RNA–Protein interactions for RNA: ENST00000444502.5

TOP3B-210, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 4,163 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-210ENST00000444502 PCSK1NQ9UHG2 260 aa11.23□□□□□ -0.61
TOP3B-210ENST00000444502 ASTN1O14525 1302 aa11.23□□□□□ -0.61
TOP3B-210ENST00000444502 TOGARAM1Q9Y4F4 1720 aa11.23□□□□□ -0.61
TOP3B-210ENST00000444502 A6NNZ2 444 aa11.22□□□□□ -0.61
TOP3B-210ENST00000444502 DIAPH2O60879 1101 aa11.22□□□□□ -0.61
TOP3B-210ENST00000444502 PDHA1P08559 390 aa11.22□□□□□ -0.61
TOP3B-210ENST00000444502 WEE2P0C1S8 567 aa11.22□□□□□ -0.61
TOP3B-210ENST00000444502 KRT15P19012 456 aa11.22□□□□□ -0.61
TOP3B-210ENST00000444502 GNA15P30679 374 aa11.22□□□□□ -0.61
TOP3B-210ENST00000444502 DLG4P78352 724 aa11.22□□□□□ -0.61
TOP3B-210ENST00000444502 USP4Q13107 963 aa11.22□□□□□ -0.61
TOP3B-210ENST00000444502 TUBB8Q3ZCM7 444 aa11.22□□□□□ -0.61
TOP3B-210ENST00000444502 DHX38Q92620 1227 aaKnown RBP11.22□□□□□ -0.61
TOP3B-210ENST00000444502 ANKEF1Q9NU02 776 aa11.22□□□□□ -0.61
TOP3B-210ENST00000444502 MIF4GDA9UHW6 222 aaKnown RBP11.22□□□□□ -0.61
TOP3B-210ENST00000444502 MAGEB2O15479 319 aa11.22□□□□□ -0.61
TOP3B-210ENST00000444502 ATP9AO75110 1047 aa11.22□□□□□ -0.61
TOP3B-210ENST00000444502 STK10O94804 968 aaKnown RBP11.22□□□□□ -0.61
TOP3B-210ENST00000444502 CYP3A4P08684 503 aa11.22□□□□□ -0.61
TOP3B-210ENST00000444502 COMTP21964 271 aa11.22□□□□□ -0.61
TOP3B-210ENST00000444502 PPP2R5CQ13362 524 aa11.22□□□□□ -0.61
TOP3B-210ENST00000444502 ZRSR2Q15696 482 aaKnown RBP11.22□□□□□ -0.61
TOP3B-210ENST00000444502 OSMRQ99650 979 aa11.22□□□□□ -0.61
TOP3B-210ENST00000444502 RANBP17Q9H2T7 1088 aaKnown RBP11.22□□□□□ -0.61
TOP3B-210ENST00000444502 WDR70Q9NW82 654 aa11.22□□□□□ -0.61
TOP3B-210ENST00000444502 TBX20Q9UMR3 447 aa11.22□□□□□ -0.61
TOP3B-210ENST00000444502 NWD2Q9ULI1 1742 aa11.22□□□□□ -0.61
TOP3B-210ENST00000444502 M0QYV0 167 aa11.22□□□□□ -0.61
TOP3B-210ENST00000444502 TGFB1I1O43294 461 aa11.22□□□□□ -0.61
TOP3B-210ENST00000444502 MED7O43513 233 aa11.22□□□□□ -0.61
TOP3B-210ENST00000444502 INSRRP14616 1297 aa11.22□□□□□ -0.61
TOP3B-210ENST00000444502 ATP2A2P16615 1042 aaKnown RBP11.22□□□□□ -0.61
TOP3B-210ENST00000444502 MAGOHP61326 146 aaKnown RBP11.22□□□□□ -0.61
TOP3B-210ENST00000444502 NCOA4Q13772 614 aa11.22□□□□□ -0.61
TOP3B-210ENST00000444502 FAM133BQ5BKY9 247 aaKnown RBP11.22□□□□□ -0.61
TOP3B-210ENST00000444502 MFSD4BQ5TF39 518 aa11.22□□□□□ -0.61
TOP3B-210ENST00000444502 MEI1Q5TIA1 1274 aa11.22□□□□□ -0.61
TOP3B-210ENST00000444502 CCDC137Q6PK04 289 aaKnown RBP11.22□□□□□ -0.61
TOP3B-210ENST00000444502 METTL7BQ6UX53 244 aa11.22□□□□□ -0.61
TOP3B-210ENST00000444502 RFX6Q8HWS3 928 aa11.22□□□□□ -0.61
TOP3B-210ENST00000444502 SIAH1Q8IUQ4 282 aa11.22□□□□□ -0.61
TOP3B-210ENST00000444502 TMEM35BQ8NCS4 154 aa11.22□□□□□ -0.61
TOP3B-210ENST00000444502 MAIP1Q8WWC4 291 aa11.22□□□□□ -0.61
TOP3B-210ENST00000444502 UBXN6Q9BZV1 441 aa11.22□□□□□ -0.61
TOP3B-210ENST00000444502 GANQ9H2C0 597 aa11.22□□□□□ -0.61
TOP3B-210ENST00000444502 VIPAS39Q9H9C1 493 aa11.22□□□□□ -0.61
TOP3B-210ENST00000444502 CYP39A1Q9NYL5 469 aa11.22□□□□□ -0.61
TOP3B-210ENST00000444502 VAV3Q9UKW4 847 aa11.22□□□□□ -0.61
TOP3B-210ENST00000444502 FNDC3AQ9Y2H6 1198 aaKnown RBP11.22□□□□□ -0.61
TOP3B-210ENST00000444502 PRG3Q9Y2Y8 225 aaPredicted RBP11.22□□□□□ -0.61
TOP3B-210ENST00000444502 MYH6P13533 1939 aa11.22□□□□□ -0.61
TOP3B-210ENST00000444502 MANSC4A6NHS7 340 aaPredicted RBP11.21□□□□□ -0.61
TOP3B-210ENST00000444502 POC1B-GALNT4F8VUJ3 575 aa11.21□□□□□ -0.61
TOP3B-210ENST00000444502 BNIP3LO60238 219 aa11.21□□□□□ -0.61
TOP3B-210ENST00000444502 RTN2O75298 545 aa11.21□□□□□ -0.61
TOP3B-210ENST00000444502 KRT1P04264 644 aa11.21□□□□□ -0.61
TOP3B-210ENST00000444502 TMEM253P0C7T8 217 aa11.21□□□□□ -0.61
TOP3B-210ENST00000444502 TAS1R2Q8TE23 839 aa11.21□□□□□ -0.61
TOP3B-210ENST00000444502 ZNF483Q8TF39 744 aaPredicted RBP11.21□□□□□ -0.61
TOP3B-210ENST00000444502 KLHL11Q9NVR0 708 aa11.21□□□□□ -0.61
TOP3B-210ENST00000444502 IGSF9BQ9UPX0 1349 aa11.21□□□□□ -0.61
TOP3B-210ENST00000444502 TUBGCP6Q96RT7 1819 aa11.21□□□□□ -0.61
TOP3B-210ENST00000444502 SYNGAP1Q96PV0 1343 aa11.21□□□□□ -0.61
TOP3B-210ENST00000444502 A0A087WZ62 844 aa11.21□□□□□ -0.61
TOP3B-210ENST00000444502 NOL4O94818 638 aa11.21□□□□□ -0.61
TOP3B-210ENST00000444502 PRLRP16471 622 aa11.21□□□□□ -0.61
TOP3B-210ENST00000444502 CACNB2Q08289 660 aaPredicted RBP11.21□□□□□ -0.61
TOP3B-210ENST00000444502 AMHR2Q16671 573 aa11.21□□□□□ -0.61
TOP3B-210ENST00000444502 KIAA1755Q5JYT7 1200 aa11.21□□□□□ -0.61
TOP3B-210ENST00000444502 IER5Q5VY09 327 aa11.21□□□□□ -0.61
TOP3B-210ENST00000444502 BTNL9Q6UXG8 535 aa11.21□□□□□ -0.61
TOP3B-210ENST00000444502 ARMCX6Q7L4S7 300 aa11.21□□□□□ -0.61
TOP3B-210ENST00000444502 C3orf20Q8ND61 904 aa11.21□□□□□ -0.61
TOP3B-210ENST00000444502 B4GALNT2Q8NHY0 566 aa11.21□□□□□ -0.61
TOP3B-210ENST00000444502 STAMBPL1Q96FJ0 436 aa11.21□□□□□ -0.61
TOP3B-210ENST00000444502 FDXACB1Q9BRP7 624 aaPredicted RBP11.21□□□□□ -0.61
TOP3B-210ENST00000444502 TMEM106CQ9BVX2 250 aa11.21□□□□□ -0.61
TOP3B-210ENST00000444502 MRPL47Q9HD33 250 aaKnown RBP11.21□□□□□ -0.61
TOP3B-210ENST00000444502 RASSF10A6NK89 507 aa11.21□□□□□ -0.62
TOP3B-210ENST00000444502 CALCAP01258 141 aa11.21□□□□□ -0.62
TOP3B-210ENST00000444502 PYGLP06737 847 aa11.21□□□□□ -0.62
TOP3B-210ENST00000444502 MMEP08473 750 aa11.21□□□□□ -0.62
TOP3B-210ENST00000444502 FAM153BP0C7A2 387 aa11.21□□□□□ -0.62
TOP3B-210ENST00000444502 YY1P25490 414 aa11.21□□□□□ -0.62
TOP3B-210ENST00000444502 PPIL2Q13356 520 aa11.21□□□□□ -0.62
TOP3B-210ENST00000444502 ORC1Q13415 861 aa11.21□□□□□ -0.62
TOP3B-210ENST00000444502 PDCD2Q16342 344 aaPredicted RBP11.21□□□□□ -0.62
TOP3B-210ENST00000444502 FAM153CQ494X1 144 aa11.21□□□□□ -0.62
TOP3B-210ENST00000444502 HP1BP3Q5SSJ5 553 aaPredicted RBP11.21□□□□□ -0.62
TOP3B-210ENST00000444502 HYIQ5T013 277 aa11.21□□□□□ -0.62
TOP3B-210ENST00000444502 CHADLQ6NUI6 762 aa11.21□□□□□ -0.62
TOP3B-210ENST00000444502 ARHGEF19Q8IW93 802 aa11.21□□□□□ -0.62
TOP3B-210ENST00000444502 ZNF473Q8WTR7 871 aaKnown RBP11.21□□□□□ -0.62
TOP3B-210ENST00000444502 FAM49BQ9NUQ9 324 aa11.21□□□□□ -0.62
TOP3B-210ENST00000444502 FAM153AQ9UHL3 310 aa11.21□□□□□ -0.62
TOP3B-210ENST00000444502 TRIM17Q9Y577 477 aa11.21□□□□□ -0.62
TOP3B-210ENST00000444502 USH1CQ9Y6N9 552 aa11.21□□□□□ -0.62
TOP3B-210ENST00000444502 KLHL33A6NCF5 533 aa11.2□□□□□ -0.62
TOP3B-210ENST00000444502 PABPN1LA6NDY0 278 aaKnown RBP11.2□□□□□ -0.62
TOP3B-210ENST00000444502 RGS7P49802 495 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms