RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 GAS8O95995 478 aa8.08□□□□□ -1.12
NEDD9-208ENST00000504387 CYP1A1P04798 512 aaPredicted RBP8.08□□□□□ -1.12
NEDD9-208ENST00000504387 CTNNA2P26232 953 aa8.08□□□□□ -1.12
NEDD9-208ENST00000504387 ARHGAP4P98171 946 aa8.08□□□□□ -1.12
NEDD9-208ENST00000504387 SLFN13Q68D06 897 aa8.08□□□□□ -1.12
NEDD9-208ENST00000504387 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.08□□□□□ -1.12
NEDD9-208ENST00000504387 CLNKQ7Z7G1 428 aa8.08□□□□□ -1.12
NEDD9-208ENST00000504387 OLIG1Q8TAK6 271 aa8.08□□□□□ -1.12
NEDD9-208ENST00000504387 MAK16Q9BXY0 300 aaKnown RBP8.08□□□□□ -1.12
NEDD9-208ENST00000504387 HOMER2Q9NSB8 354 aa8.08□□□□□ -1.12
NEDD9-208ENST00000504387 LRRC4BQ9NT99 713 aa8.08□□□□□ -1.12
NEDD9-208ENST00000504387 TCEAL9Q9UHQ7 104 aa8.08□□□□□ -1.12
NEDD9-208ENST00000504387 DAGLAQ9Y4D2 1042 aa8.08□□□□□ -1.12
NEDD9-208ENST00000504387 KDM3AQ9Y4C1 1321 aa8.08□□□□□ -1.12
NEDD9-208ENST00000504387 CCDC88AQ3V6T2 1871 aa8.07□□□□□ -1.12
NEDD9-208ENST00000504387 MYOCOSA0A1B0GUC4 107 aa8.07□□□□□ -1.12
NEDD9-208ENST00000504387 ANKRD33BA6NCL7 494 aa8.07□□□□□ -1.12
NEDD9-208ENST00000504387 B2RBV5 119 aa8.07□□□□□ -1.12
NEDD9-208ENST00000504387 TJP3O95049 919 aa8.07□□□□□ -1.12
NEDD9-208ENST00000504387 PGM1P36871 562 aa8.07□□□□□ -1.12
NEDD9-208ENST00000504387 EPHB1P54762 984 aa8.07□□□□□ -1.12
NEDD9-208ENST00000504387 RTP1P59025 263 aa8.07□□□□□ -1.12
NEDD9-208ENST00000504387 ALCAMQ13740 583 aa8.07□□□□□ -1.12
NEDD9-208ENST00000504387 RINT1Q6NUQ1 792 aa8.07□□□□□ -1.12
NEDD9-208ENST00000504387 PPP1R21Q6ZMI0 780 aa8.07□□□□□ -1.12
NEDD9-208ENST00000504387 SLF2Q8IX21 1173 aa8.07□□□□□ -1.12
NEDD9-208ENST00000504387 RHOT2Q8IXI1 618 aa8.07□□□□□ -1.12
NEDD9-208ENST00000504387 PYDC1Q8WXC3 89 aa8.07□□□□□ -1.12
NEDD9-208ENST00000504387 ZNF75CPQ92670 426 aaPredicted RBP8.07□□□□□ -1.12
NEDD9-208ENST00000504387 PTPRN2Q92932 1015 aa8.07□□□□□ -1.12
NEDD9-208ENST00000504387 ROPN1BQ9BZX4 212 aaPredicted RBP8.07□□□□□ -1.12
NEDD9-208ENST00000504387 ROPN1Q9HAT0 212 aaPredicted RBP8.07□□□□□ -1.12
NEDD9-208ENST00000504387 POLLQ9UGP5 575 aa8.07□□□□□ -1.12
NEDD9-208ENST00000504387 TRAF3IP3Q9Y228 551 aa8.07□□□□□ -1.12
NEDD9-208ENST00000504387 AK5Q9Y6K8 562 aa8.07□□□□□ -1.12
NEDD9-208ENST00000504387 SLIT2O94813 1529 aa8.07□□□□□ -1.12
NEDD9-208ENST00000504387 PNMA6FA0A0J9YX94 578 aa8.07□□□□□ -1.12
NEDD9-208ENST00000504387 FAM237BA0A1B0GVD1 139 aa8.07□□□□□ -1.12
NEDD9-208ENST00000504387 RPS6KA4O75676 772 aa8.07□□□□□ -1.12
NEDD9-208ENST00000504387 DCTN3O75935 186 aa8.07□□□□□ -1.12
NEDD9-208ENST00000504387 SORBS2O94875 1100 aaKnown RBP8.07□□□□□ -1.12
NEDD9-208ENST00000504387 SERPINB2P05120 415 aa8.07□□□□□ -1.12
NEDD9-208ENST00000504387 BCRP11274 1271 aa8.07□□□□□ -1.12
NEDD9-208ENST00000504387 PTPN4P29074 926 aa8.07□□□□□ -1.12
NEDD9-208ENST00000504387 GCLCP48506 637 aaPredicted RBP8.07□□□□□ -1.12
NEDD9-208ENST00000504387 MARSP56192 900 aaKnown RBP8.07□□□□□ -1.12
NEDD9-208ENST00000504387 TMEM62Q0P6H9 643 aa8.07□□□□□ -1.12
NEDD9-208ENST00000504387 PDIA2Q13087 525 aaKnown RBP8.07□□□□□ -1.12
NEDD9-208ENST00000504387 GPS1Q13098 491 aa8.07□□□□□ -1.12
NEDD9-208ENST00000504387 FYB2Q5VWT5 728 aa8.07□□□□□ -1.12
NEDD9-208ENST00000504387 MFSD5Q6N075 450 aa8.07□□□□□ -1.12
NEDD9-208ENST00000504387 C16orf86Q6ZW13 317 aa8.07□□□□□ -1.12
NEDD9-208ENST00000504387 RIBC1Q8N443 379 aaPredicted RBP8.07□□□□□ -1.12
NEDD9-208ENST00000504387 LRRN4Q8WUT4 740 aa8.07□□□□□ -1.12
NEDD9-208ENST00000504387 ERLEC1Q96DZ1 483 aa8.07□□□□□ -1.12
NEDD9-208ENST00000504387 EIF2AK1Q9BQI3 630 aaKnown RBP8.07□□□□□ -1.12
NEDD9-208ENST00000504387 KIFC3Q9BVG8 833 aa8.07□□□□□ -1.12
NEDD9-208ENST00000504387 CYP4F11Q9HBI6 524 aa8.07□□□□□ -1.12
NEDD9-208ENST00000504387 K7ENM7 598 aa8.07□□□□□ -1.12
NEDD9-208ENST00000504387 GSC2O15499 205 aa8.07□□□□□ -1.12
NEDD9-208ENST00000504387 PSMG1O95456 288 aa8.07□□□□□ -1.12
NEDD9-208ENST00000504387 ATP6V1B1P15313 513 aa8.07□□□□□ -1.12
NEDD9-208ENST00000504387 DRG2P55039 364 aaKnown RBP8.07□□□□□ -1.12
NEDD9-208ENST00000504387 NPEPPSP55786 919 aa8.07□□□□□ -1.12
NEDD9-208ENST00000504387 NR1H3Q13133 447 aa8.07□□□□□ -1.12
NEDD9-208ENST00000504387 TMED1Q13445 227 aa8.07□□□□□ -1.12
NEDD9-208ENST00000504387 PEX6Q13608 980 aa8.07□□□□□ -1.12
NEDD9-208ENST00000504387 SIX1Q15475 284 aaPredicted RBP8.07□□□□□ -1.12
NEDD9-208ENST00000504387 PPP2R5EQ16537 467 aa8.07□□□□□ -1.12
NEDD9-208ENST00000504387 ZC3H12AQ5D1E8 599 aaKnown RBP8.07□□□□□ -1.12
NEDD9-208ENST00000504387 NUP188Q5SRE5 1749 aa8.07□□□□□ -1.12
NEDD9-208ENST00000504387 LPCAT4Q643R3 524 aa8.07□□□□□ -1.12
NEDD9-208ENST00000504387 ANKS1BQ7Z6G8 1248 aa8.07□□□□□ -1.12
NEDD9-208ENST00000504387 ERMNQ8TAM6 284 aa8.07□□□□□ -1.12
NEDD9-208ENST00000504387 MECRQ9BV79 373 aa8.07□□□□□ -1.12
NEDD9-208ENST00000504387 RIOX1Q9H6W3 641 aa8.07□□□□□ -1.12
NEDD9-208ENST00000504387 GALNT8Q9NY28 637 aa8.07□□□□□ -1.12
NEDD9-208ENST00000504387 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.07□□□□□ -1.12
NEDD9-208ENST00000504387 NEU2Q9Y3R4 380 aa8.07□□□□□ -1.12
NEDD9-208ENST00000504387 MIF4GDA9UHW6 222 aaKnown RBP8.06□□□□□ -1.12
NEDD9-208ENST00000504387 EDF1O60869 148 aaKnown RBP8.06□□□□□ -1.12
NEDD9-208ENST00000504387 ASMTLO95671 621 aa8.06□□□□□ -1.12
NEDD9-208ENST00000504387 TCF4P15884 667 aa8.06□□□□□ -1.12
NEDD9-208ENST00000504387 ARFIP2P53365 341 aa8.06□□□□□ -1.12
NEDD9-208ENST00000504387 HIRAP54198 1017 aaPredicted RBP8.06□□□□□ -1.12
NEDD9-208ENST00000504387 ALDH18A1P54886 795 aaKnown RBP8.06□□□□□ -1.12
NEDD9-208ENST00000504387 USP46P62068 366 aa8.06□□□□□ -1.12
NEDD9-208ENST00000504387 CNPY1Q3B7I2 92 aa8.06□□□□□ -1.12
NEDD9-208ENST00000504387 MTHFD1LQ6UB35 978 aa8.06□□□□□ -1.12
NEDD9-208ENST00000504387 POU5F2Q8N7G0 328 aa8.06□□□□□ -1.12
NEDD9-208ENST00000504387 SYT2Q8N9I0 419 aaPredicted RBP8.06□□□□□ -1.12
NEDD9-208ENST00000504387 FAM81AQ8TBF8 368 aa8.06□□□□□ -1.12
NEDD9-208ENST00000504387 TCP10LQ8TDR4 215 aa8.06□□□□□ -1.12
NEDD9-208ENST00000504387 C10orf82Q8WW14 230 aa8.06□□□□□ -1.12
NEDD9-208ENST00000504387 POMGNT1Q8WZA1 660 aa8.06□□□□□ -1.12
NEDD9-208ENST00000504387 AGPAT3Q9NRZ7 376 aa8.06□□□□□ -1.12
NEDD9-208ENST00000504387 TAS2R1Q9NYW7 299 aa8.06□□□□□ -1.12
NEDD9-208ENST00000504387 PPARGC1AQ9UBK2 798 aaKnown RBP8.06□□□□□ -1.12
NEDD9-208ENST00000504387 LRCH1Q9Y2L9 728 aa8.06□□□□□ -1.12
NEDD9-208ENST00000504387 TIAM2Q8IVF5 1701 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms