RNA–Protein interactions for RNA: ENST00000475146.1

CPNE1-223, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 627 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-223ENST00000475146 CBWD1Q9BRT8 395 aa26.07■■□□□ 1.76
CPNE1-223ENST00000475146 ASB7Q9H672 318 aa26.07■■□□□ 1.76
CPNE1-223ENST00000475146 GDPD2Q9HCC8 539 aa26.07■■□□□ 1.76
CPNE1-223ENST00000475146 DERAQ9Y315 318 aa26.07■■□□□ 1.76
CPNE1-223ENST00000475146 BACE2Q9Y5Z0 518 aa26.07■■□□□ 1.76
CPNE1-223ENST00000475146 CDY1Q9Y6F8 540 aa26.07■■□□□ 1.76
CPNE1-223ENST00000475146 PI4K2BG5E9Z4 385 aa26.06■■□□□ 1.76
CPNE1-223ENST00000475146 EIF3DO15371 548 aaKnown RBP eCLIP26.06■■□□□ 1.76
CPNE1-223ENST00000475146 DCXO43602 365 aa26.06■■□□□ 1.76
CPNE1-223ENST00000475146 LIN9Q5TKA1 542 aa26.06■■□□□ 1.76
CPNE1-223ENST00000475146 CRELD2Q6UXH1 353 aaPredicted RBP26.06■■□□□ 1.76
CPNE1-223ENST00000475146 PCIF1Q9H4Z3 704 aa26.06■■□□□ 1.76
CPNE1-223ENST00000475146 USP25Q9UHP3 1055 aa26.06■■□□□ 1.76
CPNE1-223ENST00000475146 MUTYHQ9UIF7 546 aa26.06■■□□□ 1.76
CPNE1-223ENST00000475146 FBXW11Q9UKB1 542 aa26.06■■□□□ 1.76
CPNE1-223ENST00000475146 TCHHQ07283 1943 aa26.06■■□□□ 1.76
CPNE1-223ENST00000475146 GOLGA8IPA6NC78 632 aa26.05■■□□□ 1.76
CPNE1-223ENST00000475146 GOLGA8JA6NMD2 632 aa26.05■■□□□ 1.76
CPNE1-223ENST00000475146 IL18RAPO95256 599 aa26.05■■□□□ 1.76
CPNE1-223ENST00000475146 LDHAP00338 332 aaKnown RBP26.05■■□□□ 1.76
CPNE1-223ENST00000475146 ALADP13716 330 aa26.05■■□□□ 1.76
CPNE1-223ENST00000475146 SYKP43405 635 aa26.05■■□□□ 1.76
CPNE1-223ENST00000475146 POU5F1Q01860 360 aaKnown RBP26.05■■□□□ 1.76
CPNE1-223ENST00000475146 RAB33AQ14088 237 aa26.05■■□□□ 1.76
CPNE1-223ENST00000475146 APPL2Q8NEU8 664 aa26.05■■□□□ 1.76
CPNE1-223ENST00000475146 SMG7Q92540 1137 aaKnown RBP26.05■■□□□ 1.76
CPNE1-223ENST00000475146 PAGE5Q96GU1 130 aa26.05■■□□□ 1.76
CPNE1-223ENST00000475146 C1QTNF1Q9BXJ1 281 aa26.05■■□□□ 1.76
CPNE1-223ENST00000475146 PIDD1Q9HB75 910 aa26.05■■□□□ 1.76
CPNE1-223ENST00000475146 HPSEQ9Y251 543 aa26.05■■□□□ 1.76
CPNE1-223ENST00000475146 C2CD2Q9Y426 696 aa26.05■■□□□ 1.76
CPNE1-223ENST00000475146 PVALEFA0A1B0GWK0 134 aa26.04■■□□□ 1.76
CPNE1-223ENST00000475146 H7C4K7 107 aa26.04■■□□□ 1.76
CPNE1-223ENST00000475146 RSPO2Q6UXX9 243 aaPredicted RBP26.04■■□□□ 1.76
CPNE1-223ENST00000475146 CCDC149Q6ZUS6 474 aa26.04■■□□□ 1.76
CPNE1-223ENST00000475146 BRSK2Q8IWQ3 736 aa26.04■■□□□ 1.76
CPNE1-223ENST00000475146 FSIP1Q8NA03 581 aa26.04■■□□□ 1.76
CPNE1-223ENST00000475146 ZSWIM2Q8NEG5 633 aa26.04■■□□□ 1.76
CPNE1-223ENST00000475146 ZDHHC7Q9NXF8 308 aa26.04■■□□□ 1.76
CPNE1-223ENST00000475146 RBAKQ9NYW8 714 aaPredicted RBP26.04■■□□□ 1.76
CPNE1-223ENST00000475146 PCDHB8Q9UN66 801 aa26.04■■□□□ 1.76
CPNE1-223ENST00000475146 ANK1P16157 1881 aa26.03■■□□□ 1.76
CPNE1-223ENST00000475146 PPEF2O14830 753 aa26.03■■□□□ 1.76
CPNE1-223ENST00000475146 EXTL3O43909 919 aa26.03■■□□□ 1.76
CPNE1-223ENST00000475146 ZMYND10O75800 440 aa26.03■■□□□ 1.76
CPNE1-223ENST00000475146 NDUFA8P51970 172 aa26.03■■□□□ 1.76
CPNE1-223ENST00000475146 ARPP19P56211 112 aa26.03■■□□□ 1.76
CPNE1-223ENST00000475146 EHHADHQ08426 723 aa26.03■■□□□ 1.76
CPNE1-223ENST00000475146 CTXN3Q4LDR2 81 aa26.03■■□□□ 1.76
CPNE1-223ENST00000475146 DSTYKQ6XUX3 929 aa26.03■■□□□ 1.76
CPNE1-223ENST00000475146 EPM2AIP1Q7L775 607 aaPredicted RBP26.03■■□□□ 1.76
CPNE1-223ENST00000475146 NELFCDQ8IXH7 590 aa26.03■■□□□ 1.76
CPNE1-223ENST00000475146 TDRD5Q8NAT2 981 aaKnown RBP26.03■■□□□ 1.76
CPNE1-223ENST00000475146 SLC39A2Q9NP94 309 aa26.03■■□□□ 1.76
CPNE1-223ENST00000475146 BDP1A6H8Y1 2624 aa26.03■■□□□ 1.76
CPNE1-223ENST00000475146 UBE4BO95155 1302 aa26.03■■□□□ 1.76
CPNE1-223ENST00000475146 MTCL1Q9Y4B5 1905 aaKnown RBP26.02■■□□□ 1.76
CPNE1-223ENST00000475146 A0A1W2PQ27 194 aa26.02■■□□□ 1.76
CPNE1-223ENST00000475146 A0A1W2PQ64 194 aa26.02■■□□□ 1.76
CPNE1-223ENST00000475146 A0A1W2PQD8 194 aa26.02■■□□□ 1.76
CPNE1-223ENST00000475146 C2CD4DB7Z1M9 353 aa26.02■■□□□ 1.76
CPNE1-223ENST00000475146 C8AP07357 584 aa26.02■■□□□ 1.76
CPNE1-223ENST00000475146 HOXD13P35453 343 aa26.02■■□□□ 1.76
CPNE1-223ENST00000475146 PPM1LQ5SGD2 360 aa26.02■■□□□ 1.76
CPNE1-223ENST00000475146 C9orf57Q5W0N0 161 aa26.02■■□□□ 1.76
CPNE1-223ENST00000475146 ZNF280DQ6N043 979 aa26.02■■□□□ 1.76
CPNE1-223ENST00000475146 CYP26C1Q6V0L0 522 aa26.02■■□□□ 1.76
CPNE1-223ENST00000475146 EFCAB13Q8IY85 973 aa26.02■■□□□ 1.76
CPNE1-223ENST00000475146 GPD1LQ8N335 351 aa26.02■■□□□ 1.76
CPNE1-223ENST00000475146 ZNF507Q8TCN5 953 aa26.02■■□□□ 1.76
CPNE1-223ENST00000475146 EXOC1Q9NV70 894 aa26.02■■□□□ 1.76
CPNE1-223ENST00000475146 C2orf16Q68DN1 1984 aa26.02■■□□□ 1.76
CPNE1-223ENST00000475146 KIAA0391O15091 583 aaKnown RBP26.01■■□□□ 1.75
CPNE1-223ENST00000475146 AARSP49588 968 aaKnown RBP eCLIP26.01■■□□□ 1.75
CPNE1-223ENST00000475146 TFAMQ00059 246 aaKnown RBP26.01■■□□□ 1.75
CPNE1-223ENST00000475146 ROR1Q01973 937 aa26.01■■□□□ 1.75
CPNE1-223ENST00000475146 SLC7A14Q8TBB6 771 aa26.01■■□□□ 1.75
CPNE1-223ENST00000475146 SCFD1Q8WVM8 642 aa26.01■■□□□ 1.75
CPNE1-223ENST00000475146 ZNF707Q96C28 371 aaPredicted RBP26.01■■□□□ 1.75
CPNE1-223ENST00000475146 PRKD2Q9BZL6 878 aa26.01■■□□□ 1.75
CPNE1-223ENST00000475146 DPP3Q9NY33 737 aa26.01■■□□□ 1.75
CPNE1-223ENST00000475146 FBXL5Q9UKA1 691 aa26.01■■□□□ 1.75
CPNE1-223ENST00000475146 TIMM13Q9Y5L4 95 aaPredicted RBP26.01■■□□□ 1.75
CPNE1-223ENST00000475146 MUC3AQ02505 3323 aa26.01■■□□□ 1.75
CPNE1-223ENST00000475146 FAM237AA0A1B0GTK4 181 aa26■■□□□ 1.75
CPNE1-223ENST00000475146 FAM86C2PA6NEL3 165 aa26■■□□□ 1.75
CPNE1-223ENST00000475146 M0QZQ0 153 aa26■■□□□ 1.75
CPNE1-223ENST00000475146 WNT7BP56706 349 aa26■■□□□ 1.75
CPNE1-223ENST00000475146 YWHAHQ04917 246 aaPredicted RBP26■■□□□ 1.75
CPNE1-223ENST00000475146 MRPL58Q14197 206 aaKnown RBP26■■□□□ 1.75
CPNE1-223ENST00000475146 SLC8B1Q6J4K2 584 aa26■■□□□ 1.75
CPNE1-223ENST00000475146 USP37Q86T82 979 aa26■■□□□ 1.75
CPNE1-223ENST00000475146 NT5DC4Q86YG4 428 aa26■■□□□ 1.75
CPNE1-223ENST00000475146 RHOBTB2Q9BYZ6 727 aa26■■□□□ 1.75
CPNE1-223ENST00000475146 GOLPH3LQ9H4A5 285 aa26■■□□□ 1.75
CPNE1-223ENST00000475146 C5orf42Q9H799 3197 aa26■■□□□ 1.75
CPNE1-223ENST00000475146 DENND4AQ7Z401 1863 aa26■■□□□ 1.75
CPNE1-223ENST00000475146 CLUHO75153 1309 aa25.99■■□□□ 1.75
CPNE1-223ENST00000475146 ANO9A1A5B4 782 aa25.99■■□□□ 1.75
CPNE1-223ENST00000475146 PIRO00625 290 aa25.99■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms