RNA–Protein interactions for RNA: ENST00000484042.1

FXR1-217, Transcript of FMR1 autosomal homolog 1, humanhuman

TSL 4

Gene FXR1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-217ENST00000484042 C1orf112Q9NSG2 853 aa6.45□□□□□ -1.38
FXR1-217ENST00000484042 LMBRD1Q9NUN5 540 aa6.45□□□□□ -1.38
FXR1-217ENST00000484042 EIF2B4Q9UI10 523 aaKnown RBP6.45□□□□□ -1.38
FXR1-217ENST00000484042 SORCS3Q9UPU3 1222 aa6.45□□□□□ -1.38
FXR1-217ENST00000484042 PCDHA3Q9Y5H8 950 aa6.45□□□□□ -1.38
FXR1-217ENST00000484042 NR2E3Q9Y5X4 410 aa6.45□□□□□ -1.38
FXR1-217ENST00000484042 AHRRA9YTQ3 701 aa6.44□□□□□ -1.38
FXR1-217ENST00000484042 B3GALT2O43825 422 aa6.44□□□□□ -1.38
FXR1-217ENST00000484042 PEX14O75381 377 aa6.44□□□□□ -1.38
FXR1-217ENST00000484042 TUSC2O75896 110 aa6.44□□□□□ -1.38
FXR1-217ENST00000484042 UBXN7O94888 489 aa6.44□□□□□ -1.38
FXR1-217ENST00000484042 SLC6A2P23975 617 aa6.44□□□□□ -1.38
FXR1-217ENST00000484042 SMARCA1P28370 1054 aa6.44□□□□□ -1.38
FXR1-217ENST00000484042 PRDX5P30044 214 aa6.44□□□□□ -1.38
FXR1-217ENST00000484042 PTTG1IPP53801 180 aa6.44□□□□□ -1.38
FXR1-217ENST00000484042 SLC25A3Q00325 362 aa6.44□□□□□ -1.38
FXR1-217ENST00000484042 MAP9Q49MG5 647 aa6.44□□□□□ -1.38
FXR1-217ENST00000484042 MIIPQ5JXC2 388 aa6.44□□□□□ -1.38
FXR1-217ENST00000484042 ZNF365Q70YC5 407 aa6.44□□□□□ -1.38
FXR1-217ENST00000484042 GDF7Q7Z4P5 450 aa6.44□□□□□ -1.38
FXR1-217ENST00000484042 CAMKK1Q8N5S9 505 aa6.44□□□□□ -1.38
FXR1-217ENST00000484042 FITM2Q8N6M3 262 aa6.44□□□□□ -1.38
FXR1-217ENST00000484042 ZBTB34Q8NCN2 500 aa6.44□□□□□ -1.38
FXR1-217ENST00000484042 LRFN3Q9BTN0 628 aa6.44□□□□□ -1.38
FXR1-217ENST00000484042 PACSIN1Q9BY11 444 aa6.44□□□□□ -1.38
FXR1-217ENST00000484042 GSTO2Q9H4Y5 243 aa6.44□□□□□ -1.38
FXR1-217ENST00000484042 GNL3LQ9NVN8 582 aaKnown RBP6.44□□□□□ -1.38
FXR1-217ENST00000484042 RLIMQ9NVW2 624 aa6.44□□□□□ -1.38
FXR1-217ENST00000484042 ABCF2Q9UG63 623 aa6.44□□□□□ -1.38
FXR1-217ENST00000484042 FEZ2Q9UHY8 353 aaPredicted RBP6.44□□□□□ -1.38
FXR1-217ENST00000484042 CTNND1O60716 968 aaKnown RBP6.43□□□□□ -1.38
FXR1-217ENST00000484042 ITGB1P05556 798 aa6.43□□□□□ -1.38
FXR1-217ENST00000484042 KRT18P05783 430 aaKnown RBP6.43□□□□□ -1.38
FXR1-217ENST00000484042 C1SP09871 688 aa6.43□□□□□ -1.38
FXR1-217ENST00000484042 AGFG1P52594 562 aaKnown RBP6.43□□□□□ -1.38
FXR1-217ENST00000484042 RNASE9P60153 205 aaKnown RBP6.43□□□□□ -1.38
FXR1-217ENST00000484042 FOXE3Q13461 319 aa6.43□□□□□ -1.38
FXR1-217ENST00000484042 GBX1Q14549 363 aa6.43□□□□□ -1.38
FXR1-217ENST00000484042 OVCH2Q7RTZ1 564 aa6.43□□□□□ -1.38
FXR1-217ENST00000484042 PPP1R35Q8TAP8 253 aa6.43□□□□□ -1.38
FXR1-217ENST00000484042 KLHDC4Q8TBB5 520 aa6.43□□□□□ -1.38
FXR1-217ENST00000484042 NUP133Q8WUM0 1156 aa6.43□□□□□ -1.38
FXR1-217ENST00000484042 PSMD1Q99460 953 aa6.43□□□□□ -1.38
FXR1-217ENST00000484042 SLITRK6Q9H5Y7 841 aa6.43□□□□□ -1.38
FXR1-217ENST00000484042 PNPOQ9NVS9 261 aa6.43□□□□□ -1.38
FXR1-217ENST00000484042 A0A088AWK7 358 aa6.42□□□□□ -1.38
FXR1-217ENST00000484042 GAGE12BA1L429 117 aa6.42□□□□□ -1.38
FXR1-217ENST00000484042 CDHR4A6H8M9 788 aa6.42□□□□□ -1.38
FXR1-217ENST00000484042 GAGE12HA6NDE8 117 aa6.42□□□□□ -1.38
FXR1-217ENST00000484042 PLEKHD1A6NEE1 506 aa6.42□□□□□ -1.38
FXR1-217ENST00000484042 ZNF185O15231 689 aa6.42□□□□□ -1.38
FXR1-217ENST00000484042 TPD52L2O43399 206 aaKnown RBP6.42□□□□□ -1.38
FXR1-217ENST00000484042 PRSS23O95084 383 aa6.42□□□□□ -1.38
FXR1-217ENST00000484042 SCAF4O95104 1147 aaKnown RBP6.42□□□□□ -1.38
FXR1-217ENST00000484042 ANXA1P04083 346 aa6.42□□□□□ -1.38
FXR1-217ENST00000484042 CKBP12277 381 aa6.42□□□□□ -1.38
FXR1-217ENST00000484042 HTR1BP28222 390 aa6.42□□□□□ -1.38
FXR1-217ENST00000484042 SLFN5Q08AF3 891 aa6.42□□□□□ -1.38
FXR1-217ENST00000484042 PLS1Q14651 629 aa6.42□□□□□ -1.38
FXR1-217ENST00000484042 PDCD4Q53EL6 469 aaKnown RBP6.42□□□□□ -1.38
FXR1-217ENST00000484042 CCDC93Q567U6 631 aa6.42□□□□□ -1.38
FXR1-217ENST00000484042 USP51Q70EK9 711 aa6.42□□□□□ -1.38
FXR1-217ENST00000484042 PDSS2Q86YH6 399 aa6.42□□□□□ -1.38
FXR1-217ENST00000484042 PLBD2Q8NHP8 589 aa6.42□□□□□ -1.38
FXR1-217ENST00000484042 CPT1CQ8TCG5 803 aa6.42□□□□□ -1.38
FXR1-217ENST00000484042 REXO4Q9GZR2 422 aaKnown RBP6.42□□□□□ -1.38
FXR1-217ENST00000484042 PCED1AQ9H1Q7 454 aa6.42□□□□□ -1.38
FXR1-217ENST00000484042 TMEM60Q9H2L4 133 aa6.42□□□□□ -1.38
FXR1-217ENST00000484042 MRPL46Q9H2W6 279 aaKnown RBP6.42□□□□□ -1.38
FXR1-217ENST00000484042 KLHL11Q9NVR0 708 aa6.42□□□□□ -1.38
FXR1-217ENST00000484042 TRPM5Q9NZQ8 1165 aa6.42□□□□□ -1.38
FXR1-217ENST00000484042 ZDHHC8Q9ULC8 765 aa6.42□□□□□ -1.38
FXR1-217ENST00000484042 ATP11BQ9Y2G3 1177 aa6.42□□□□□ -1.38
FXR1-217ENST00000484042 RIPOR2Q9Y4F9 1068 aa6.42□□□□□ -1.38
FXR1-217ENST00000484042 MARCH11A6NNE9 402 aa6.41□□□□□ -1.38
FXR1-217ENST00000484042 VSTM5A8MXK1 200 aa6.41□□□□□ -1.38
FXR1-217ENST00000484042 FAM20BO75063 409 aa6.41□□□□□ -1.38
FXR1-217ENST00000484042 SPATA31D3P0C874 917 aa6.41□□□□□ -1.38
FXR1-217ENST00000484042 NR4A1P22736 598 aa6.41□□□□□ -1.38
FXR1-217ENST00000484042 PIK3CGP48736 1102 aa6.41□□□□□ -1.38
FXR1-217ENST00000484042 RHBDL3P58872 404 aa6.41□□□□□ -1.38
FXR1-217ENST00000484042 RAB1AP62820 205 aa6.41□□□□□ -1.38
FXR1-217ENST00000484042 KRTAP1-1Q07627 177 aa6.41□□□□□ -1.38
FXR1-217ENST00000484042 UBE4AQ14139 1066 aa6.41□□□□□ -1.38
FXR1-217ENST00000484042 ANO6Q4KMQ2 910 aa6.41□□□□□ -1.38
FXR1-217ENST00000484042 EMC10Q5UCC4 262 aa6.41□□□□□ -1.38
FXR1-217ENST00000484042 LRRC55Q6ZSA7 311 aa6.41□□□□□ -1.38
FXR1-217ENST00000484042 SPATA31D4Q6ZUB0 917 aa6.41□□□□□ -1.38
FXR1-217ENST00000484042 CERS3Q8IU89 383 aa6.41□□□□□ -1.38
FXR1-217ENST00000484042 OR56A1Q8NGH5 318 aa6.41□□□□□ -1.38
FXR1-217ENST00000484042 MTFMTQ96DP5 389 aaKnown RBP6.41□□□□□ -1.38
FXR1-217ENST00000484042 SLC35A4Q96G79 324 aa6.41□□□□□ -1.38
FXR1-217ENST00000484042 PHACTR3Q96KR7 559 aa6.41□□□□□ -1.38
FXR1-217ENST00000484042 PLEKHG4BQ96PX9 1271 aa6.41□□□□□ -1.38
FXR1-217ENST00000484042 ARNT2Q9HBZ2 717 aa6.41□□□□□ -1.38
FXR1-217ENST00000484042 OBP2AQ9NY56 170 aa6.41□□□□□ -1.38
FXR1-217ENST00000484042 USP15Q9Y4E8 981 aaPredicted RBP6.41□□□□□ -1.38
FXR1-217ENST00000484042 PRSS29PA6NIE9 313 aa6.4□□□□□ -1.38
FXR1-217ENST00000484042 FAM227AF5H4B4 570 aa6.4□□□□□ -1.38
FXR1-217ENST00000484042 RNASET2O00584 256 aaKnown RBP6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms