RNA–Protein interactions for RNA: ENST00000449116.6

SHANK2-210, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 939 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-210ENST00000449116 SYCP1Q15431 976 aa15.76■□□□□ 0.11
SHANK2-210ENST00000449116 UPP1Q16831 310 aa15.76■□□□□ 0.11
SHANK2-210ENST00000449116 SGSM1Q2NKQ1 1148 aa15.76■□□□□ 0.11
SHANK2-210ENST00000449116 SCARA3Q6AZY7 606 aa15.76■□□□□ 0.11
SHANK2-210ENST00000449116 LRRC52Q8N7C0 313 aa15.76■□□□□ 0.11
SHANK2-210ENST00000449116 LMO3Q8TAP4 145 aa15.76■□□□□ 0.11
SHANK2-210ENST00000449116 TAF4BQ92750 862 aa15.76■□□□□ 0.11
SHANK2-210ENST00000449116 SEMA4DQ92854 862 aa15.76■□□□□ 0.11
SHANK2-210ENST00000449116 MRFAP1L1Q96HT8 127 aa15.76■□□□□ 0.11
SHANK2-210ENST00000449116 ZNF560Q96MR9 790 aa15.76■□□□□ 0.11
SHANK2-210ENST00000449116 RAD9AQ99638 391 aa15.76■□□□□ 0.11
SHANK2-210ENST00000449116 IMPG2Q9BZV3 1241 aa15.76■□□□□ 0.11
SHANK2-210ENST00000449116 INTS2Q9H0H0 1204 aaKnown RBP15.76■□□□□ 0.11
SHANK2-210ENST00000449116 TNRC18O15417 2968 aaPredicted RBP15.75■□□□□ 0.11
SHANK2-210ENST00000449116 PPEF2O14830 753 aa15.75■□□□□ 0.11
SHANK2-210ENST00000449116 TLL1O43897 1013 aa15.75■□□□□ 0.11
SHANK2-210ENST00000449116 ZC3H11AO75152 810 aaKnown RBP eCLIP15.75■□□□□ 0.11
SHANK2-210ENST00000449116 CLSTN1O94985 981 aa15.75■□□□□ 0.11
SHANK2-210ENST00000449116 STAU1O95793 577 aaKnown RBP15.75■□□□□ 0.11
SHANK2-210ENST00000449116 ASS1P00966 412 aaKnown RBP15.75■□□□□ 0.11
SHANK2-210ENST00000449116 SLC9A1P19634 815 aa15.75■□□□□ 0.11
SHANK2-210ENST00000449116 PON1P27169 355 aa15.75■□□□□ 0.11
SHANK2-210ENST00000449116 PBX1P40424 430 aa15.75■□□□□ 0.11
SHANK2-210ENST00000449116 PNPLA4P41247 253 aa15.75■□□□□ 0.11
SHANK2-210ENST00000449116 TAF6P49848 677 aa15.75■□□□□ 0.11
SHANK2-210ENST00000449116 MYL6P60660 151 aa15.75■□□□□ 0.11
SHANK2-210ENST00000449116 MYO1EQ12965 1108 aa15.75■□□□□ 0.11
SHANK2-210ENST00000449116 ZNF699Q32M78 642 aa15.75■□□□□ 0.11
SHANK2-210ENST00000449116 WDR44Q5JSH3 913 aa15.75■□□□□ 0.11
SHANK2-210ENST00000449116 TRIM65Q6PJ69 517 aa15.75■□□□□ 0.11
SHANK2-210ENST00000449116 SP7Q8TDD2 431 aaPredicted RBP15.75■□□□□ 0.11
SHANK2-210ENST00000449116 HPDLQ96IR7 371 aa15.75■□□□□ 0.11
SHANK2-210ENST00000449116 PCMTD1Q96MG8 357 aaPredicted RBP15.75■□□□□ 0.11
SHANK2-210ENST00000449116 PAAF1Q9BRP4 392 aa15.75■□□□□ 0.11
SHANK2-210ENST00000449116 LSM14BQ9BX40 385 aaKnown RBP15.75■□□□□ 0.11
SHANK2-210ENST00000449116 XYLT2Q9H1B5 865 aa15.75■□□□□ 0.11
SHANK2-210ENST00000449116 CWH43Q9H720 699 aa15.75■□□□□ 0.11
SHANK2-210ENST00000449116 VRTNQ9H8Y1 702 aa15.75■□□□□ 0.11
SHANK2-210ENST00000449116 HCSTQ9UBK5 93 aa15.75■□□□□ 0.11
SHANK2-210ENST00000449116 CACNG4Q9UBN1 327 aa15.75■□□□□ 0.11
SHANK2-210ENST00000449116 DNAJB4Q9UDY4 337 aa15.75■□□□□ 0.11
SHANK2-210ENST00000449116 SIK3Q9Y2K2 1263 aa15.75■□□□□ 0.11
SHANK2-210ENST00000449116 LRRN2O75325 713 aa15.74■□□□□ 0.11
SHANK2-210ENST00000449116 ADCY5O95622 1261 aa15.74■□□□□ 0.11
SHANK2-210ENST00000449116 ALDH2P05091 517 aa15.74■□□□□ 0.11
SHANK2-210ENST00000449116 OR1G1P47890 313 aa15.74■□□□□ 0.11
SHANK2-210ENST00000449116 NOP14P78316 857 aaKnown RBP15.74■□□□□ 0.11
SHANK2-210ENST00000449116 PTPN21Q16825 1174 aa15.74■□□□□ 0.11
SHANK2-210ENST00000449116 SV2CQ496J9 727 aa15.74■□□□□ 0.11
SHANK2-210ENST00000449116 DCLRE1AQ6PJP8 1040 aa15.74■□□□□ 0.11
SHANK2-210ENST00000449116 VSTM4Q8IW00 320 aa15.74■□□□□ 0.11
SHANK2-210ENST00000449116 FIBCD1Q8N539 461 aa15.74■□□□□ 0.11
SHANK2-210ENST00000449116 PI4K2AQ9BTU6 479 aa15.74■□□□□ 0.11
SHANK2-210ENST00000449116 PLCB1Q9NQ66 1216 aa15.74■□□□□ 0.11
SHANK2-210ENST00000449116 MRPL42Q9Y6G3 142 aaKnown RBP15.74■□□□□ 0.11
SHANK2-210ENST00000449116 CARNS1A5YM72 827 aa15.73■□□□□ 0.11
SHANK2-210ENST00000449116 TMEM189-UBE2V1I3L0A0 370 aa15.73■□□□□ 0.11
SHANK2-210ENST00000449116 NRP1O14786 923 aa15.73■□□□□ 0.11
SHANK2-210ENST00000449116 B3GAT3O94766 335 aa15.73■□□□□ 0.11
SHANK2-210ENST00000449116 GALTP07902 379 aa15.73■□□□□ 0.11
SHANK2-210ENST00000449116 LAG3P18627 525 aa15.73■□□□□ 0.11
SHANK2-210ENST00000449116 PAX3P23760 479 aa15.73■□□□□ 0.11
SHANK2-210ENST00000449116 SLC11A1P49279 550 aa15.73■□□□□ 0.11
SHANK2-210ENST00000449116 KLK7P49862 253 aa15.73■□□□□ 0.11
SHANK2-210ENST00000449116 BCAR1P56945 870 aa15.73■□□□□ 0.11
SHANK2-210ENST00000449116 LILRA4P59901 499 aa15.73■□□□□ 0.11
SHANK2-210ENST00000449116 LRMPQ12912 555 aa15.73■□□□□ 0.11
SHANK2-210ENST00000449116 ZNF667Q5HYK9 610 aa15.73■□□□□ 0.11
SHANK2-210ENST00000449116 SPOUT1Q5T280 376 aaKnown RBP15.73■□□□□ 0.11
SHANK2-210ENST00000449116 SPOPLQ6IQ16 392 aa15.73■□□□□ 0.11
SHANK2-210ENST00000449116 TDHQ8IZJ6 230 aa15.73■□□□□ 0.11
SHANK2-210ENST00000449116 C3orf58Q8NDZ4 430 aa15.73■□□□□ 0.11
SHANK2-210ENST00000449116 RABGGTAQ92696 567 aa15.73■□□□□ 0.11
SHANK2-210ENST00000449116 NT5C1BQ96P26 610 aa15.73■□□□□ 0.11
SHANK2-210ENST00000449116 COLEC11Q9BWP8 271 aa15.73■□□□□ 0.11
SHANK2-210ENST00000449116 APOBEC3GQ9HC16 384 aaKnown RBP15.73■□□□□ 0.11
SHANK2-210ENST00000449116 SIX2Q9NPC8 291 aa15.73■□□□□ 0.11
SHANK2-210ENST00000449116 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.73■□□□□ 0.11
SHANK2-210ENST00000449116 APEX2Q9UBZ4 518 aa15.73■□□□□ 0.11
SHANK2-210ENST00000449116 FAN1Q9Y2M0 1017 aa15.73■□□□□ 0.11
SHANK2-210ENST00000449116 PRG3Q9Y2Y8 225 aaPredicted RBP15.73■□□□□ 0.11
SHANK2-210ENST00000449116 ITIH6Q6UXX5 1313 aa15.72■□□□□ 0.11
SHANK2-210ENST00000449116 GRXCR1A8MXD5 290 aa15.72■□□□□ 0.11
SHANK2-210ENST00000449116 KPNA7A9QM74 516 aa15.72■□□□□ 0.11
SHANK2-210ENST00000449116 KIF4AO95239 1232 aa15.72■□□□□ 0.11
SHANK2-210ENST00000449116 P4HA1P13674 534 aa15.72■□□□□ 0.11
SHANK2-210ENST00000449116 ALDH7A1P49419 539 aaKnown RBP15.72■□□□□ 0.11
SHANK2-210ENST00000449116 RABGGTBP53611 331 aa15.72■□□□□ 0.11
SHANK2-210ENST00000449116 WDR72Q3MJ13 1102 aa15.72■□□□□ 0.11
SHANK2-210ENST00000449116 KLHDC7AQ5VTJ3 777 aa15.72■□□□□ 0.11
SHANK2-210ENST00000449116 SPECC1LQ69YQ0 1117 aa15.72■□□□□ 0.11
SHANK2-210ENST00000449116 FAM109BQ6ICB4 259 aaPredicted RBP15.72■□□□□ 0.11
SHANK2-210ENST00000449116 DPY19L2P1Q6NXN4 242 aa15.72■□□□□ 0.11
SHANK2-210ENST00000449116 NEK11Q8NG66 645 aa15.72■□□□□ 0.11
SHANK2-210ENST00000449116 ELMO3Q96BJ8 720 aa15.72■□□□□ 0.11
SHANK2-210ENST00000449116 FAXDC2Q96IV6 333 aa15.72■□□□□ 0.11
SHANK2-210ENST00000449116 ZNF558Q96NG5 402 aa15.72■□□□□ 0.11
SHANK2-210ENST00000449116 FAM207AQ9NSI2 230 aaPredicted RBP15.72■□□□□ 0.11
SHANK2-210ENST00000449116 MARCH5Q9NX47 278 aa15.72■□□□□ 0.11
SHANK2-210ENST00000449116 NUB1Q9Y5A7 615 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms