RNA–Protein interactions for RNA: ENST00000536079.5

DDX55-204, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 765 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-204ENST00000536079 MTMR12Q9C0I1 747 aa19.36■□□□□ 0.69
DDX55-204ENST00000536079 KIAA1586Q9HCI6 787 aa19.36■□□□□ 0.69
DDX55-204ENST00000536079 MRPL17Q9NRX2 175 aaKnown RBP19.36■□□□□ 0.69
DDX55-204ENST00000536079 CLDND1Q9NY35 253 aa19.36■□□□□ 0.69
DDX55-204ENST00000536079 CLEC1BQ9P126 229 aa19.36■□□□□ 0.69
DDX55-204ENST00000536079 KIAA1468Q9P260 1216 aa19.36■□□□□ 0.69
DDX55-204ENST00000536079 SIX4Q9UIU6 781 aa19.36■□□□□ 0.69
DDX55-204ENST00000536079 TRIM49BA6NDI0 452 aa19.35■□□□□ 0.69
DDX55-204ENST00000536079 TEX28O15482 410 aa19.35■□□□□ 0.69
DDX55-204ENST00000536079 CALUO43852 315 aaPredicted RBP19.35■□□□□ 0.69
DDX55-204ENST00000536079 URODP06132 367 aa19.35■□□□□ 0.69
DDX55-204ENST00000536079 AARSP49588 968 aaKnown RBP eCLIP19.35■□□□□ 0.69
DDX55-204ENST00000536079 DLG4P78352 724 aa19.35■□□□□ 0.69
DDX55-204ENST00000536079 PSMD6Q15008 389 aa19.35■□□□□ 0.69
DDX55-204ENST00000536079 ANKRD40Q6AI12 368 aa19.35■□□□□ 0.69
DDX55-204ENST00000536079 CENPPQ6IPU0 288 aa19.35■□□□□ 0.69
DDX55-204ENST00000536079 EP400NLQ6ZTU2 488 aa19.35■□□□□ 0.69
DDX55-204ENST00000536079 EFHBQ8N7U6 833 aa19.35■□□□□ 0.69
DDX55-204ENST00000536079 SLC22A17Q8WUG5 538 aa19.35■□□□□ 0.69
DDX55-204ENST00000536079 HLA-CQ95604 372 aa19.35■□□□□ 0.69
DDX55-204ENST00000536079 PABPC5Q96DU9 382 aaKnown RBP19.35■□□□□ 0.69
DDX55-204ENST00000536079 TTPALQ9BTX7 342 aa19.35■□□□□ 0.69
DDX55-204ENST00000536079 UBE2ZQ9H832 354 aaPredicted RBP19.35■□□□□ 0.69
DDX55-204ENST00000536079 RXFP1Q9HBX9 757 aa19.35■□□□□ 0.69
DDX55-204ENST00000536079 BARX2Q9UMQ3 279 aaPredicted RBP19.35■□□□□ 0.69
DDX55-204ENST00000536079 UNC80Q8N2C7 3258 aa19.35■□□□□ 0.69
DDX55-204ENST00000536079 VWA8A3KMH1 1905 aa19.34■□□□□ 0.69
DDX55-204ENST00000536079 H3BQ06 376 aaPredicted RBP19.34■□□□□ 0.69
DDX55-204ENST00000536079 XPOTO43592 962 aaKnown RBP19.34■□□□□ 0.69
DDX55-204ENST00000536079 AKAP3O75969 853 aa19.34■□□□□ 0.69
DDX55-204ENST00000536079 KIF20AO95235 890 aa19.34■□□□□ 0.69
DDX55-204ENST00000536079 DLATP10515 647 aaKnown RBP19.34■□□□□ 0.69
DDX55-204ENST00000536079 EPCAMP16422 314 aa19.34■□□□□ 0.69
DDX55-204ENST00000536079 MCM4P33991 863 aa19.34■□□□□ 0.69
DDX55-204ENST00000536079 LILRA4P59901 499 aa19.34■□□□□ 0.69
DDX55-204ENST00000536079 NFIL3Q16649 462 aa19.34■□□□□ 0.69
DDX55-204ENST00000536079 C1orf220Q5T0J3 134 aa19.34■□□□□ 0.69
DDX55-204ENST00000536079 CEP135Q66GS9 1140 aa19.34■□□□□ 0.69
DDX55-204ENST00000536079 KIAA1841Q6NSI8 718 aa19.34■□□□□ 0.69
DDX55-204ENST00000536079 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.34■□□□□ 0.69
DDX55-204ENST00000536079 GLYCTKQ8IVS8 523 aa19.34■□□□□ 0.69
DDX55-204ENST00000536079 BORCS6Q96GS4 357 aa19.34■□□□□ 0.69
DDX55-204ENST00000536079 SUSD3Q96L08 255 aa19.34■□□□□ 0.69
DDX55-204ENST00000536079 INTS13Q9NVM9 706 aa19.34■□□□□ 0.69
DDX55-204ENST00000536079 STK39Q9UEW8 545 aa19.34■□□□□ 0.69
DDX55-204ENST00000536079 NUB1Q9Y5A7 615 aa19.34■□□□□ 0.69
DDX55-204ENST00000536079 TIMM13Q9Y5L4 95 aaPredicted RBP19.34■□□□□ 0.69
DDX55-204ENST00000536079 ITGB3P05106 788 aa19.33■□□□□ 0.68
DDX55-204ENST00000536079 KCNA5P22460 613 aa19.33■□□□□ 0.68
DDX55-204ENST00000536079 NR2F2P24468 414 aa19.33■□□□□ 0.68
DDX55-204ENST00000536079 POLR2BP30876 1174 aaKnown RBP19.33■□□□□ 0.68
DDX55-204ENST00000536079 MYBPC2Q14324 1141 aa19.33■□□□□ 0.68
DDX55-204ENST00000536079 NT5DC4Q86YG4 428 aa19.33■□□□□ 0.68
DDX55-204ENST00000536079 PIK3R5Q8WYR1 880 aa19.33■□□□□ 0.68
DDX55-204ENST00000536079 CGRRF1Q99675 332 aa19.33■□□□□ 0.68
DDX55-204ENST00000536079 CLSTN3Q9BQT9 956 aa19.33■□□□□ 0.68
DDX55-204ENST00000536079 AGAP1Q9UPQ3 857 aa19.33■□□□□ 0.68
DDX55-204ENST00000536079 HCFC2Q9Y5Z7 792 aa19.33■□□□□ 0.68
DDX55-204ENST00000536079 LRRIQ3A6PVS8 624 aaPredicted RBP19.32■□□□□ 0.68
DDX55-204ENST00000536079 M0QZQ0 153 aa19.32■□□□□ 0.68
DDX55-204ENST00000536079 CLCN4P51793 760 aa19.32■□□□□ 0.68
DDX55-204ENST00000536079 ELAVL2Q12926 359 aaKnown RBP19.32■□□□□ 0.68
DDX55-204ENST00000536079 ADAM9Q13443 819 aa19.32■□□□□ 0.68
DDX55-204ENST00000536079 MRPL58Q14197 206 aaKnown RBP19.32■□□□□ 0.68
DDX55-204ENST00000536079 CLUL1Q15846 466 aa19.32■□□□□ 0.68
DDX55-204ENST00000536079 PSMD5Q16401 504 aa19.32■□□□□ 0.68
DDX55-204ENST00000536079 KLHL10Q6JEL2 608 aa19.32■□□□□ 0.68
DDX55-204ENST00000536079 CSGALNACT2Q8N6G5 542 aa19.32■□□□□ 0.68
DDX55-204ENST00000536079 PARD3BQ8TEW8 1205 aa19.32■□□□□ 0.68
DDX55-204ENST00000536079 MSLNLQ96KJ4 702 aa19.32■□□□□ 0.68
DDX55-204ENST00000536079 CDCA3Q99618 268 aaPredicted RBP19.32■□□□□ 0.68
DDX55-204ENST00000536079 DUSP9Q99956 384 aaKnown RBP19.32■□□□□ 0.68
DDX55-204ENST00000536079 THEGQ9P2T0 379 aa19.32■□□□□ 0.68
DDX55-204ENST00000536079 TBC1D4O60343 1298 aa19.31■□□□□ 0.68
DDX55-204ENST00000536079 CST3P01034 146 aaPredicted RBP19.31■□□□□ 0.68
DDX55-204ENST00000536079 SPATA31D3P0C874 917 aa19.31■□□□□ 0.68
DDX55-204ENST00000536079 KLRC2P26717 231 aa19.31■□□□□ 0.68
DDX55-204ENST00000536079 KCNQ1P51787 676 aa19.31■□□□□ 0.68
DDX55-204ENST00000536079 BMS1Q14692 1282 aaKnown RBP19.31■□□□□ 0.68
DDX55-204ENST00000536079 EDRF1Q3B7T1 1238 aa19.31■□□□□ 0.68
DDX55-204ENST00000536079 VARS2Q5ST30 1063 aaKnown RBP19.31■□□□□ 0.68
DDX55-204ENST00000536079 TMEM184AQ6ZMB5 413 aa19.31■□□□□ 0.68
DDX55-204ENST00000536079 SPATA31D4Q6ZUB0 917 aa19.31■□□□□ 0.68
DDX55-204ENST00000536079 PALB2Q86YC2 1186 aa19.31■□□□□ 0.68
DDX55-204ENST00000536079 WDR49Q8IV35 697 aa19.31■□□□□ 0.68
DDX55-204ENST00000536079 ZC3H3Q8IXZ2 948 aaKnown RBP19.31■□□□□ 0.68
DDX55-204ENST00000536079 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.31■□□□□ 0.68
DDX55-204ENST00000536079 CACTINQ8WUQ7 758 aaKnown RBP19.31■□□□□ 0.68
DDX55-204ENST00000536079 PPP2R3CQ969Q6 453 aa19.31■□□□□ 0.68
DDX55-204ENST00000536079 SENP8Q96LD8 212 aa19.31■□□□□ 0.68
DDX55-204ENST00000536079 MED15Q96RN5 788 aa19.31■□□□□ 0.68
DDX55-204ENST00000536079 EMILIN2Q9BXX0 1053 aa19.31■□□□□ 0.68
DDX55-204ENST00000536079 NUP62CLQ9H1M0 184 aa19.31■□□□□ 0.68
DDX55-204ENST00000536079 FNIP2Q9P278 1114 aa19.31■□□□□ 0.68
DDX55-204ENST00000536079 PCDHB8Q9UN66 801 aa19.31■□□□□ 0.68
DDX55-204ENST00000536079 COG5Q9UP83 839 aa19.31■□□□□ 0.68
DDX55-204ENST00000536079 CTNND2Q9UQB3 1225 aa19.31■□□□□ 0.68
DDX55-204ENST00000536079 SCN1AP35498 2009 aa19.3■□□□□ 0.68
DDX55-204ENST00000536079 BRWD1Q9NSI6 2320 aa19.3■□□□□ 0.68
DDX55-204ENST00000536079 TRAPPC3O43617 180 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms