RNA–Protein interactions for RNA: ENST00000445902.2

VPS52-212, Transcript of VPS52, GARP complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS52, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-212ENST00000445902 TIPINQ9BVW5 301 aa14.79□□□□□ -0.04
VPS52-212ENST00000445902 LNPEPQ9UIQ6 1025 aa14.79□□□□□ -0.04
VPS52-212ENST00000445902 C2CD2LO14523 706 aa14.79□□□□□ -0.04
VPS52-212ENST00000445902 LDHCP07864 332 aa14.79□□□□□ -0.04
VPS52-212ENST00000445902 ZSCAN5DPP0CG00 497 aa14.79□□□□□ -0.04
VPS52-212ENST00000445902 RALAP11233 206 aa14.79□□□□□ -0.04
VPS52-212ENST00000445902 KRT4P19013 534 aa14.79□□□□□ -0.04
VPS52-212ENST00000445902 NT5C2P49902 561 aa14.79□□□□□ -0.04
VPS52-212ENST00000445902 SCNN1BP51168 640 aa14.79□□□□□ -0.04
VPS52-212ENST00000445902 SLCO2A1Q92959 643 aa14.79□□□□□ -0.04
VPS52-212ENST00000445902 ZNF184Q99676 751 aaPredicted RBP14.79□□□□□ -0.04
VPS52-212ENST00000445902 OLFML3Q9NRN5 406 aa14.79□□□□□ -0.04
VPS52-212ENST00000445902 ARMCX1Q9P291 453 aa14.79□□□□□ -0.04
VPS52-212ENST00000445902 LYNP07948 512 aa14.79□□□□□ -0.04
VPS52-212ENST00000445902 POTEJP0CG39 1038 aa14.79□□□□□ -0.04
VPS52-212ENST00000445902 BMP3P12645 472 aa14.79□□□□□ -0.04
VPS52-212ENST00000445902 FMO1Q01740 532 aa14.79□□□□□ -0.04
VPS52-212ENST00000445902 AP1B1Q10567 949 aa14.79□□□□□ -0.04
VPS52-212ENST00000445902 MDH1BQ5I0G3 518 aa14.79□□□□□ -0.04
VPS52-212ENST00000445902 ODR4Q5SWX8 454 aa14.79□□□□□ -0.04
VPS52-212ENST00000445902 ATL2Q8NHH9 583 aa14.79□□□□□ -0.04
VPS52-212ENST00000445902 SH3TC2Q8TF17 1288 aa14.79□□□□□ -0.04
VPS52-212ENST00000445902 PARVGQ9HBI0 331 aa14.79□□□□□ -0.04
VPS52-212ENST00000445902 KLHL11Q9NVR0 708 aa14.79□□□□□ -0.04
VPS52-212ENST00000445902 NOCTQ9UK39 431 aaKnown RBP14.79□□□□□ -0.04
VPS52-212ENST00000445902 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.79□□□□□ -0.04
VPS52-212ENST00000445902 MSH4O15457 936 aa14.78□□□□□ -0.04
VPS52-212ENST00000445902 SNHG28P0DPA3 235 aa14.78□□□□□ -0.04
VPS52-212ENST00000445902 ETS1P14921 441 aa14.78□□□□□ -0.04
VPS52-212ENST00000445902 MAPK4P31152 587 aa14.78□□□□□ -0.04
VPS52-212ENST00000445902 HOXA13P31271 388 aaPredicted RBP14.78□□□□□ -0.04
VPS52-212ENST00000445902 DYNC1I2Q13409 638 aaKnown RBP14.78□□□□□ -0.04
VPS52-212ENST00000445902 EFTUD2Q15029 972 aaKnown RBP eCLIP14.78□□□□□ -0.041e-6■■■■□ 22.8
VPS52-212ENST00000445902 IZUMO2Q6UXV1 221 aa14.78□□□□□ -0.04
VPS52-212ENST00000445902 GRK7Q8WTQ7 553 aa14.78□□□□□ -0.04
VPS52-212ENST00000445902 PTPRN2Q92932 1015 aa14.78□□□□□ -0.04
VPS52-212ENST00000445902 FAM161BQ96MY7 647 aa14.78□□□□□ -0.04
VPS52-212ENST00000445902 SYNCQ9H7C4 482 aa14.78□□□□□ -0.04
VPS52-212ENST00000445902 SMCHD1A6NHR9 2005 aa14.78□□□□□ -0.04
VPS52-212ENST00000445902 GOLGA8SH3BPF8 625 aa14.78□□□□□ -0.04
VPS52-212ENST00000445902 GOLGA8MH3BSY2 632 aa14.78□□□□□ -0.04
VPS52-212ENST00000445902 USP1O94782 785 aa14.78□□□□□ -0.04
VPS52-212ENST00000445902 RTP1P59025 263 aa14.78□□□□□ -0.04
VPS52-212ENST00000445902 NOP14P78316 857 aaKnown RBP14.78□□□□□ -0.04
VPS52-212ENST00000445902 NR1H3Q13133 447 aa14.78□□□□□ -0.04
VPS52-212ENST00000445902 NFIXQ14938 502 aa14.78□□□□□ -0.04
VPS52-212ENST00000445902 ZRSR2Q15696 482 aaKnown RBP14.78□□□□□ -0.04
VPS52-212ENST00000445902 SEPT7Q16181 437 aaKnown RBP14.78□□□□□ -0.04
VPS52-212ENST00000445902 LRRC6Q86X45 466 aa14.78□□□□□ -0.04
VPS52-212ENST00000445902 LENG9Q96B70 501 aa14.78□□□□□ -0.04
VPS52-212ENST00000445902 PLVAPQ9BX97 442 aa14.78□□□□□ -0.04
VPS52-212ENST00000445902 TMX4Q9H1E5 349 aaPredicted RBP14.78□□□□□ -0.04
VPS52-212ENST00000445902 CYLDQ9NQC7 956 aa14.78□□□□□ -0.04
VPS52-212ENST00000445902 TAS2R1Q9NYW7 299 aa14.78□□□□□ -0.04
VPS52-212ENST00000445902 PRPF4O43172 522 aaKnown RBP eCLIP14.77□□□□□ -0.041e-6■■■■■ 32.4
VPS52-212ENST00000445902 BAG2O95816 211 aa14.77□□□□□ -0.04
VPS52-212ENST00000445902 TROVE2P10155 538 aaKnown RBP eCLIP14.77□□□□□ -0.04
VPS52-212ENST00000445902 ANKMY2Q8IV38 441 aa14.77□□□□□ -0.04
VPS52-212ENST00000445902 DHX38Q92620 1227 aaKnown RBP14.77□□□□□ -0.04
VPS52-212ENST00000445902 PTCD3Q96EY7 689 aaKnown RBP14.77□□□□□ -0.04
VPS52-212ENST00000445902 MKNK1Q9BUB5 465 aa14.77□□□□□ -0.04
VPS52-212ENST00000445902 DMAP1Q9NPF5 467 aaPredicted RBP14.77□□□□□ -0.04
VPS52-212ENST00000445902 ANKFY1Q9P2R3 1169 aa14.77□□□□□ -0.04
VPS52-212ENST00000445902 hCG_2014768A0A024R1R8 64 aa14.77□□□□□ -0.05
VPS52-212ENST00000445902 MEIS2O14770 477 aa14.77□□□□□ -0.05
VPS52-212ENST00000445902 EIF3DO15371 548 aaKnown RBP eCLIP14.77□□□□□ -0.05
VPS52-212ENST00000445902 CYP1A2P05177 515 aa14.77□□□□□ -0.05
VPS52-212ENST00000445902 GAP43P17677 238 aa14.77□□□□□ -0.05
VPS52-212ENST00000445902 CAV1Q03135 178 aa14.77□□□□□ -0.05
VPS52-212ENST00000445902 RASA3Q14644 834 aa14.77□□□□□ -0.05
VPS52-212ENST00000445902 ZNF720Q7Z2F6 126 aa14.77□□□□□ -0.05
VPS52-212ENST00000445902 TRIM74Q86UV6 250 aa14.77□□□□□ -0.05
VPS52-212ENST00000445902 TRIM73Q86UV7 250 aa14.77□□□□□ -0.05
VPS52-212ENST00000445902 FBXO27Q8NI29 283 aa14.77□□□□□ -0.05
VPS52-212ENST00000445902 MORC4Q8TE76 937 aa14.77□□□□□ -0.05
VPS52-212ENST00000445902 CLPTM1LQ96KA5 538 aa14.77□□□□□ -0.05
VPS52-212ENST00000445902 CFAP57Q96MR6 1250 aa14.77□□□□□ -0.05
VPS52-212ENST00000445902 TTC1Q99614 292 aa14.77□□□□□ -0.05
VPS52-212ENST00000445902 NAP1L4Q99733 375 aaKnown RBP14.77□□□□□ -0.05
VPS52-212ENST00000445902 FHDC1Q9C0D6 1143 aaPredicted RBP14.77□□□□□ -0.05
VPS52-212ENST00000445902 SAR1AQ9NR31 198 aa14.77□□□□□ -0.05
VPS52-212ENST00000445902 STRCP1A6NGW2 1772 aa14.76□□□□□ -0.05
VPS52-212ENST00000445902 CREB3O43889 395 aa14.76□□□□□ -0.05
VPS52-212ENST00000445902 MTA2O94776 668 aa14.76□□□□□ -0.05
VPS52-212ENST00000445902 ESRRAP11474 423 aaPredicted RBP14.76□□□□□ -0.05
VPS52-212ENST00000445902 CD58P19256 250 aa14.76□□□□□ -0.05
VPS52-212ENST00000445902 ZNF76P36508 570 aa14.76□□□□□ -0.05
VPS52-212ENST00000445902 CCNFP41002 786 aa14.76□□□□□ -0.05
VPS52-212ENST00000445902 RHBDL3P58872 404 aa14.76□□□□□ -0.05
VPS52-212ENST00000445902 LRRC36Q1X8D7 754 aa14.76□□□□□ -0.05
VPS52-212ENST00000445902 SHROOM1Q2M3G4 852 aaPredicted RBP14.76□□□□□ -0.05
VPS52-212ENST00000445902 CFAP157Q5JU67 520 aa14.76□□□□□ -0.05
VPS52-212ENST00000445902 ZBED8Q8IZ13 594 aa14.76□□□□□ -0.05
VPS52-212ENST00000445902 TAB3Q8N5C8 712 aaPredicted RBP14.76□□□□□ -0.05
VPS52-212ENST00000445902 NSL1Q96IY1 281 aa14.76□□□□□ -0.05
VPS52-212ENST00000445902 KREMEN1Q96MU8 473 aa14.76□□□□□ -0.05
VPS52-212ENST00000445902 PDP2Q9P2J9 529 aa14.76□□□□□ -0.05
VPS52-212ENST00000445902 SLC17A7Q9P2U7 560 aa14.76□□□□□ -0.05
VPS52-212ENST00000445902 STX18Q9P2W9 335 aaKnown RBP14.76□□□□□ -0.05
VPS52-212ENST00000445902 GTF3C4Q9UKN8 822 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms