RNA–Protein interactions for RNA: ENST00000520880.1

CTHRC1-204, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 4 BASIC

Gene CTHRC1, Length 560 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-204ENST00000520880 C1QL1O75973 258 aa5.7□□□□□ -1.5
CTHRC1-204ENST00000520880 MATN4O95460 622 aa5.7□□□□□ -1.5
CTHRC1-204ENST00000520880 FCER1AP12319 257 aa5.7□□□□□ -1.5
CTHRC1-204ENST00000520880 KLF1Q13351 362 aaPredicted RBP5.7□□□□□ -1.5
CTHRC1-204ENST00000520880 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.7□□□□□ -1.5
CTHRC1-204ENST00000520880 COLGALT2Q8IYK4 626 aa5.7□□□□□ -1.5
CTHRC1-204ENST00000520880 SSH3Q8TE77 659 aa5.7□□□□□ -1.5
CTHRC1-204ENST00000520880 NELL1Q92832 810 aa5.7□□□□□ -1.5
CTHRC1-204ENST00000520880 RAB24Q969Q5 203 aa5.7□□□□□ -1.5
CTHRC1-204ENST00000520880 PDLIM2Q96JY6 352 aa5.7□□□□□ -1.5
CTHRC1-204ENST00000520880 SPATA5L1Q9BVQ7 753 aa5.7□□□□□ -1.5
CTHRC1-204ENST00000520880 SEMA4GQ9NTN9 838 aa5.7□□□□□ -1.5
CTHRC1-204ENST00000520880 CACNA2D1P54289 1103 aa5.69□□□□□ -1.5
CTHRC1-204ENST00000520880 CTXN1P60606 82 aa5.69□□□□□ -1.5
CTHRC1-204ENST00000520880 CREMQ03060 361 aa5.69□□□□□ -1.5
CTHRC1-204ENST00000520880 ARHGEF25Q86VW2 580 aa5.69□□□□□ -1.5
CTHRC1-204ENST00000520880 ATL2Q8NHH9 583 aa5.69□□□□□ -1.5
CTHRC1-204ENST00000520880 MED15Q96RN5 788 aa5.69□□□□□ -1.5
CTHRC1-204ENST00000520880 C11orf54Q9H0W9 315 aaPredicted RBP5.69□□□□□ -1.5
CTHRC1-204ENST00000520880 VSX1Q9NZR4 365 aaPredicted RBP5.69□□□□□ -1.5
CTHRC1-204ENST00000520880 TOP2AP11388 1531 aaKnown RBP5.69□□□□□ -1.5
CTHRC1-204ENST00000520880 PHLDB1Q86UU1 1377 aa5.68□□□□□ -1.5
CTHRC1-204ENST00000520880 EIF4G1Q04637 1599 aaKnown RBP5.68□□□□□ -1.5
CTHRC1-204ENST00000520880 LRRC3CA6NJW4 275 aa5.68□□□□□ -1.5
CTHRC1-204ENST00000520880 TRIM75PA6NK02 468 aa5.68□□□□□ -1.5
CTHRC1-204ENST00000520880 C1RP00736 705 aa5.68□□□□□ -1.5
CTHRC1-204ENST00000520880 SBK3P0C264 359 aa5.68□□□□□ -1.5
CTHRC1-204ENST00000520880 WASP42768 502 aa5.68□□□□□ -1.5
CTHRC1-204ENST00000520880 TARDBPQ13148 414 aaKnown RBP eCLIP5.68□□□□□ -1.5
CTHRC1-204ENST00000520880 AMOTL1Q8IY63 956 aa5.68□□□□□ -1.5
CTHRC1-204ENST00000520880 TLR10Q9BXR5 811 aa5.68□□□□□ -1.5
CTHRC1-204ENST00000520880 KLK15Q9H2R5 256 aa5.68□□□□□ -1.5
CTHRC1-204ENST00000520880 DMTF1Q9Y222 760 aa5.68□□□□□ -1.5
CTHRC1-204ENST00000520880 PEG3Q9GZU2 1588 aa5.67□□□□□ -1.5
CTHRC1-204ENST00000520880 TRGV11A0A075B6L2 103 aa5.67□□□□□ -1.5
CTHRC1-204ENST00000520880 HAUS5O94927 633 aa5.67□□□□□ -1.5
CTHRC1-204ENST00000520880 SF3B3Q15393 1217 aaKnown RBP5.67□□□□□ -1.5
CTHRC1-204ENST00000520880 CLUL1Q15846 466 aa5.67□□□□□ -1.5
CTHRC1-204ENST00000520880 SP5Q6BEB4 398 aaPredicted RBP5.67□□□□□ -1.5
CTHRC1-204ENST00000520880 CNTD1Q8N815 330 aa5.67□□□□□ -1.5
CTHRC1-204ENST00000520880 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.67□□□□□ -1.5
CTHRC1-204ENST00000520880 NLGN4YQ8NFZ3 816 aaPredicted RBP5.67□□□□□ -1.5
CTHRC1-204ENST00000520880 ZNF384Q8TF68 577 aa5.67□□□□□ -1.5
CTHRC1-204ENST00000520880 TUBD1Q9UJT1 453 aa5.67□□□□□ -1.5
CTHRC1-204ENST00000520880 FRMD4BQ9Y2L6 1034 aa5.67□□□□□ -1.5
CTHRC1-204ENST00000520880 KAT6AQ92794 2004 aa5.66□□□□□ -1.5
CTHRC1-204ENST00000520880 GRM6O15303 877 aa5.66□□□□□ -1.5
CTHRC1-204ENST00000520880 AGFG2O95081 481 aa5.66□□□□□ -1.5
CTHRC1-204ENST00000520880 NHLH1Q02575 133 aa5.66□□□□□ -1.5
CTHRC1-204ENST00000520880 INAVAQ3KP66 663 aa5.66□□□□□ -1.5
CTHRC1-204ENST00000520880 KIAA0895LQ68EN5 471 aa5.66□□□□□ -1.5
CTHRC1-204ENST00000520880 CBARPQ8N350 705 aaPredicted RBP5.66□□□□□ -1.5
CTHRC1-204ENST00000520880 IFI44Q8TCB0 444 aa5.66□□□□□ -1.5
CTHRC1-204ENST00000520880 JADE3Q92613 823 aa5.66□□□□□ -1.5
CTHRC1-204ENST00000520880 TMX3Q96JJ7 454 aa5.66□□□□□ -1.5
CTHRC1-204ENST00000520880 IL17RBQ9NRM6 502 aa5.66□□□□□ -1.5
CTHRC1-204ENST00000520880 PCDHA13Q9Y5I0 950 aa5.66□□□□□ -1.5
CTHRC1-204ENST00000520880 SMARCA2P51531 1590 aa5.65□□□□□ -1.5
CTHRC1-204ENST00000520880 A0A1W2PS29 197 aa5.65□□□□□ -1.5
CTHRC1-204ENST00000520880 PEX1O43933 1283 aa5.65□□□□□ -1.5
CTHRC1-204ENST00000520880 NDUFS2O75306 463 aa5.65□□□□□ -1.5
CTHRC1-204ENST00000520880 RBMXL2O75526 392 aaKnown RBP5.65□□□□□ -1.5
CTHRC1-204ENST00000520880 IARSP41252 1262 aaKnown RBP5.65□□□□□ -1.5
CTHRC1-204ENST00000520880 FOLR3P41439 243 aa5.65□□□□□ -1.5
CTHRC1-204ENST00000520880 ATP2B3Q16720 1220 aa5.65□□□□□ -1.5
CTHRC1-204ENST00000520880 LRCH2Q5VUJ6 765 aa5.65□□□□□ -1.5
CTHRC1-204ENST00000520880 SSH1Q8WYL5 1049 aa5.65□□□□□ -1.5
CTHRC1-204ENST00000520880 TMEM125Q96AQ2 219 aa5.65□□□□□ -1.5
CTHRC1-204ENST00000520880 TDP1Q9NUW8 608 aa5.65□□□□□ -1.5
CTHRC1-204ENST00000520880 ASB6Q9NWX5 421 aa5.65□□□□□ -1.5
CTHRC1-204ENST00000520880 SLC17A6Q9P2U8 582 aa5.65□□□□□ -1.5
CTHRC1-204ENST00000520880 CDYLQ9Y232 598 aa5.65□□□□□ -1.5
CTHRC1-204ENST00000520880 PRKAB1Q9Y478 270 aa5.65□□□□□ -1.5
CTHRC1-204ENST00000520880 YY2O15391 372 aa5.64□□□□□ -1.51
CTHRC1-204ENST00000520880 CLSTN1O94985 981 aa5.64□□□□□ -1.51
CTHRC1-204ENST00000520880 C5AR1P21730 350 aa5.64□□□□□ -1.51
CTHRC1-204ENST00000520880 GATA3P23771 443 aa5.64□□□□□ -1.51
CTHRC1-204ENST00000520880 CDC42EP1Q00587 391 aa5.64□□□□□ -1.51
CTHRC1-204ENST00000520880 FLYWCH1Q4VC44 716 aa5.64□□□□□ -1.51
CTHRC1-204ENST00000520880 PABPC1LQ4VXU2 614 aaKnown RBP5.64□□□□□ -1.51
CTHRC1-204ENST00000520880 UTP14CQ5TAP6 766 aaKnown RBP5.64□□□□□ -1.51
CTHRC1-204ENST00000520880 VWA1Q6PCB0 445 aa5.64□□□□□ -1.51
CTHRC1-204ENST00000520880 PGM2L1Q6PCE3 622 aa5.64□□□□□ -1.51
CTHRC1-204ENST00000520880 MIGA2Q7L4E1 593 aa5.64□□□□□ -1.51
CTHRC1-204ENST00000520880 RSPH3Q86UC2 560 aa5.64□□□□□ -1.51
CTHRC1-204ENST00000520880 DDX42Q86XP3 938 aaKnown RBP eCLIP5.64□□□□□ -1.51
CTHRC1-204ENST00000520880 C1orf162Q8NEQ5 155 aaPredicted RBP5.64□□□□□ -1.51
CTHRC1-204ENST00000520880 KLHL32Q96NJ5 620 aa5.64□□□□□ -1.51
CTHRC1-204ENST00000520880 SLC5A4Q9NY91 659 aa5.64□□□□□ -1.51
CTHRC1-204ENST00000520880 CTTNBP2NLQ9P2B4 639 aa5.64□□□□□ -1.51
CTHRC1-204ENST00000520880 SAP30BPQ9UHR5 308 aaKnown RBP5.64□□□□□ -1.51
CTHRC1-204ENST00000520880 PRAMEF33A0A0G2JMD5 474 aa5.63□□□□□ -1.51
CTHRC1-204ENST00000520880 INO80B-WBP1J3KQ70 363 aa5.63□□□□□ -1.51
CTHRC1-204ENST00000520880 PRAMEF10O60809 474 aa5.63□□□□□ -1.51
CTHRC1-204ENST00000520880 SRGNP10124 158 aa5.63□□□□□ -1.51
CTHRC1-204ENST00000520880 MTHFD1P11586 935 aaKnown RBP5.63□□□□□ -1.51
CTHRC1-204ENST00000520880 KCNA2P16389 499 aa5.63□□□□□ -1.51
CTHRC1-204ENST00000520880 ZNF280AP59817 542 aaPredicted RBP5.63□□□□□ -1.51
CTHRC1-204ENST00000520880 CD300EQ496F6 205 aaPredicted RBP5.63□□□□□ -1.51
CTHRC1-204ENST00000520880 SLC30A5Q8TAD4 765 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms