RNA–Protein interactions for RNA: ENST00000539890.1

CYB561A3-213, Transcript of cytochrome b561 family member A3, humanhuman

TSL 4 BASIC

Gene CYB561A3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-213ENST00000539890 KIAA1671Q9BY89 1806 aa13.55□□□□□ -0.24
CYB561A3-213ENST00000539890 TDRD15B5MCY1 1934 aaKnown RBP13.54□□□□□ -0.24
CYB561A3-213ENST00000539890 PSMA7O14818 248 aa13.54□□□□□ -0.24
CYB561A3-213ENST00000539890 SYN3O14994 580 aa13.54□□□□□ -0.24
CYB561A3-213ENST00000539890 TEX28O15482 410 aa13.54□□□□□ -0.24
CYB561A3-213ENST00000539890 MEFVO15553 781 aaPredicted RBP13.54□□□□□ -0.24
CYB561A3-213ENST00000539890 GLUD1P00367 558 aa13.54□□□□□ -0.24
CYB561A3-213ENST00000539890 KRT13P13646 458 aa13.54□□□□□ -0.24
CYB561A3-213ENST00000539890 HOXB8P17481 243 aaPredicted RBP13.54□□□□□ -0.24
CYB561A3-213ENST00000539890 FGFR3P22607 806 aa13.54□□□□□ -0.24
CYB561A3-213ENST00000539890 NR2F2P24468 414 aa13.54□□□□□ -0.24
CYB561A3-213ENST00000539890 TKTP29401 623 aaKnown RBP13.54□□□□□ -0.24
CYB561A3-213ENST00000539890 PNPLA4P41247 253 aa13.54□□□□□ -0.24
CYB561A3-213ENST00000539890 TAF6P49848 677 aa13.54□□□□□ -0.24
CYB561A3-213ENST00000539890 ARPP19P56211 112 aa13.54□□□□□ -0.24
CYB561A3-213ENST00000539890 RBP5P82980 135 aa13.54□□□□□ -0.24
CYB561A3-213ENST00000539890 MYO1EQ12965 1108 aa13.54□□□□□ -0.24
CYB561A3-213ENST00000539890 MYBPC2Q14324 1141 aa13.54□□□□□ -0.24
CYB561A3-213ENST00000539890 CTC1Q2NKJ3 1217 aa13.54□□□□□ -0.24
CYB561A3-213ENST00000539890 LEXMQ3ZCV2 418 aa13.54□□□□□ -0.24
CYB561A3-213ENST00000539890 SV2CQ496J9 727 aa13.54□□□□□ -0.24
CYB561A3-213ENST00000539890 TJAP1Q5JTD0 557 aa13.54□□□□□ -0.24
CYB561A3-213ENST00000539890 RTP2Q5QGT7 225 aa13.54□□□□□ -0.24
CYB561A3-213ENST00000539890 C9orf57Q5W0N0 161 aa13.54□□□□□ -0.24
CYB561A3-213ENST00000539890 PTCRAQ6ISU1 281 aaPredicted RBP13.54□□□□□ -0.24
CYB561A3-213ENST00000539890 PRSS55Q6UWB4 352 aaPredicted RBP13.54□□□□□ -0.24
CYB561A3-213ENST00000539890 C12orf56Q8IXR9 622 aa13.54□□□□□ -0.24
CYB561A3-213ENST00000539890 ZSWIM2Q8NEG5 633 aa13.54□□□□□ -0.24
CYB561A3-213ENST00000539890 PIK3R5Q8WYR1 880 aa13.54□□□□□ -0.24
CYB561A3-213ENST00000539890 RXFP1Q9HBX9 757 aa13.54□□□□□ -0.24
CYB561A3-213ENST00000539890 DZANK1Q9NVP4 752 aa13.54□□□□□ -0.24
CYB561A3-213ENST00000539890 FNIP2Q9P278 1114 aa13.54□□□□□ -0.24
CYB561A3-213ENST00000539890 ITGA11Q9UKX5 1188 aa13.54□□□□□ -0.24
CYB561A3-213ENST00000539890 BARX2Q9UMQ3 279 aaPredicted RBP13.54□□□□□ -0.24
CYB561A3-213ENST00000539890 AGAP1Q9UPQ3 857 aa13.54□□□□□ -0.24
CYB561A3-213ENST00000539890 HCFC2Q9Y5Z7 792 aa13.54□□□□□ -0.24
CYB561A3-213ENST00000539890 CDH23Q9H251 3354 aa13.54□□□□□ -0.24
CYB561A3-213ENST00000539890 BIN1O00499 593 aa13.53□□□□□ -0.24
CYB561A3-213ENST00000539890 CETN3O15182 167 aa13.53□□□□□ -0.24
CYB561A3-213ENST00000539890 ITGB3P05106 788 aa13.53□□□□□ -0.24
CYB561A3-213ENST00000539890 ODC1P11926 461 aa13.53□□□□□ -0.24
CYB561A3-213ENST00000539890 RPL17P18621 184 aaKnown RBP13.53□□□□□ -0.24
CYB561A3-213ENST00000539890 ELF1P32519 619 aa13.53□□□□□ -0.24
CYB561A3-213ENST00000539890 LILRA4P59901 499 aa13.53□□□□□ -0.24
CYB561A3-213ENST00000539890 CYP24A1Q07973 514 aa13.53□□□□□ -0.24
CYB561A3-213ENST00000539890 ADAM9Q13443 819 aa13.53□□□□□ -0.24
CYB561A3-213ENST00000539890 TRPC3Q13507 836 aa13.53□□□□□ -0.24
CYB561A3-213ENST00000539890 CTXN3Q4LDR2 81 aa13.53□□□□□ -0.24
CYB561A3-213ENST00000539890 ANKRD54Q6NXT1 300 aa13.53□□□□□ -0.24
CYB561A3-213ENST00000539890 CLEC17AQ6ZS10 378 aa13.53□□□□□ -0.24
CYB561A3-213ENST00000539890 WDR49Q8IV35 697 aa13.53□□□□□ -0.24
CYB561A3-213ENST00000539890 SLC9A9Q8IVB4 645 aa13.53□□□□□ -0.24
CYB561A3-213ENST00000539890 SMYD4Q8IYR2 804 aaPredicted RBP13.53□□□□□ -0.24
CYB561A3-213ENST00000539890 RNF168Q8IYW5 571 aaPredicted RBP13.53□□□□□ -0.24
CYB561A3-213ENST00000539890 THEM5Q8N1Q8 247 aa13.53□□□□□ -0.24
CYB561A3-213ENST00000539890 C3orf58Q8NDZ4 430 aa13.53□□□□□ -0.24
CYB561A3-213ENST00000539890 LNX1Q8TBB1 728 aaPredicted RBP13.53□□□□□ -0.24
CYB561A3-213ENST00000539890 SUSD3Q96L08 255 aa13.53□□□□□ -0.24
CYB561A3-213ENST00000539890 KCTD10Q9H3F6 313 aa13.53□□□□□ -0.24
CYB561A3-213ENST00000539890 DSEQ9UL01 958 aa13.53□□□□□ -0.24
CYB561A3-213ENST00000539890 PCDHB8Q9UN66 801 aa13.53□□□□□ -0.24
CYB561A3-213ENST00000539890 TRAF3IP3Q9Y228 551 aa13.53□□□□□ -0.24
CYB561A3-213ENST00000539890 PIRO00625 290 aa13.52□□□□□ -0.25
CYB561A3-213ENST00000539890 CYB561D2O14569 222 aa13.52□□□□□ -0.25
CYB561A3-213ENST00000539890 HUS1O60921 280 aa13.52□□□□□ -0.25
CYB561A3-213ENST00000539890 LILRB3O75022 631 aa13.52□□□□□ -0.25
CYB561A3-213ENST00000539890 SPATA31D3P0C874 917 aa13.52□□□□□ -0.25
CYB561A3-213ENST00000539890 EPCAMP16422 314 aa13.52□□□□□ -0.25
CYB561A3-213ENST00000539890 POLR2BP30876 1174 aaKnown RBP13.52□□□□□ -0.25
CYB561A3-213ENST00000539890 OR1D2P34982 312 aa13.52□□□□□ -0.25
CYB561A3-213ENST00000539890 PSMC2P35998 433 aaKnown RBP13.52□□□□□ -0.25
CYB561A3-213ENST00000539890 PRCPP42785 496 aa13.52□□□□□ -0.25
CYB561A3-213ENST00000539890 CLCN4P51793 760 aa13.52□□□□□ -0.25
CYB561A3-213ENST00000539890 AP3M2P53677 418 aa13.52□□□□□ -0.25
CYB561A3-213ENST00000539890 YWHAHQ04917 246 aaPredicted RBP13.52□□□□□ -0.25
CYB561A3-213ENST00000539890 DLX2Q07687 328 aaPredicted RBP13.52□□□□□ -0.25
CYB561A3-213ENST00000539890 BFSP1Q12934 665 aa13.52□□□□□ -0.25
CYB561A3-213ENST00000539890 BIRC3Q13489 604 aa13.52□□□□□ -0.25
CYB561A3-213ENST00000539890 PSMD6Q15008 389 aa13.52□□□□□ -0.25
CYB561A3-213ENST00000539890 VARS2Q5ST30 1063 aaKnown RBP13.52□□□□□ -0.25
CYB561A3-213ENST00000539890 LIN9Q5TKA1 542 aa13.52□□□□□ -0.25
CYB561A3-213ENST00000539890 LMBRD2Q68DH5 695 aaPredicted RBP13.52□□□□□ -0.25
CYB561A3-213ENST00000539890 ZNF280DQ6N043 979 aa13.52□□□□□ -0.25
CYB561A3-213ENST00000539890 TMEM184AQ6ZMB5 413 aa13.52□□□□□ -0.25
CYB561A3-213ENST00000539890 SPATA31D4Q6ZUB0 917 aa13.52□□□□□ -0.25
CYB561A3-213ENST00000539890 EFCAB13Q8IY85 973 aa13.52□□□□□ -0.25
CYB561A3-213ENST00000539890 FBXL18Q96ME1 805 aa13.52□□□□□ -0.25
CYB561A3-213ENST00000539890 APOL5Q9BWW9 433 aa13.52□□□□□ -0.25
CYB561A3-213ENST00000539890 OXCT2Q9BYC2 517 aaPredicted RBP13.52□□□□□ -0.25
CYB561A3-213ENST00000539890 MTMR12Q9C0I1 747 aa13.52□□□□□ -0.25
CYB561A3-213ENST00000539890 INTS13Q9NVM9 706 aa13.52□□□□□ -0.25
CYB561A3-213ENST00000539890 MAN1B1Q9UKM7 699 aa13.52□□□□□ -0.25
CYB561A3-213ENST00000539890 CDY1Q9Y6F8 540 aa13.52□□□□□ -0.25
CYB561A3-213ENST00000539890 PLXNA4Q9HCM2 1894 aa13.52□□□□□ -0.25
CYB561A3-213ENST00000539890 BICDL2A1A5D9 508 aa13.51□□□□□ -0.25
CYB561A3-213ENST00000539890 KPNA7A9QM74 516 aa13.51□□□□□ -0.25
CYB561A3-213ENST00000539890 TBX10O75333 385 aa13.51□□□□□ -0.25
CYB561A3-213ENST00000539890 EFEMP2O95967 443 aa13.51□□□□□ -0.25
CYB561A3-213ENST00000539890 EPB41P11171 864 aaKnown RBP13.51□□□□□ -0.25
CYB561A3-213ENST00000539890 LTBRP36941 435 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms