RNA–Protein interactions for RNA: ENST00000498107.5

SSBP1-214, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-214ENST00000498107 TTI2Q6NXR4 508 aa17.27■□□□□ 0.36
SSBP1-214ENST00000498107 CAVIN1Q6NZI2 390 aaKnown RBP17.27■□□□□ 0.36
SSBP1-214ENST00000498107 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.27■□□□□ 0.36
SSBP1-214ENST00000498107 RNF168Q8IYW5 571 aaPredicted RBP17.27■□□□□ 0.36
SSBP1-214ENST00000498107 PARD3BQ8TEW8 1205 aa17.27■□□□□ 0.36
SSBP1-214ENST00000498107 HASPINQ8TF76 798 aa17.27■□□□□ 0.36
SSBP1-214ENST00000498107 METTL14Q9HCE5 456 aaKnown RBP17.27■□□□□ 0.36
SSBP1-214ENST00000498107 MRPL17Q9NRX2 175 aaKnown RBP17.27■□□□□ 0.36
SSBP1-214ENST00000498107 ANO10Q9NW15 660 aa17.27■□□□□ 0.36
SSBP1-214ENST00000498107 CACNG4Q9UBN1 327 aa17.27■□□□□ 0.36
SSBP1-214ENST00000498107 IRAK3Q9Y616 596 aa17.27■□□□□ 0.36
SSBP1-214ENST00000498107 F8W810 466 aa17.26■□□□□ 0.35
SSBP1-214ENST00000498107 PIRO00625 290 aa17.26■□□□□ 0.35
SSBP1-214ENST00000498107 SYN3O14994 580 aa17.26■□□□□ 0.35
SSBP1-214ENST00000498107 NCK2O43639 380 aa17.26■□□□□ 0.35
SSBP1-214ENST00000498107 STX10O60499 249 aa17.26■□□□□ 0.35
SSBP1-214ENST00000498107 CXCL14O95715 111 aa17.26■□□□□ 0.35
SSBP1-214ENST00000498107 GNA14O95837 355 aa17.26■□□□□ 0.35
SSBP1-214ENST00000498107 CA8P35219 290 aa17.26■□□□□ 0.35
SSBP1-214ENST00000498107 TAF6P49848 677 aa17.26■□□□□ 0.35
SSBP1-214ENST00000498107 VAMP7P51809 220 aa17.26■□□□□ 0.35
SSBP1-214ENST00000498107 GUCY2FP51841 1108 aa17.26■□□□□ 0.35
SSBP1-214ENST00000498107 WNT7BP56706 349 aa17.26■□□□□ 0.35
SSBP1-214ENST00000498107 CLDN10P78369 228 aa17.26■□□□□ 0.35
SSBP1-214ENST00000498107 DSG1Q02413 1049 aa17.26■□□□□ 0.35
SSBP1-214ENST00000498107 FAM171A1Q5VUB5 890 aa17.26■□□□□ 0.35
SSBP1-214ENST00000498107 PLPP4Q5VZY2 271 aa17.26■□□□□ 0.35
SSBP1-214ENST00000498107 FILIP1Q7Z7B0 1213 aa17.26■□□□□ 0.35
SSBP1-214ENST00000498107 CSGALNACT2Q8N6G5 542 aa17.26■□□□□ 0.35
SSBP1-214ENST00000498107 LRRC52Q8N7C0 313 aa17.26■□□□□ 0.35
SSBP1-214ENST00000498107 TTPALQ9BTX7 342 aa17.26■□□□□ 0.35
SSBP1-214ENST00000498107 GPR62Q9BZJ7 368 aa17.26■□□□□ 0.35
SSBP1-214ENST00000498107 MTMR12Q9C0I1 747 aa17.26■□□□□ 0.35
SSBP1-214ENST00000498107 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.26■□□□□ 0.354e-9■□□□□ 11.1
SSBP1-214ENST00000498107 TMEM63CQ9P1W3 806 aa17.26■□□□□ 0.35
SSBP1-214ENST00000498107 ITGB3P05106 788 aa17.25■□□□□ 0.35
SSBP1-214ENST00000498107 KRT19P08727 400 aa17.25■□□□□ 0.35
SSBP1-214ENST00000498107 STX17P56962 302 aa17.25■□□□□ 0.35
SSBP1-214ENST00000498107 BFSP1Q12934 665 aa17.25■□□□□ 0.35
SSBP1-214ENST00000498107 MYO1EQ12965 1108 aa17.25■□□□□ 0.35
SSBP1-214ENST00000498107 STX1AQ16623 288 aa17.25■□□□□ 0.35
SSBP1-214ENST00000498107 TPD52L1Q16890 204 aaPredicted RBP17.25■□□□□ 0.35
SSBP1-214ENST00000498107 DPCR1Q3MIW9 517 aa17.25■□□□□ 0.35
SSBP1-214ENST00000498107 SV2CQ496J9 727 aa17.25■□□□□ 0.35
SSBP1-214ENST00000498107 LMBRD2Q68DH5 695 aaPredicted RBP17.25■□□□□ 0.35
SSBP1-214ENST00000498107 TRAPPC11Q7Z392 1133 aa17.25■□□□□ 0.35
SSBP1-214ENST00000498107 MICALL1Q8N3F8 863 aa17.25■□□□□ 0.35
SSBP1-214ENST00000498107 MRPL43Q8N983 215 aaKnown RBP17.25■□□□□ 0.35
SSBP1-214ENST00000498107 C1orf127Q8N9H9 656 aa17.25■□□□□ 0.35
SSBP1-214ENST00000498107 C3orf58Q8NDZ4 430 aa17.25■□□□□ 0.35
SSBP1-214ENST00000498107 APPL2Q8NEU8 664 aa17.25■□□□□ 0.35
SSBP1-214ENST00000498107 SUSD3Q96L08 255 aa17.25■□□□□ 0.35
SSBP1-214ENST00000498107 CDCA3Q99618 268 aaPredicted RBP17.25■□□□□ 0.35
SSBP1-214ENST00000498107 VN1R3Q9BXE9 311 aa17.25■□□□□ 0.35
SSBP1-214ENST00000498107 EMILIN2Q9BXX0 1053 aa17.25■□□□□ 0.35
SSBP1-214ENST00000498107 CHST7Q9NS84 486 aa17.25■□□□□ 0.35
SSBP1-214ENST00000498107 ARMCX3Q9UH62 379 aaPredicted RBP17.25■□□□□ 0.35
SSBP1-214ENST00000498107 AGAP1Q9UPQ3 857 aa17.25■□□□□ 0.35
SSBP1-214ENST00000498107 MYO7AQ13402 2215 aa17.25■□□□□ 0.35
SSBP1-214ENST00000498107 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.24■□□□□ 0.35
SSBP1-214ENST00000498107 C2orf71A6NGG8 1288 aa17.24■□□□□ 0.35
SSBP1-214ENST00000498107 LRRIQ3A6PVS8 624 aaPredicted RBP17.24■□□□□ 0.35
SSBP1-214ENST00000498107 PHACTR2O75167 634 aa17.24■□□□□ 0.35
SSBP1-214ENST00000498107 CSPG5O95196 566 aa17.24■□□□□ 0.35
SSBP1-214ENST00000498107 FGFR3P22607 806 aa17.24■□□□□ 0.35
SSBP1-214ENST00000498107 POLR2BP30876 1174 aaKnown RBP17.24■□□□□ 0.35
SSBP1-214ENST00000498107 GTF2H1P32780 548 aa17.24■□□□□ 0.35
SSBP1-214ENST00000498107 IRS1P35568 1242 aa17.24■□□□□ 0.35
SSBP1-214ENST00000498107 BRCC3P46736 316 aa17.24■□□□□ 0.35
SSBP1-214ENST00000498107 AARSP49588 968 aaKnown RBP eCLIP17.24■□□□□ 0.35
SSBP1-214ENST00000498107 LILRA4P59901 499 aa17.24■□□□□ 0.35
SSBP1-214ENST00000498107 MCCD1P59942 119 aaPredicted RBP17.24■□□□□ 0.35
SSBP1-214ENST00000498107 TRPC3Q13507 836 aa17.24■□□□□ 0.35
SSBP1-214ENST00000498107 PTPN14Q15678 1187 aa17.24■□□□□ 0.35
SSBP1-214ENST00000498107 CCDC40Q4G0X9 1142 aa17.24■□□□□ 0.35
SSBP1-214ENST00000498107 CD300LGQ6UXG3 332 aa17.24■□□□□ 0.35
SSBP1-214ENST00000498107 DSTYKQ6XUX3 929 aa17.24■□□□□ 0.35
SSBP1-214ENST00000498107 FRMD5Q7Z6J6 570 aa17.24■□□□□ 0.35
SSBP1-214ENST00000498107 CEP57Q86XR8 500 aa17.24■□□□□ 0.35
SSBP1-214ENST00000498107 OR5B17Q8NGF7 314 aa17.24■□□□□ 0.35
SSBP1-214ENST00000498107 POP1Q99575 1024 aaKnown RBP17.24■□□□□ 0.35
SSBP1-214ENST00000498107 DUSP9Q99956 384 aaKnown RBP17.24■□□□□ 0.35
SSBP1-214ENST00000498107 TLE6Q9H808 572 aa17.24■□□□□ 0.35
SSBP1-214ENST00000498107 PCDHB8Q9UN66 801 aa17.24■□□□□ 0.35
SSBP1-214ENST00000498107 PTPRJQ12913 1337 aa17.23■□□□□ 0.35
SSBP1-214ENST00000498107 H7C4K7 107 aa17.23■□□□□ 0.35
SSBP1-214ENST00000498107 M0QZQ0 153 aa17.23■□□□□ 0.35
SSBP1-214ENST00000498107 CCDC192P0DO97 292 aa17.23■□□□□ 0.35
SSBP1-214ENST00000498107 ODC1P11926 461 aa17.23■□□□□ 0.35
SSBP1-214ENST00000498107 BIRC3Q13489 604 aa17.23■□□□□ 0.35
SSBP1-214ENST00000498107 KIAA0319Q5VV43 1072 aa17.23■□□□□ 0.35
SSBP1-214ENST00000498107 ANKS3Q6ZW76 656 aa17.23■□□□□ 0.35
SSBP1-214ENST00000498107 TAS1R1Q7RTX1 841 aa17.23■□□□□ 0.35
SSBP1-214ENST00000498107 PLEKHO2Q8TD55 490 aa17.23■□□□□ 0.35
SSBP1-214ENST00000498107 RIN2Q8WYP3 895 aaPredicted RBP17.23■□□□□ 0.35
SSBP1-214ENST00000498107 PIK3R5Q8WYR1 880 aa17.23■□□□□ 0.35
SSBP1-214ENST00000498107 EEF2KMTQ96G04 330 aa17.23■□□□□ 0.35
SSBP1-214ENST00000498107 BORCS6Q96GS4 357 aa17.23■□□□□ 0.35
SSBP1-214ENST00000498107 SRRTQ9BXP5 876 aaKnown RBP17.23■□□□□ 0.35
SSBP1-214ENST00000498107 DSEQ9UL01 958 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 109.3 ms