RNA–Protein interactions for RNA: ENST00000521600.5

PVT1-211, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 408 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-211ENST00000521600 HOMER1Q86YM7 354 aa4.37□□□□□ -1.71
PVT1-211ENST00000521600 CNGA4Q8IV77 575 aa4.37□□□□□ -1.71
PVT1-211ENST00000521600 TEX2Q8IWB9 1127 aa4.37□□□□□ -1.71
PVT1-211ENST00000521600 GRAMD1CQ8IYS0 662 aa4.37□□□□□ -1.71
PVT1-211ENST00000521600 PDCL2Q8N4E4 241 aa4.37□□□□□ -1.71
PVT1-211ENST00000521600 ACER1Q8TDN7 264 aa4.37□□□□□ -1.71
PVT1-211ENST00000521600 ATOH1Q92858 354 aaPredicted RBP4.37□□□□□ -1.71
PVT1-211ENST00000521600 RMDN1Q96DB5 314 aa4.37□□□□□ -1.71
PVT1-211ENST00000521600 IQCDQ96DY2 449 aa4.37□□□□□ -1.71
PVT1-211ENST00000521600 CEP95Q96GE4 821 aa4.37□□□□□ -1.71
PVT1-211ENST00000521600 CALML4Q96GE6 196 aa4.37□□□□□ -1.71
PVT1-211ENST00000521600 PPP1R13BQ96KQ4 1090 aa4.37□□□□□ -1.71
PVT1-211ENST00000521600 FANCD2OSQ96PS1 177 aa4.37□□□□□ -1.71
PVT1-211ENST00000521600 BAG1Q99933 345 aaPredicted RBP4.37□□□□□ -1.71
PVT1-211ENST00000521600 TMPRSS13Q9BYE2 586 aa4.37□□□□□ -1.71
PVT1-211ENST00000521600 TRIM55Q9BYV6 548 aa4.37□□□□□ -1.71
PVT1-211ENST00000521600 MRPL18Q9H0U6 180 aaKnown RBP4.37□□□□□ -1.71
PVT1-211ENST00000521600 TMX1Q9H3N1 280 aa4.37□□□□□ -1.71
PVT1-211ENST00000521600 HIPK3Q9H422 1215 aa4.37□□□□□ -1.71
PVT1-211ENST00000521600 THAP9Q9H5L6 903 aa4.37□□□□□ -1.71
PVT1-211ENST00000521600 PIF1Q9H611 641 aa4.37□□□□□ -1.71
PVT1-211ENST00000521600 ZSWIM4Q9H7M6 989 aa4.37□□□□□ -1.71
PVT1-211ENST00000521600 SUGCTQ9HAC7 445 aa4.37□□□□□ -1.71
PVT1-211ENST00000521600 CYP4F12Q9HCS2 524 aa4.37□□□□□ -1.71
PVT1-211ENST00000521600 TLR9Q9NR96 1032 aa4.37□□□□□ -1.71
PVT1-211ENST00000521600 NOP53Q9NZM5 478 aaKnown RBP4.37□□□□□ -1.71
PVT1-211ENST00000521600 CGNQ9P2M7 1197 aaKnown RBP4.37□□□□□ -1.71
PVT1-211ENST00000521600 MAGEC2Q9UBF1 373 aaPredicted RBP4.37□□□□□ -1.71
PVT1-211ENST00000521600 REV1Q9UBZ9 1251 aa4.37□□□□□ -1.71
PVT1-211ENST00000521600 STK17AQ9UEE5 414 aa4.37□□□□□ -1.71
PVT1-211ENST00000521600 KLHL3Q9UH77 587 aa4.37□□□□□ -1.71
PVT1-211ENST00000521600 LIMA1Q9UHB6 759 aaKnown RBP4.37□□□□□ -1.71
PVT1-211ENST00000521600 SERPINB13Q9UIV8 391 aa4.37□□□□□ -1.71
PVT1-211ENST00000521600 CTNND2Q9UQB3 1225 aa4.37□□□□□ -1.71
PVT1-211ENST00000521600 GRIN2DO15399 1336 aa4.37□□□□□ -1.71
PVT1-211ENST00000521600 ITIH6Q6UXX5 1313 aa4.37□□□□□ -1.71
PVT1-211ENST00000521600 PHLPP2Q6ZVD8 1323 aa4.37□□□□□ -1.71
PVT1-211ENST00000521600 GREB1LQ9C091 1923 aaPredicted RBP4.36□□□□□ -1.71
PVT1-211ENST00000521600 SMG1Q96Q15 3661 aaKnown RBP4.36□□□□□ -1.71
PVT1-211ENST00000521600 LOC400499M0QZD8 3231 aa4.36□□□□□ -1.71
PVT1-211ENST00000521600 IGKV6D-41A0A0C4DH26 115 aa4.36□□□□□ -1.71
PVT1-211ENST00000521600 A0A0U1RQG5 324 aaPredicted RBP4.36□□□□□ -1.71
PVT1-211ENST00000521600 TMEM232C9JQI7 657 aa4.36□□□□□ -1.71
PVT1-211ENST00000521600 MPHOSPH10O00566 681 aaKnown RBP4.36□□□□□ -1.71
PVT1-211ENST00000521600 KLF4O43474 513 aa4.36□□□□□ -1.71
PVT1-211ENST00000521600 STRNO43815 780 aa4.36□□□□□ -1.71
PVT1-211ENST00000521600 B4GALT4O60513 344 aa4.36□□□□□ -1.71
PVT1-211ENST00000521600 CCNT1O60563 726 aaKnown RBP4.36□□□□□ -1.71
PVT1-211ENST00000521600 RHOBTB3O94955 611 aa4.36□□□□□ -1.71
PVT1-211ENST00000521600 SLU7O95391 586 aaKnown RBP4.36□□□□□ -1.71
PVT1-211ENST00000521600 SNAI1O95863 264 aaPredicted RBP4.36□□□□□ -1.71
PVT1-211ENST00000521600 CCDC175P0C221 793 aa4.36□□□□□ -1.71
PVT1-211ENST00000521600 GOLGA8HP0CJ92 632 aa4.36□□□□□ -1.71
PVT1-211ENST00000521600 SNHG28P0DPA3 235 aa4.36□□□□□ -1.71
PVT1-211ENST00000521600 ADH5P11766 374 aa4.36□□□□□ -1.71
PVT1-211ENST00000521600 AKR1A1P14550 325 aa4.36□□□□□ -1.71
PVT1-211ENST00000521600 LORP23490 312 aaPredicted RBP4.36□□□□□ -1.71
PVT1-211ENST00000521600 CST5P28325 142 aaPredicted RBP4.36□□□□□ -1.71
PVT1-211ENST00000521600 USP14P54578 494 aa4.36□□□□□ -1.71
PVT1-211ENST00000521600 TUBB4BP68371 445 aa4.36□□□□□ -1.71
PVT1-211ENST00000521600 TUBB2AQ13885 445 aa4.36□□□□□ -1.71
PVT1-211ENST00000521600 PDIA5Q14554 519 aa4.36□□□□□ -1.71
PVT1-211ENST00000521600 PLS1Q14651 629 aa4.36□□□□□ -1.71
PVT1-211ENST00000521600 BMS1Q14692 1282 aaKnown RBP4.36□□□□□ -1.71
PVT1-211ENST00000521600 SEPT2Q15019 361 aa4.36□□□□□ -1.71
PVT1-211ENST00000521600 PPP2R5EQ16537 467 aa4.36□□□□□ -1.71
PVT1-211ENST00000521600 CALCRLQ16602 461 aa4.36□□□□□ -1.71
PVT1-211ENST00000521600 CCDC96Q2M329 555 aa4.36□□□□□ -1.71
PVT1-211ENST00000521600 LETM2Q2VYF4 491 aa4.36□□□□□ -1.71
PVT1-211ENST00000521600 ZNF792Q3KQV3 632 aa4.36□□□□□ -1.71
PVT1-211ENST00000521600 COBLL1Q53SF7 1204 aa4.36□□□□□ -1.71
PVT1-211ENST00000521600 E4F1Q66K89 784 aaPredicted RBP4.36□□□□□ -1.71
PVT1-211ENST00000521600 CNNM4Q6P4Q7 775 aa4.36□□□□□ -1.71
PVT1-211ENST00000521600 RUFY4Q6ZNE9 571 aa4.36□□□□□ -1.71
PVT1-211ENST00000521600 CABP7Q86V35 215 aa4.36□□□□□ -1.71
PVT1-211ENST00000521600 HERC6Q8IVU3 1022 aa4.36□□□□□ -1.71
PVT1-211ENST00000521600 ADHFE1Q8IWW8 467 aa4.36□□□□□ -1.71
PVT1-211ENST00000521600 ADSSL1Q8N142 457 aa4.36□□□□□ -1.71
PVT1-211ENST00000521600 IGSF22Q8N9C0 903 aa4.36□□□□□ -1.71
PVT1-211ENST00000521600 C12orf50Q8NA57 414 aaPredicted RBP4.36□□□□□ -1.71
PVT1-211ENST00000521600 ZSCAN1Q8NBB4 408 aa4.36□□□□□ -1.71
PVT1-211ENST00000521600 RBBP8NLQ8NC74 664 aaPredicted RBP4.36□□□□□ -1.71
PVT1-211ENST00000521600 OR6P1Q8NGX9 317 aa4.36□□□□□ -1.71
PVT1-211ENST00000521600 DCAF4Q8WV16 495 aa4.36□□□□□ -1.71
PVT1-211ENST00000521600 NELFBQ8WX92 580 aa4.36□□□□□ -1.71
PVT1-211ENST00000521600 EDAQ92838 391 aa4.36□□□□□ -1.71
PVT1-211ENST00000521600 CUL5Q93034 780 aa4.36□□□□□ -1.71
PVT1-211ENST00000521600 DHTKD1Q96HY7 919 aaPredicted RBP4.36□□□□□ -1.71
PVT1-211ENST00000521600 CDK5RAP3Q96JB5 506 aa4.36□□□□□ -1.71
PVT1-211ENST00000521600 GLT1D1Q96MS3 346 aa4.36□□□□□ -1.71
PVT1-211ENST00000521600 PIGSQ96S52 555 aa4.36□□□□□ -1.71
PVT1-211ENST00000521600 TUBB2BQ9BVA1 445 aa4.36□□□□□ -1.71
PVT1-211ENST00000521600 WNT10AQ9GZT5 417 aa4.36□□□□□ -1.71
PVT1-211ENST00000521600 SPATC1LQ9H0A9 340 aa4.36□□□□□ -1.71
PVT1-211ENST00000521600 TRPV6Q9H1D0 765 aa4.36□□□□□ -1.71
PVT1-211ENST00000521600 RPAP3Q9H6T3 665 aaPredicted RBP4.36□□□□□ -1.71
PVT1-211ENST00000521600 KANSL2Q9H9L4 492 aa4.36□□□□□ -1.71
PVT1-211ENST00000521600 RIC8AQ9NPQ8 531 aa4.36□□□□□ -1.71
PVT1-211ENST00000521600 SAMSN1Q9NSI8 373 aaKnown RBP4.36□□□□□ -1.71
PVT1-211ENST00000521600 EXOC1Q9NV70 894 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms