RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 ADRB1P08588 477 aa15.35■□□□□ 0.05
SMARCA4-206ENST00000538456 KCNA4P22459 653 aa15.35■□□□□ 0.05
SMARCA4-206ENST00000538456 CCNE1P24864 410 aa15.35■□□□□ 0.05
SMARCA4-206ENST00000538456 GRM5P41594 1212 aa15.35■□□□□ 0.05
SMARCA4-206ENST00000538456 GUCY1B3Q02153 619 aa15.35■□□□□ 0.05
SMARCA4-206ENST00000538456 DMWDQ09019 674 aa15.35■□□□□ 0.05
SMARCA4-206ENST00000538456 TWF1Q12792 350 aa15.35■□□□□ 0.05
SMARCA4-206ENST00000538456 SRSF5Q13243 272 aaKnown RBP15.35■□□□□ 0.05
SMARCA4-206ENST00000538456 PPM1JQ5JR12 505 aa15.35■□□□□ 0.05
SMARCA4-206ENST00000538456 CELF5Q8N6W0 485 aaKnown RBP15.35■□□□□ 0.05
SMARCA4-206ENST00000538456 NSUN7Q8NE18 718 aaKnown RBP15.35■□□□□ 0.05
SMARCA4-206ENST00000538456 ZSCAN18Q8TBC5 510 aaPredicted RBP15.35■□□□□ 0.05
SMARCA4-206ENST00000538456 KIFAP3Q92845 792 aa15.35■□□□□ 0.05
SMARCA4-206ENST00000538456 C18orf25Q96B23 403 aaPredicted RBP15.35■□□□□ 0.05
SMARCA4-206ENST00000538456 IER2Q9BTL4 223 aa15.35■□□□□ 0.05
SMARCA4-206ENST00000538456 BHMT2Q9H2M3 363 aa15.35■□□□□ 0.05
SMARCA4-206ENST00000538456 SLITRK6Q9H5Y7 841 aa15.35■□□□□ 0.05
SMARCA4-206ENST00000538456 CEP72Q9P209 647 aa15.35■□□□□ 0.05
SMARCA4-206ENST00000538456 TNFSF13BQ9Y275 285 aa15.35■□□□□ 0.05
SMARCA4-206ENST00000538456 CFAP47Q6ZTR5 3102 aa15.34■□□□□ 0.05
SMARCA4-206ENST00000538456 USP24Q9UPU5 2620 aa15.34■□□□□ 0.05
SMARCA4-206ENST00000538456 ZNF263O14978 683 aa15.34■□□□□ 0.05
SMARCA4-206ENST00000538456 SYN3O14994 580 aa15.34■□□□□ 0.05
SMARCA4-206ENST00000538456 MICAL2O94851 1124 aa15.34■□□□□ 0.05
SMARCA4-206ENST00000538456 OR52Z1P0C646 297 aa15.34■□□□□ 0.05
SMARCA4-206ENST00000538456 HARSP12081 509 aaKnown RBP15.34■□□□□ 0.05
SMARCA4-206ENST00000538456 CPB1P15086 417 aa15.34■□□□□ 0.05
SMARCA4-206ENST00000538456 MCM4P33991 863 aa15.34■□□□□ 0.05
SMARCA4-206ENST00000538456 CCT6AP40227 531 aaKnown RBP15.34■□□□□ 0.05
SMARCA4-206ENST00000538456 CXCL12P48061 93 aa15.34■□□□□ 0.05
SMARCA4-206ENST00000538456 SIM2Q14190 667 aaPredicted RBP15.34■□□□□ 0.05
SMARCA4-206ENST00000538456 TEAD2Q15562 447 aa15.34■□□□□ 0.05
SMARCA4-206ENST00000538456 ZNF174Q15697 407 aa15.34■□□□□ 0.05
SMARCA4-206ENST00000538456 ECM1Q16610 540 aa15.34■□□□□ 0.05
SMARCA4-206ENST00000538456 ST3GAL2Q16842 350 aa15.34■□□□□ 0.05
SMARCA4-206ENST00000538456 TPGS2Q68CL5 300 aa15.34■□□□□ 0.05
SMARCA4-206ENST00000538456 ALKAL1Q6UXT8 129 aa15.34■□□□□ 0.05
SMARCA4-206ENST00000538456 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.34■□□□□ 0.05
SMARCA4-206ENST00000538456 NETO1Q8TDF5 533 aa15.34■□□□□ 0.05
SMARCA4-206ENST00000538456 DEPDC1BQ8WUY9 529 aa15.34■□□□□ 0.05
SMARCA4-206ENST00000538456 ZNF512Q96ME7 567 aaPredicted RBP15.34■□□□□ 0.05
SMARCA4-206ENST00000538456 ACO2Q99798 780 aaKnown RBP15.34■□□□□ 0.05
SMARCA4-206ENST00000538456 ASAH2Q9NR71 780 aa15.34■□□□□ 0.05
SMARCA4-206ENST00000538456 RBM12Q9NTZ6 932 aaKnown RBP15.34■□□□□ 0.05
SMARCA4-206ENST00000538456 PHLPP2Q6ZVD8 1323 aa15.34■□□□□ 0.05
SMARCA4-206ENST00000538456 CNOT1A5YKK6 2376 aaKnown RBP15.34■□□□□ 0.05
SMARCA4-206ENST00000538456 SLC38A8A6NNN8 435 aa15.33■□□□□ 0.04
SMARCA4-206ENST00000538456 CHURC1-FNTBB4DL54 471 aa15.33■□□□□ 0.04
SMARCA4-206ENST00000538456 MOSPD3O75425 235 aa15.33■□□□□ 0.04
SMARCA4-206ENST00000538456 RETP07949 1114 aa15.33■□□□□ 0.04
SMARCA4-206ENST00000538456 CHRNB1P11230 501 aa15.33■□□□□ 0.04
SMARCA4-206ENST00000538456 SOX9P48436 509 aa15.33■□□□□ 0.04
SMARCA4-206ENST00000538456 FNTBP49356 437 aa15.33■□□□□ 0.04
SMARCA4-206ENST00000538456 PEX3P56589 373 aa15.33■□□□□ 0.04
SMARCA4-206ENST00000538456 MRPL58Q14197 206 aaKnown RBP15.33■□□□□ 0.04
SMARCA4-206ENST00000538456 GAS6Q14393 721 aa15.33■□□□□ 0.04
SMARCA4-206ENST00000538456 XKR4Q5GH76 650 aa15.33■□□□□ 0.04
SMARCA4-206ENST00000538456 HAUS3Q68CZ6 603 aa15.33■□□□□ 0.04
SMARCA4-206ENST00000538456 HEATR6Q6AI08 1181 aaKnown RBP15.33■□□□□ 0.04
SMARCA4-206ENST00000538456 ZNF280DQ6N043 979 aa15.33■□□□□ 0.04
SMARCA4-206ENST00000538456 MAMSTRQ6ZN01 415 aa15.33■□□□□ 0.04
SMARCA4-206ENST00000538456 TCHPQ9BT92 498 aa15.33■□□□□ 0.04
SMARCA4-206ENST00000538456 TARS2Q9BW92 718 aaKnown RBP15.33■□□□□ 0.04
SMARCA4-206ENST00000538456 TRPV5Q9NQA5 729 aa15.33■□□□□ 0.04
SMARCA4-206ENST00000538456 SEMA4GQ9NTN9 838 aa15.33■□□□□ 0.04
SMARCA4-206ENST00000538456 SDK1Q7Z5N4 2213 aa15.33■□□□□ 0.04
SMARCA4-206ENST00000538456 KIF26AQ9ULI4 1882 aaPredicted RBP15.32■□□□□ 0.04
SMARCA4-206ENST00000538456 HEPACAM2A8MVW5 462 aa15.32■□□□□ 0.04
SMARCA4-206ENST00000538456 SLC30A4O14863 429 aa15.32■□□□□ 0.04
SMARCA4-206ENST00000538456 HRO43593 1189 aa15.32■□□□□ 0.04
SMARCA4-206ENST00000538456 GDF9O60383 454 aa15.32■□□□□ 0.04
SMARCA4-206ENST00000538456 NPTX2P47972 431 aa15.32■□□□□ 0.04
SMARCA4-206ENST00000538456 KPNA1P52294 538 aaPredicted RBP15.32■□□□□ 0.04
SMARCA4-206ENST00000538456 SAFBQ15424 915 aaKnown RBP eCLIP15.32■□□□□ 0.04
SMARCA4-206ENST00000538456 RNF19BQ6ZMZ0 732 aa15.32■□□□□ 0.04
SMARCA4-206ENST00000538456 PRR23CQ6ZRP0 262 aa15.32■□□□□ 0.04
SMARCA4-206ENST00000538456 Q6ZS52 159 aa15.32■□□□□ 0.04
SMARCA4-206ENST00000538456 GPIHBP1Q8IV16 184 aa15.32■□□□□ 0.04
SMARCA4-206ENST00000538456 MFSD6LQ8IWD5 586 aa15.32■□□□□ 0.04
SMARCA4-206ENST00000538456 YAF2Q8IY57 180 aa15.32■□□□□ 0.04
SMARCA4-206ENST00000538456 TMEM130Q8N3G9 435 aa15.32■□□□□ 0.04
SMARCA4-206ENST00000538456 SHKBP1Q8TBC3 707 aa15.32■□□□□ 0.04
SMARCA4-206ENST00000538456 CSGALNACT1Q8TDX6 532 aa15.32■□□□□ 0.04
SMARCA4-206ENST00000538456 RSPRY1Q96DX4 576 aa15.32■□□□□ 0.04
SMARCA4-206ENST00000538456 SUSD3Q96L08 255 aa15.32■□□□□ 0.04
SMARCA4-206ENST00000538456 TBC1D32Q96NH3 1257 aa15.32■□□□□ 0.04
SMARCA4-206ENST00000538456 ACAP3Q96P50 834 aa15.32■□□□□ 0.04
SMARCA4-206ENST00000538456 MRPL4Q9BYD3 311 aaKnown RBP15.32■□□□□ 0.04
SMARCA4-206ENST00000538456 PTPRHQ9HD43 1115 aa15.32■□□□□ 0.04
SMARCA4-206ENST00000538456 CNTN3Q9P232 1028 aa15.32■□□□□ 0.04
SMARCA4-206ENST00000538456 AFF4Q9UHB7 1163 aaKnown RBP15.32■□□□□ 0.04
SMARCA4-206ENST00000538456 KIAA1024Q9UPX6 916 aa15.32■□□□□ 0.04
SMARCA4-206ENST00000538456 ARNTLO00327 626 aa15.31■□□□□ 0.04
SMARCA4-206ENST00000538456 MEFVO15553 781 aaPredicted RBP15.31■□□□□ 0.04
SMARCA4-206ENST00000538456 LRP3O75074 770 aa15.31■□□□□ 0.04
SMARCA4-206ENST00000538456 MCF2P10911 925 aa15.31■□□□□ 0.04
SMARCA4-206ENST00000538456 KCNE1P15382 129 aa15.31■□□□□ 0.04
SMARCA4-206ENST00000538456 RPL9P32969 192 aaKnown RBP15.31■□□□□ 0.04
SMARCA4-206ENST00000538456 DMP1Q13316 513 aaPredicted RBP15.31■□□□□ 0.04
SMARCA4-206ENST00000538456 SEZ6Q53EL9 994 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms