RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 EBF3Q9H4W6 596 aa1.3□□□□□ -2.2
COPB1-212ENST00000534771 GSTO2Q9H4Y5 243 aa1.3□□□□□ -2.2
COPB1-212ENST00000534771 BCO1Q9HAY6 547 aa1.3□□□□□ -2.2
COPB1-212ENST00000534771 INTS13Q9NVM9 706 aa1.3□□□□□ -2.2
COPB1-212ENST00000534771 FBXO34Q9NWN3 711 aa1.3□□□□□ -2.2
COPB1-212ENST00000534771 THG1LQ9NWX6 298 aaKnown RBP1.3□□□□□ -2.2
COPB1-212ENST00000534771 MTMR4Q9NYA4 1195 aa1.3□□□□□ -2.2
COPB1-212ENST00000534771 PPP2R3BQ9Y5P8 575 aa1.3□□□□□ -2.2
COPB1-212ENST00000534771 PTCH2Q9Y6C5 1203 aa1.3□□□□□ -2.2
COPB1-212ENST00000534771 CDY2AQ9Y6F7 541 aa1.3□□□□□ -2.2
COPB1-212ENST00000534771 PRAMEF33A0A0G2JMD5 474 aa1.29□□□□□ -2.2
COPB1-212ENST00000534771 LINC00473A8K010 186 aa1.29□□□□□ -2.2
COPB1-212ENST00000534771 GSG1L2A8MUP6 293 aa1.29□□□□□ -2.2
COPB1-212ENST00000534771 PRAMEF10O60809 474 aa1.29□□□□□ -2.2
COPB1-212ENST00000534771 TOP3BO95985 862 aaKnown RBP1.29□□□□□ -2.2
COPB1-212ENST00000534771 TUBB4AP04350 444 aa1.29□□□□□ -2.2
COPB1-212ENST00000534771 LPLP06858 475 aa1.29□□□□□ -2.2
COPB1-212ENST00000534771 HNRNPCP07910 306 aaKnown RBP eCLIP1.29□□□□□ -2.2
COPB1-212ENST00000534771 CHRM2P08172 466 aa1.29□□□□□ -2.2
COPB1-212ENST00000534771 FAM163BP0C2L3 166 aa1.29□□□□□ -2.2
COPB1-212ENST00000534771 GSPT1P15170 499 aaKnown RBP1.29□□□□□ -2.2
COPB1-212ENST00000534771 SDSP20132 328 aa1.29□□□□□ -2.2
COPB1-212ENST00000534771 WASP42768 502 aa1.29□□□□□ -2.2
COPB1-212ENST00000534771 NEK4P51957 841 aa1.29□□□□□ -2.2
COPB1-212ENST00000534771 LGALS4P56470 323 aa1.29□□□□□ -2.2
COPB1-212ENST00000534771 NXPH1P58417 271 aa1.29□□□□□ -2.2
COPB1-212ENST00000534771 NOMO3P69849 1222 aa1.29□□□□□ -2.2
COPB1-212ENST00000534771 OCRLQ01968 901 aa1.29□□□□□ -2.2
COPB1-212ENST00000534771 DSG1Q02413 1049 aa1.29□□□□□ -2.2
COPB1-212ENST00000534771 RBL2Q08999 1139 aa1.29□□□□□ -2.2
COPB1-212ENST00000534771 NOMO1Q15155 1222 aa1.29□□□□□ -2.2
COPB1-212ENST00000534771 TERF2Q15554 542 aa1.29□□□□□ -2.2
COPB1-212ENST00000534771 MST1LQ2TV78 715 aa1.29□□□□□ -2.2
COPB1-212ENST00000534771 C2orf27AQ580R0 203 aa1.29□□□□□ -2.2
COPB1-212ENST00000534771 NOMO2Q5JPE7 1267 aa1.29□□□□□ -2.2
COPB1-212ENST00000534771 CEP78Q5JTW2 689 aa1.29□□□□□ -2.2
COPB1-212ENST00000534771 DGKKQ5KSL6 1271 aa1.29□□□□□ -2.2
COPB1-212ENST00000534771 KIAA1161Q6NSJ0 714 aa1.29□□□□□ -2.2
COPB1-212ENST00000534771 ZNF529Q6P280 563 aa1.29□□□□□ -2.2
COPB1-212ENST00000534771 Q6ZVL8 140 aa1.29□□□□□ -2.2
COPB1-212ENST00000534771 UBE3BQ7Z3V4 1068 aa1.29□□□□□ -2.2
COPB1-212ENST00000534771 CLNKQ7Z7G1 428 aa1.29□□□□□ -2.2
COPB1-212ENST00000534771 KRT73Q86Y46 540 aa1.29□□□□□ -2.2
COPB1-212ENST00000534771 TRMT2AQ8IZ69 625 aaKnown RBP1.29□□□□□ -2.2
COPB1-212ENST00000534771 PQLC1Q8N2U9 271 aa1.29□□□□□ -2.2
COPB1-212ENST00000534771 FBXO18Q8NFZ0 1043 aa1.29□□□□□ -2.2
COPB1-212ENST00000534771 NSMCE1Q8WV22 266 aa1.29□□□□□ -2.2
COPB1-212ENST00000534771 CASKIN2Q8WXE0 1202 aa1.29□□□□□ -2.2
COPB1-212ENST00000534771 LPIN2Q92539 896 aa1.29□□□□□ -2.2
COPB1-212ENST00000534771 MKL1Q969V6 931 aa1.29□□□□□ -2.2
COPB1-212ENST00000534771 SH2D3AQ9BRG2 576 aa1.29□□□□□ -2.2
COPB1-212ENST00000534771 SPRTNQ9H040 489 aaPredicted RBP1.29□□□□□ -2.2
COPB1-212ENST00000534771 VPS16Q9H269 839 aa1.29□□□□□ -2.2
COPB1-212ENST00000534771 KLC4Q9NSK0 619 aa1.29□□□□□ -2.2
COPB1-212ENST00000534771 TMEM140Q9NV12 185 aa1.29□□□□□ -2.2
COPB1-212ENST00000534771 TUBA8Q9NY65 449 aaPredicted RBP1.29□□□□□ -2.2
COPB1-212ENST00000534771 SNTG2Q9NY99 539 aa1.29□□□□□ -2.2
COPB1-212ENST00000534771 HSFX1Q9UBD0 423 aa1.29□□□□□ -2.2
COPB1-212ENST00000534771 SIK3Q9Y2K2 1263 aa1.29□□□□□ -2.2
COPB1-212ENST00000534771 NEU2Q9Y3R4 380 aa1.29□□□□□ -2.2
COPB1-212ENST00000534771 NOC2LQ9Y3T9 749 aaKnown RBP1.29□□□□□ -2.2
COPB1-212ENST00000534771 PCDHB1Q9Y5F3 818 aa1.29□□□□□ -2.2
COPB1-212ENST00000534771 A0A1W2PS29 197 aa1.28□□□□□ -2.2
COPB1-212ENST00000534771 FAM83GA6ND36 823 aa1.28□□□□□ -2.2
COPB1-212ENST00000534771 ZNF891A8MT65 544 aaPredicted RBP1.28□□□□□ -2.2
COPB1-212ENST00000534771 WNT10BO00744 389 aa1.28□□□□□ -2.2
COPB1-212ENST00000534771 TEX33O43247 280 aa1.28□□□□□ -2.2
COPB1-212ENST00000534771 RFPL3O75679 317 aa1.28□□□□□ -2.2
COPB1-212ENST00000534771 JTBO76095 146 aa1.28□□□□□ -2.2
COPB1-212ENST00000534771 ALAS1P13196 640 aa1.28□□□□□ -2.2
COPB1-212ENST00000534771 ECHS1P30084 290 aa1.28□□□□□ -2.2
COPB1-212ENST00000534771 GTF2F1P35269 517 aaKnown RBP eCLIP1.28□□□□□ -2.23e-9■■■■■ 105.7
COPB1-212ENST00000534771 MCAMP43121 646 aa1.28□□□□□ -2.2
COPB1-212ENST00000534771 ALDH1A3P47895 512 aa1.28□□□□□ -2.2
COPB1-212ENST00000534771 HILS1P60008 231 aa1.28□□□□□ -2.2
COPB1-212ENST00000534771 CDK17Q00537 523 aa1.28□□□□□ -2.2
COPB1-212ENST00000534771 ITIH3Q06033 890 aa1.28□□□□□ -2.2
COPB1-212ENST00000534771 SERINC3Q13530 473 aa1.28□□□□□ -2.2
COPB1-212ENST00000534771 DYRK1AQ13627 763 aa1.28□□□□□ -2.2
COPB1-212ENST00000534771 RABEP1Q15276 862 aa1.28□□□□□ -2.2
COPB1-212ENST00000534771 UGT8Q16880 541 aa1.28□□□□□ -2.2
COPB1-212ENST00000534771 TXNRD1Q16881 649 aa1.28□□□□□ -2.2
COPB1-212ENST00000534771 PROSER3Q2NL68 480 aa1.28□□□□□ -2.2
COPB1-212ENST00000534771 SUPT20HL1Q3ZLR7 823 aa1.28□□□□□ -2.2
COPB1-212ENST00000534771 CD300EQ496F6 205 aaPredicted RBP1.28□□□□□ -2.2
COPB1-212ENST00000534771 CT83Q5H943 113 aa1.28□□□□□ -2.2
COPB1-212ENST00000534771 PLAC9Q5JTB6 97 aa1.28□□□□□ -2.2
COPB1-212ENST00000534771 PRAMEF17Q5VTA0 474 aa1.28□□□□□ -2.2
COPB1-212ENST00000534771 CEP85Q6P2H3 762 aa1.28□□□□□ -2.2
COPB1-212ENST00000534771 SLC2A7Q6PXP3 512 aa1.28□□□□□ -2.2
COPB1-212ENST00000534771 ZNF66Q6ZN08 573 aa1.28□□□□□ -2.2
COPB1-212ENST00000534771 SEM1Q6ZVN7 128 aa1.28□□□□□ -2.2
COPB1-212ENST00000534771 MEPCEQ7L2J0 689 aaKnown RBP1.28□□□□□ -2.2
COPB1-212ENST00000534771 LILRB2Q8N423 598 aa1.28□□□□□ -2.2
COPB1-212ENST00000534771 CAMKK1Q8N5S9 505 aa1.28□□□□□ -2.2
COPB1-212ENST00000534771 NLGN4YQ8NFZ3 816 aaPredicted RBP1.28□□□□□ -2.2
COPB1-212ENST00000534771 MYCBPAPQ8TBZ2 947 aa1.28□□□□□ -2.2
COPB1-212ENST00000534771 TBC1D15Q8TC07 691 aa1.28□□□□□ -2.2
COPB1-212ENST00000534771 FATE1Q969F0 183 aa1.28□□□□□ -2.2
COPB1-212ENST00000534771 TMEM125Q96AQ2 219 aa1.28□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms