aa10.78□□□□□ -0.68
SMARCC2-209ENST00000550164 RIBC1Q8N443 379 aaPredicted RBP10.78□□□□□ -0.68
SMARCC2-209ENST00000550164 TEX9Q8N6V9 391 aa10.78□□□□□ -0.68
SMARCC2-209ENST00000550164 ATXN2LQ8WWM7 1075 aaKnown RBP10.78□□□□□ -0.68
SMARCC2-209ENST00000550164 PAGR1Q9BTK6 254 aa10.78□□□□□ -0.68
SMARCC2-209ENST00000550164 METTL5Q9NRN9 209 aaKnown RBP10.78□□□□□ -0.68
SMARCC2-209ENST00000550164 KCNH7Q9NS40 1196 aa10.78□□□□□ -0.68
SMARCC2-209ENST00000550164 FBXO28Q9NVF7 368 aa10.78□□□□□ -0.68
SMARCC2-209ENST00000550164 SUGT1Q9Y2Z0 365 aa10.78□□□□□ -0.68
SMARCC2-209ENST00000550164 NR2E1Q9Y466 385 aa10.78□□□□□ -0.68
SMARCC2-209ENST00000550164 ECE2O60344 883 aa10.78□□□□□ -0.68
SMARCC2-209ENST00000550164 CST8O60676 142 aa10.78□□□□□ -0.68
SMARCC2-209ENST00000550164 ECE1P42892 770 aa10.78□□□□□ -0.68
SMARCC2-209ENST00000550164 THOC5Q13769 683 aaKnown RBP10.78□□□□□ -0.68
SMARCC2-209ENST00000550164 PDE1CQ14123 709 aaPredicted RBP10.78□□□□□ -0.68
SMARCC2-209ENST00000550164 ZNF667Q5HYK9 610 aa10.78□□□□□ -0.68
SMARCC2-209ENST00000550164 TEX2Q8IWB9 1127 aa10.78□□□□□ -0.68
SMARCC2-209ENST00000550164 NLRP4Q96MN2 994 aa10.78□□□□□ -0.68
SMARCC2-209ENST00000550164 WWP1Q9H0M0 922 aa10.78□□□□□ -0.68
SMARCC2-209ENST00000550164 MANSC1Q9H8J5 431 aa10.78□□□□□ -0.68
SMARCC2-209ENST00000550164 HNRNPCL1O60812 293 aaKnown RBP10.77□□□□□ -0.68
SMARCC2-209ENST00000550164 CDH6P55285 790 aa10.77□□□□□ -0.68
SMARCC2-209ENST00000550164 PTK7Q13308 1070 aa10.77□□□□□ -0.68
SMARCC2-209ENST00000550164 EAPPQ56P03 285 aaPredicted RBP10.77□□□□□ -0.68
SMARCC2-209ENST00000550164 EXOC3L1Q86VI1 746 aa10.77□□□□□ -0.68
SMARCC2-209ENST00000550164 SP8Q8IXZ3 490 aa10.77□□□□□ -0.68
SMARCC2-209ENST00000550164 NLRP7Q8WX94 980 aa10.77□□□□□ -0.68
SMARCC2-209ENST00000550164 CNKSR1Q969H4 720 aa10.77□□□□□ -0.68
SMARCC2-209ENST00000550164 NSL1Q96IY1 281 aa10.77□□□□□ -0.68
SMARCC2-209ENST00000550164 PWWP2AQ96N64 755 aa10.77□□□□□ -0.68
SMARCC2-209ENST00000550164 FOXP3Q9BZS1 431 aa10.77□□□□□ -0.68
SMARCC2-209ENST00000550164 VPS11Q9H270 941 aa10.77□□□□□ -0.68
SMARCC2-209ENST00000550164 PCDHA10Q9Y5I2 948 aa10.77□□□□□ -0.68
SMARCC2-209ENST00000550164 hCG_2014768A0A024R1R8 64 aa10.77□□□□□ -0.69
SMARCC2-209ENST00000550164 BTNL10A8MVZ5 291 aa10.77□□□□□ -0.69
SMARCC2-209ENST00000550164 KRT3P12035 628 aa10.77□□□□□ -0.69
SMARCC2-209ENST00000550164 EPHB2P29323 1055 aa10.77□□□□□ -0.69
SMARCC2-209ENST00000550164 VHLP40337 213 aa10.77□□□□□ -0.69
SMARCC2-209ENST00000550164 AGR3Q8TD06 166 aa10.77□□□□□ -0.69
SMARCC2-209ENST00000550164 MTBPQ96DY7 904 aa10.77□□□□□ -0.69
SMARCC2-209ENST00000550164 CDHR1Q96JP9 859 aa10.77□□□□□ -0.69
SMARCC2-209ENST00000550164 LRGUKQ96M69 825 aa10.77□□□□□ -0.69
SMARCC2-209ENST00000550164 FAM111AQ96PZ2 611 aa10.77□□□□□ -0.69
SMARCC2-209ENST00000550164 DDX4Q9NQI0 724 aaKnown RBP10.77□□□□□ -0.69
SMARCC2-209ENST00000550164 LRRC4BQ9NT99 713 aa10.77□□□□□ -0.69
SMARCC2-209ENST00000550164 NINJ2Q9NZG7 142 aa10.77□□□□□ -0.69
SMARCC2-209ENST00000550164 XPO7Q9UIA9 1087 aaKnown RBP10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms