RNA–Protein interactions for RNA: ENST00000455362.1

HMGB1P4-201, Transcript of high mobility group box 1 pseudogene 4, humanhuman

BASIC

Gene HMGB1P4, Length 567 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P4-201ENST00000455362 GPR85P60893 370 aa5.77□□□□□ -1.49
HMGB1P4-201ENST00000455362 RNF4P78317 190 aa5.77□□□□□ -1.49
HMGB1P4-201ENST00000455362 KRT76Q01546 638 aa5.77□□□□□ -1.49
HMGB1P4-201ENST00000455362 IKQ13123 557 aaPredicted RBP5.77□□□□□ -1.49
HMGB1P4-201ENST00000455362 VGLL4Q14135 290 aa5.77□□□□□ -1.49
HMGB1P4-201ENST00000455362 QRICH1Q2TAL8 776 aa5.77□□□□□ -1.49
HMGB1P4-201ENST00000455362 TUBB8Q3ZCM7 444 aa5.77□□□□□ -1.49
HMGB1P4-201ENST00000455362 ZBTB37Q5TC79 503 aa5.77□□□□□ -1.49
HMGB1P4-201ENST00000455362 DARS2Q6PI48 645 aaKnown RBP5.77□□□□□ -1.49
HMGB1P4-201ENST00000455362 IGF2-ASQ6U949 168 aa5.77□□□□□ -1.49
HMGB1P4-201ENST00000455362 FAM43BQ6ZT52 329 aaPredicted RBP5.77□□□□□ -1.49
HMGB1P4-201ENST00000455362 MOB2Q70IA6 237 aa5.77□□□□□ -1.49
HMGB1P4-201ENST00000455362 FAM160B2Q86V87 743 aa5.77□□□□□ -1.49
HMGB1P4-201ENST00000455362 LDHDQ86WU2 507 aa5.77□□□□□ -1.49
HMGB1P4-201ENST00000455362 BLIDQ8IZY5 108 aa5.77□□□□□ -1.49
HMGB1P4-201ENST00000455362 EFHBQ8N7U6 833 aa5.77□□□□□ -1.49
HMGB1P4-201ENST00000455362 ZNF713Q8N859 430 aaPredicted RBP5.77□□□□□ -1.49
HMGB1P4-201ENST00000455362 DAGLBQ8NCG7 672 aa5.77□□□□□ -1.49
HMGB1P4-201ENST00000455362 NAXEQ8NCW5 288 aa5.77□□□□□ -1.49
HMGB1P4-201ENST00000455362 CCDC148Q8NFR7 591 aa5.77□□□□□ -1.49
HMGB1P4-201ENST00000455362 DIS3LQ8TF46 1054 aaKnown RBP5.77□□□□□ -1.49
HMGB1P4-201ENST00000455362 CCDC12Q8WUD4 166 aaPredicted RBP5.77□□□□□ -1.49
HMGB1P4-201ENST00000455362 COA7Q96BR5 231 aa5.77□□□□□ -1.49
HMGB1P4-201ENST00000455362 C1orf159Q96HA4 380 aa5.77□□□□□ -1.49
HMGB1P4-201ENST00000455362 USP28Q96RU2 1077 aa5.77□□□□□ -1.49
HMGB1P4-201ENST00000455362 ZFYVE21Q9BQ24 234 aa5.77□□□□□ -1.49
HMGB1P4-201ENST00000455362 CELF4Q9BZC1 486 aaKnown RBP5.77□□□□□ -1.49
HMGB1P4-201ENST00000455362 ZMYND12Q9H0C1 365 aa5.77□□□□□ -1.49
HMGB1P4-201ENST00000455362 MYLK2Q9H1R3 596 aa5.77□□□□□ -1.49
HMGB1P4-201ENST00000455362 RSPH9Q9H1X1 276 aaPredicted RBP5.77□□□□□ -1.49
HMGB1P4-201ENST00000455362 OXSMQ9NWU1 459 aa5.77□□□□□ -1.49
HMGB1P4-201ENST00000455362 RTEL1Q9NZ71 1219 aa5.77□□□□□ -1.49
HMGB1P4-201ENST00000455362 DIS3Q9Y2L1 958 aaKnown RBP5.77□□□□□ -1.49
HMGB1P4-201ENST00000455362 GPR55Q9Y2T6 319 aaPredicted RBP5.77□□□□□ -1.49
HMGB1P4-201ENST00000455362 NOC2LQ9Y3T9 749 aaKnown RBP5.77□□□□□ -1.49
HMGB1P4-201ENST00000455362 PTPRFP10586 1907 aa5.77□□□□□ -1.49
HMGB1P4-201ENST00000455362 RLFQ13129 1914 aa5.77□□□□□ -1.49
HMGB1P4-201ENST00000455362 PAPPA2Q9BXP8 1791 aa5.77□□□□□ -1.49
HMGB1P4-201ENST00000455362 OTOFQ9HC10 1997 aa5.76□□□□□ -1.49
HMGB1P4-201ENST00000455362 ELP1O95163 1332 aa5.76□□□□□ -1.49
HMGB1P4-201ENST00000455362 LRRC10BA6NIK2 292 aa5.76□□□□□ -1.49
HMGB1P4-201ENST00000455362 RASA4BC9J798 803 aa5.76□□□□□ -1.49
HMGB1P4-201ENST00000455362 FAM227AF5H4B4 570 aa5.76□□□□□ -1.49
HMGB1P4-201ENST00000455362 ARVCFO00192 962 aa5.76□□□□□ -1.49
HMGB1P4-201ENST00000455362 RASA4O43374 803 aa5.76□□□□□ -1.49
HMGB1P4-201ENST00000455362 RRM1P23921 792 aa5.76□□□□□ -1.49
HMGB1P4-201ENST00000455362 GNA11P29992 359 aa5.76□□□□□ -1.49
HMGB1P4-201ENST00000455362 GMPRP36959 345 aa5.76□□□□□ -1.49
HMGB1P4-201ENST00000455362 MRPL12P52815 198 aaKnown RBP5.76□□□□□ -1.49
HMGB1P4-201ENST00000455362 HMGCS2P54868 508 aa5.76□□□□□ -1.49
HMGB1P4-201ENST00000455362 SNAP25P60880 206 aa5.76□□□□□ -1.49
HMGB1P4-201ENST00000455362 ERVK-24P63145 666 aa5.76□□□□□ -1.49
HMGB1P4-201ENST00000455362 AMPD2Q01433 879 aa5.76□□□□□ -1.49
HMGB1P4-201ENST00000455362 TNFAIP2Q03169 654 aa5.76□□□□□ -1.49
HMGB1P4-201ENST00000455362 CEBPZQ03701 1054 aaKnown RBP5.76□□□□□ -1.49
HMGB1P4-201ENST00000455362 PAK1Q13153 545 aa5.76□□□□□ -1.49
HMGB1P4-201ENST00000455362 SUZ12Q15022 739 aaKnown RBP5.76□□□□□ -1.49
HMGB1P4-201ENST00000455362 SLC39A14Q15043 492 aa5.76□□□□□ -1.49
HMGB1P4-201ENST00000455362 CDC37Q16543 378 aaPredicted RBP5.76□□□□□ -1.49
HMGB1P4-201ENST00000455362 RILPL1Q5EBL4 403 aa5.76□□□□□ -1.49
HMGB1P4-201ENST00000455362 FAM47CQ5HY64 1035 aa5.76□□□□□ -1.49
HMGB1P4-201ENST00000455362 EARS2Q5JPH6 523 aaKnown RBP5.76□□□□□ -1.49
HMGB1P4-201ENST00000455362 ATAT1Q5SQI0 421 aa5.76□□□□□ -1.49
HMGB1P4-201ENST00000455362 CFAP161Q6P656 301 aa5.76□□□□□ -1.49
HMGB1P4-201ENST00000455362 TXNDC11Q6PKC3 985 aa5.76□□□□□ -1.49
HMGB1P4-201ENST00000455362 ARMC9Q7Z3E5 817 aa5.76□□□□□ -1.49
HMGB1P4-201ENST00000455362 FBXO11Q86XK2 927 aa5.76□□□□□ -1.49
HMGB1P4-201ENST00000455362 PTRH1Q86Y79 214 aaKnown RBP5.76□□□□□ -1.49
HMGB1P4-201ENST00000455362 ERO1BQ86YB8 467 aa5.76□□□□□ -1.49
HMGB1P4-201ENST00000455362 WFDC8Q8IUA0 241 aa5.76□□□□□ -1.49
HMGB1P4-201ENST00000455362 MAP4K3Q8IVH8 894 aa5.76□□□□□ -1.49
HMGB1P4-201ENST00000455362 MYCT1Q8N699 235 aa5.76□□□□□ -1.49
HMGB1P4-201ENST00000455362 C2orf69Q8N8R5 385 aa5.76□□□□□ -1.49
HMGB1P4-201ENST00000455362 BICD2Q8TD16 824 aa5.76□□□□□ -1.49
HMGB1P4-201ENST00000455362 HPS3Q969F9 1004 aa5.76□□□□□ -1.49
HMGB1P4-201ENST00000455362 CLMNQ96JQ2 1002 aa5.76□□□□□ -1.49
HMGB1P4-201ENST00000455362 C12orf42Q96LP6 360 aa5.76□□□□□ -1.49
HMGB1P4-201ENST00000455362 APOL5Q9BWW9 433 aa5.76□□□□□ -1.49
HMGB1P4-201ENST00000455362 AMNQ9BXJ7 453 aa5.76□□□□□ -1.49
HMGB1P4-201ENST00000455362 FTOQ9C0B1 505 aaKnown RBP eCLIP5.76□□□□□ -1.49
HMGB1P4-201ENST00000455362 WDR12Q9GZL7 423 aaKnown RBP5.76□□□□□ -1.49
HMGB1P4-201ENST00000455362 VPS11Q9H270 941 aa5.76□□□□□ -1.49
HMGB1P4-201ENST00000455362 RANBP17Q9H2T7 1088 aaKnown RBP5.76□□□□□ -1.49
HMGB1P4-201ENST00000455362 C6orf50Q9HD87 102 aa5.76□□□□□ -1.49
HMGB1P4-201ENST00000455362 RIC8AQ9NPQ8 531 aa5.76□□□□□ -1.49
HMGB1P4-201ENST00000455362 PRDM6Q9NQX0 595 aa5.76□□□□□ -1.49
HMGB1P4-201ENST00000455362 FBXO28Q9NVF7 368 aa5.76□□□□□ -1.49
HMGB1P4-201ENST00000455362 RRN3Q9NYV6 651 aa5.76□□□□□ -1.49
HMGB1P4-201ENST00000455362 H2AFY2Q9P0M6 372 aaPredicted RBP5.76□□□□□ -1.49
HMGB1P4-201ENST00000455362 GDF2Q9UK05 429 aaPredicted RBP5.76□□□□□ -1.49
HMGB1P4-201ENST00000455362 PCDHA6Q9UN73 950 aa5.76□□□□□ -1.49
HMGB1P4-201ENST00000455362 PCDHB12Q9Y5F1 795 aa5.76□□□□□ -1.49
HMGB1P4-201ENST00000455362 PCDHA1Q9Y5I3 950 aa5.76□□□□□ -1.49
HMGB1P4-201ENST00000455362 FHOD1Q9Y613 1164 aa5.76□□□□□ -1.49
HMGB1P4-201ENST00000455362 CLIC4Q9Y696 253 aa5.76□□□□□ -1.49
HMGB1P4-201ENST00000455362 PARP14Q460N5 1801 aa5.76□□□□□ -1.49
HMGB1P4-201ENST00000455362 MYH7BA7E2Y1 1941 aa5.76□□□□□ -1.49
HMGB1P4-201ENST00000455362 TRPM7Q96QT4 1865 aa5.75□□□□□ -1.49
HMGB1P4-201ENST00000455362 CXCL11O14625 94 aa5.75□□□□□ -1.49
HMGB1P4-201ENST00000455362 SHOXO15266 292 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms