RNA–Protein interactions for RNA: ENST00000525396.5

CHEK1-207, Transcript of checkpoint kinase 1, humanhuman

TSL 2

Gene CHEK1, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-207ENST00000525396 SMAD4Q13485 552 aaKnown RBP16.94■□□□□ 0.3
CHEK1-207ENST00000525396 SYCE2Q6PIF2 218 aa16.94■□□□□ 0.3
CHEK1-207ENST00000525396 HS2ST1Q7LGA3 356 aa16.94■□□□□ 0.3
CHEK1-207ENST00000525396 C12orf56Q8IXR9 622 aa16.94■□□□□ 0.3
CHEK1-207ENST00000525396 FEZF2Q8TBJ5 459 aa16.94■□□□□ 0.3
CHEK1-207ENST00000525396 ADAMTS19Q8TE59 1207 aa16.94■□□□□ 0.3
CHEK1-207ENST00000525396 SUSD3Q96L08 255 aa16.94■□□□□ 0.3
CHEK1-207ENST00000525396 FBXL18Q96ME1 805 aa16.94■□□□□ 0.3
CHEK1-207ENST00000525396 TIGD1Q96MW7 591 aa16.94■□□□□ 0.3
CHEK1-207ENST00000525396 NECAB3Q96P71 396 aaPredicted RBP16.94■□□□□ 0.3
CHEK1-207ENST00000525396 APOL5Q9BWW9 433 aa16.94■□□□□ 0.3
CHEK1-207ENST00000525396 COL25A1Q9BXS0 654 aaPredicted RBP16.94■□□□□ 0.3
CHEK1-207ENST00000525396 PDE11AQ9HCR9 933 aa16.94■□□□□ 0.3
CHEK1-207ENST00000525396 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.94■□□□□ 0.3
CHEK1-207ENST00000525396 FNIP2Q9P278 1114 aa16.94■□□□□ 0.3
CHEK1-207ENST00000525396 NUB1Q9Y5A7 615 aa16.94■□□□□ 0.3
CHEK1-207ENST00000525396 C5orf42Q9H799 3197 aa16.94■□□□□ 0.3
CHEK1-207ENST00000525396 A0A0C4DFX4 3053 aa16.93■□□□□ 0.3
CHEK1-207ENST00000525396 ANO9A1A5B4 782 aa16.93■□□□□ 0.3
CHEK1-207ENST00000525396 ADAM12O43184 909 aa16.93■□□□□ 0.3
CHEK1-207ENST00000525396 TRAPPC3O43617 180 aa16.93■□□□□ 0.3
CHEK1-207ENST00000525396 AARSP49588 968 aaKnown RBP eCLIP16.93■□□□□ 0.3
CHEK1-207ENST00000525396 SNRPFP62306 86 aaKnown RBP16.93■□□□□ 0.3
CHEK1-207ENST00000525396 CREMQ03060 361 aa16.93■□□□□ 0.3
CHEK1-207ENST00000525396 C9orf57Q5W0N0 161 aa16.93■□□□□ 0.3
CHEK1-207ENST00000525396 PPFIBP1Q86W92 1011 aa16.93■□□□□ 0.3
CHEK1-207ENST00000525396 CCDC47Q96A33 483 aaKnown RBP16.93■□□□□ 0.3
CHEK1-207ENST00000525396 CCDC34Q96HJ3 373 aa16.93■□□□□ 0.3
CHEK1-207ENST00000525396 CLSTN3Q9BQT9 956 aa16.93■□□□□ 0.3
CHEK1-207ENST00000525396 MTRRQ9UBK8 725 aa16.93■□□□□ 0.3
CHEK1-207ENST00000525396 CDH22Q9UJ99 828 aa16.93■□□□□ 0.3
CHEK1-207ENST00000525396 USP15Q9Y4E8 981 aaPredicted RBP16.93■□□□□ 0.3
CHEK1-207ENST00000525396 SPTLC1O15269 473 aa16.92■□□□□ 0.3
CHEK1-207ENST00000525396 GLUD1P00367 558 aa16.92■□□□□ 0.3
CHEK1-207ENST00000525396 SNRNP35Q16560 246 aaKnown RBP16.92■□□□□ 0.3
CHEK1-207ENST00000525396 PUS10Q3MIT2 529 aaKnown RBP16.92■□□□□ 0.3
CHEK1-207ENST00000525396 VARS2Q5ST30 1063 aaKnown RBP16.92■□□□□ 0.3
CHEK1-207ENST00000525396 LMBRD2Q68DH5 695 aaPredicted RBP16.92■□□□□ 0.3
CHEK1-207ENST00000525396 SCARA3Q6AZY7 606 aa16.92■□□□□ 0.3
CHEK1-207ENST00000525396 RSPO2Q6UXX9 243 aaPredicted RBP16.92■□□□□ 0.3
CHEK1-207ENST00000525396 NT5DC4Q86YG4 428 aa16.92■□□□□ 0.3
CHEK1-207ENST00000525396 SMYD4Q8IYR2 804 aaPredicted RBP16.92■□□□□ 0.3
CHEK1-207ENST00000525396 XXYLT1Q8NBI6 393 aa16.92■□□□□ 0.3
CHEK1-207ENST00000525396 SPATA20Q8TB22 786 aa16.92■□□□□ 0.3
CHEK1-207ENST00000525396 IPO9Q96P70 1041 aaKnown RBP16.92■□□□□ 0.3
CHEK1-207ENST00000525396 S1PR5Q9H228 398 aa16.92■□□□□ 0.3
CHEK1-207ENST00000525396 MAN1C1Q9NR34 630 aa16.92■□□□□ 0.3
CHEK1-207ENST00000525396 DZANK1Q9NVP4 752 aa16.92■□□□□ 0.3
CHEK1-207ENST00000525396 DPP3Q9NY33 737 aa16.92■□□□□ 0.3
CHEK1-207ENST00000525396 CGNQ9P2M7 1197 aaKnown RBP16.92■□□□□ 0.3
CHEK1-207ENST00000525396 MAPK8IP1Q9UQF2 711 aa16.92■□□□□ 0.3
CHEK1-207ENST00000525396 ZNF233A6NK53 670 aa16.91■□□□□ 0.3
CHEK1-207ENST00000525396 M0QZQ0 153 aa16.91■□□□□ 0.3
CHEK1-207ENST00000525396 TULP1O00294 542 aaPredicted RBP16.91■□□□□ 0.3
CHEK1-207ENST00000525396 PIRO00625 290 aa16.91■□□□□ 0.3
CHEK1-207ENST00000525396 SYN3O14994 580 aa16.91■□□□□ 0.3
CHEK1-207ENST00000525396 TGM5O43548 720 aa16.91■□□□□ 0.3
CHEK1-207ENST00000525396 KINO60870 393 aaKnown RBP16.91■□□□□ 0.3
CHEK1-207ENST00000525396 UBE2HP62256 183 aa16.91■□□□□ 0.3
CHEK1-207ENST00000525396 TFAMQ00059 246 aaKnown RBP16.91■□□□□ 0.3
CHEK1-207ENST00000525396 CYP24A1Q07973 514 aa16.91■□□□□ 0.3
CHEK1-207ENST00000525396 SMAD2Q15796 467 aaKnown RBP16.91■□□□□ 0.3
CHEK1-207ENST00000525396 PDXDC1Q6P996 788 aa16.91■□□□□ 0.3
CHEK1-207ENST00000525396 ANKS3Q6ZW76 656 aa16.91■□□□□ 0.3
CHEK1-207ENST00000525396 PALB2Q86YC2 1186 aa16.91■□□□□ 0.3
CHEK1-207ENST00000525396 C12orf76Q8N812 135 aaPredicted RBP16.91■□□□□ 0.3
CHEK1-207ENST00000525396 C1orf127Q8N9H9 656 aa16.91■□□□□ 0.3
CHEK1-207ENST00000525396 RDH13Q8NBN7 331 aa16.91■□□□□ 0.3
CHEK1-207ENST00000525396 CXorf38Q8TB03 319 aa16.91■□□□□ 0.3
CHEK1-207ENST00000525396 GOLGA5Q8TBA6 731 aa16.91■□□□□ 0.3
CHEK1-207ENST00000525396 MTMR12Q9C0I1 747 aa16.91■□□□□ 0.3
CHEK1-207ENST00000525396 GZF1Q9H116 711 aaPredicted RBP16.91■□□□□ 0.3
CHEK1-207ENST00000525396 KIAA1586Q9HCI6 787 aa16.91■□□□□ 0.3
CHEK1-207ENST00000525396 PCDHB8Q9UN66 801 aa16.91■□□□□ 0.3
CHEK1-207ENST00000525396 PCDHA5Q9Y5H7 936 aa16.91■□□□□ 0.3
CHEK1-207ENST00000525396 PDXKO00764 312 aa16.9■□□□□ 0.3
CHEK1-207ENST00000525396 NR3C1P04150 777 aa16.9■□□□□ 0.3
CHEK1-207ENST00000525396 ITGB3P05106 788 aa16.9■□□□□ 0.3
CHEK1-207ENST00000525396 SPATA31D3P0C874 917 aa16.9■□□□□ 0.3
CHEK1-207ENST00000525396 HOXB8P17481 243 aaPredicted RBP16.9■□□□□ 0.3
CHEK1-207ENST00000525396 LILRA4P59901 499 aa16.9■□□□□ 0.3
CHEK1-207ENST00000525396 MRPL58Q14197 206 aaKnown RBP16.9■□□□□ 0.3
CHEK1-207ENST00000525396 RARS2Q5T160 578 aaKnown RBP16.9■□□□□ 0.3
CHEK1-207ENST00000525396 LILRA6Q6PI73 481 aa16.9■□□□□ 0.3
CHEK1-207ENST00000525396 SPATA31D4Q6ZUB0 917 aa16.9■□□□□ 0.3
CHEK1-207ENST00000525396 GUF1Q8N442 669 aaKnown RBP16.9■□□□□ 0.3
CHEK1-207ENST00000525396 OR5B17Q8NGF7 314 aa16.9■□□□□ 0.3
CHEK1-207ENST00000525396 SUSD6Q92537 303 aa16.9■□□□□ 0.3
CHEK1-207ENST00000525396 GSDMAQ96QA5 445 aa16.9■□□□□ 0.3
CHEK1-207ENST00000525396 UHRF1Q96T88 793 aaPredicted RBP16.9■□□□□ 0.3
CHEK1-207ENST00000525396 SFXN1Q9H9B4 322 aa16.9■□□□□ 0.3
CHEK1-207ENST00000525396 DMAC2Q9NW81 257 aa16.9■□□□□ 0.3
CHEK1-207ENST00000525396 RMND1Q9NWS8 449 aa16.9■□□□□ 0.3
CHEK1-207ENST00000525396 BACE2Q9Y5Z0 518 aa16.9■□□□□ 0.3
CHEK1-207ENST00000525396 CDY1Q9Y6F8 540 aa16.9■□□□□ 0.3
CHEK1-207ENST00000525396 TBC1D4O60343 1298 aa16.89■□□□□ 0.29
CHEK1-207ENST00000525396 EXOC3O60645 756 aa16.89■□□□□ 0.29
CHEK1-207ENST00000525396 PRPF40AO75400 957 aaKnown RBP16.89■□□□□ 0.29
CHEK1-207ENST00000525396 WEE2P0C1S8 567 aa16.89■□□□□ 0.29
CHEK1-207ENST00000525396 TMEM191BP0C7N4 346 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms