RNA–Protein interactions for RNA: ENST00000422489.1

NUP50-206, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-206ENST00000422489 ZNF720Q7Z2F6 126 aa10.1□□□□□ -0.79
NUP50-206ENST00000422489 USP37Q86T82 979 aa10.1□□□□□ -0.79
NUP50-206ENST00000422489 SFR1Q86XK3 245 aa10.1□□□□□ -0.79
NUP50-206ENST00000422489 SIX5Q8N196 739 aa10.1□□□□□ -0.79
NUP50-206ENST00000422489 PDILTQ8N807 584 aa10.1□□□□□ -0.79
NUP50-206ENST00000422489 BEST2Q8NFU1 509 aa10.1□□□□□ -0.79
NUP50-206ENST00000422489 NOC3LQ8WTT2 800 aaKnown RBP10.1□□□□□ -0.79
NUP50-206ENST00000422489 ING5Q8WYH8 240 aa10.1□□□□□ -0.79
NUP50-206ENST00000422489 ATOH1Q92858 354 aaPredicted RBP10.1□□□□□ -0.79
NUP50-206ENST00000422489 NXPE3Q969Y0 559 aa10.1□□□□□ -0.79
NUP50-206ENST00000422489 MCRS1Q96EZ8 462 aa10.1□□□□□ -0.79
NUP50-206ENST00000422489 SUSD3Q96L08 255 aa10.1□□□□□ -0.79
NUP50-206ENST00000422489 ZNF396Q96N95 335 aaPredicted RBP10.1□□□□□ -0.79
NUP50-206ENST00000422489 IKZF4Q9H2S9 585 aa10.1□□□□□ -0.79
NUP50-206ENST00000422489 MRPL44Q9H9J2 332 aaKnown RBP10.1□□□□□ -0.79
NUP50-206ENST00000422489 FAM86C1Q9NVL1 165 aa10.1□□□□□ -0.79
NUP50-206ENST00000422489 STK17AQ9UEE5 414 aa10.1□□□□□ -0.79
NUP50-206ENST00000422489 CDH7Q9ULB5 785 aa10.1□□□□□ -0.79
NUP50-206ENST00000422489 PCDHB8Q9UN66 801 aa10.1□□□□□ -0.79
NUP50-206ENST00000422489 DUSP12Q9UNI6 340 aa10.1□□□□□ -0.79
NUP50-206ENST00000422489 MRPS23Q9Y3D9 190 aaKnown RBP10.1□□□□□ -0.79
NUP50-206ENST00000422489 WDR27A2RRH5 827 aa10.09□□□□□ -0.79
NUP50-206ENST00000422489 MYMKA6NI61 221 aa10.09□□□□□ -0.79
NUP50-206ENST00000422489 TISP43B9A030 160 aa10.09□□□□□ -0.79
NUP50-206ENST00000422489 H0Y858 1186 aa10.09□□□□□ -0.79
NUP50-206ENST00000422489 PI15O43692 258 aa10.09□□□□□ -0.79
NUP50-206ENST00000422489 ABLIM3O94929 683 aa10.09□□□□□ -0.79
NUP50-206ENST00000422489 GCNT3O95395 438 aa10.09□□□□□ -0.79
NUP50-206ENST00000422489 PAPLNO95428 1278 aa10.09□□□□□ -0.79
NUP50-206ENST00000422489 SEC24AO95486 1093 aa10.09□□□□□ -0.79
NUP50-206ENST00000422489 PIGRP01833 764 aa10.09□□□□□ -0.79
NUP50-206ENST00000422489 CPB1P15086 417 aa10.09□□□□□ -0.79
NUP50-206ENST00000422489 ATF2P15336 505 aa10.09□□□□□ -0.79
NUP50-206ENST00000422489 CYP3A5P20815 502 aa10.09□□□□□ -0.79
NUP50-206ENST00000422489 LRPAP1P30533 357 aa10.09□□□□□ -0.79
NUP50-206ENST00000422489 HOXA9P31269 272 aa10.09□□□□□ -0.79
NUP50-206ENST00000422489 ADCY1Q08828 1119 aa10.09□□□□□ -0.79
NUP50-206ENST00000422489 TCF15Q12870 199 aa10.09□□□□□ -0.79
NUP50-206ENST00000422489 MRPL58Q14197 206 aaKnown RBP10.09□□□□□ -0.79
NUP50-206ENST00000422489 ZBTB6Q15916 424 aa10.09□□□□□ -0.79
NUP50-206ENST00000422489 SLC8B1Q6J4K2 584 aa10.09□□□□□ -0.79
NUP50-206ENST00000422489 ZNF280DQ6N043 979 aa10.09□□□□□ -0.79
NUP50-206ENST00000422489 SLC39A4Q6P5W5 647 aa10.09□□□□□ -0.79
NUP50-206ENST00000422489 PARM1Q6UWI2 310 aa10.09□□□□□ -0.79
NUP50-206ENST00000422489 MAP4K3Q8IVH8 894 aa10.09□□□□□ -0.79
NUP50-206ENST00000422489 HSCBQ8IWL3 235 aa10.09□□□□□ -0.79
NUP50-206ENST00000422489 CD302Q8IX05 232 aa10.09□□□□□ -0.79
NUP50-206ENST00000422489 SYCP3Q8IZU3 236 aa10.09□□□□□ -0.79
NUP50-206ENST00000422489 TMEM105Q8N8V8 129 aa10.09□□□□□ -0.79
NUP50-206ENST00000422489 POMGNT1Q8WZA1 660 aa10.09□□□□□ -0.79
NUP50-206ENST00000422489 FGF13Q92913 245 aa10.09□□□□□ -0.79
NUP50-206ENST00000422489 ZNF512Q96ME7 567 aaPredicted RBP10.09□□□□□ -0.79
NUP50-206ENST00000422489 ACCSQ96QU6 501 aa10.09□□□□□ -0.79
NUP50-206ENST00000422489 FIZ1Q96SL8 496 aa10.09□□□□□ -0.79
NUP50-206ENST00000422489 CORO1BQ9BR76 489 aa10.09□□□□□ -0.79
NUP50-206ENST00000422489 RPP25Q9BUL9 199 aaKnown RBP10.09□□□□□ -0.79
NUP50-206ENST00000422489 PANK4Q9NVE7 773 aa10.09□□□□□ -0.79
NUP50-206ENST00000422489 CPSF3Q9UKF6 684 aaKnown RBP10.09□□□□□ -0.79
NUP50-206ENST00000422489 AGO2Q9UKV8 859 aaKnown RBP10.09□□□□□ -0.79
NUP50-206ENST00000422489 ZFP37Q9Y6Q3 630 aaPredicted RBP10.09□□□□□ -0.79
NUP50-206ENST00000422489 NUMBLQ9Y6R0 609 aa10.09□□□□□ -0.79
NUP50-206ENST00000422489 ANHXE9PGG2 379 aa10.08□□□□□ -0.8
NUP50-206ENST00000422489 PPEF2O14830 753 aa10.08□□□□□ -0.8
NUP50-206ENST00000422489 SPTLC2O15270 562 aa10.08□□□□□ -0.8
NUP50-206ENST00000422489 GALR2O43603 387 aaPredicted RBP10.08□□□□□ -0.8
NUP50-206ENST00000422489 TBC1D4O60343 1298 aa10.08□□□□□ -0.8
NUP50-206ENST00000422489 RHOP08100 348 aa10.08□□□□□ -0.8
NUP50-206ENST00000422489 OR4Q2P0C623 313 aa10.08□□□□□ -0.8
NUP50-206ENST00000422489 SRFP11831 508 aa10.08□□□□□ -0.8
NUP50-206ENST00000422489 NPR3P17342 541 aa10.08□□□□□ -0.8
NUP50-206ENST00000422489 GAP43P17677 238 aa10.08□□□□□ -0.8
NUP50-206ENST00000422489 MRE11P49959 708 aa10.08□□□□□ -0.8
NUP50-206ENST00000422489 CLCN5P51795 746 aa10.08□□□□□ -0.8
NUP50-206ENST00000422489 GPC5P78333 572 aa10.08□□□□□ -0.8
NUP50-206ENST00000422489 YWHAHQ04917 246 aaPredicted RBP10.08□□□□□ -0.8
NUP50-206ENST00000422489 HTR4Q13639 388 aa10.08□□□□□ -0.8
NUP50-206ENST00000422489 TMEM132DQ14C87 1099 aa10.08□□□□□ -0.8
NUP50-206ENST00000422489 POSTNQ15063 836 aa10.08□□□□□ -0.8
NUP50-206ENST00000422489 SPATA1Q5VX52 437 aa10.08□□□□□ -0.8
NUP50-206ENST00000422489 IQCEQ6IPM2 695 aa10.08□□□□□ -0.8
NUP50-206ENST00000422489 ARMCX5Q6P1M9 558 aa10.08□□□□□ -0.8
NUP50-206ENST00000422489 RNF19BQ6ZMZ0 732 aa10.08□□□□□ -0.8
NUP50-206ENST00000422489 RTL10Q7L3V2 364 aa10.08□□□□□ -0.8
NUP50-206ENST00000422489 TCEAL8Q8IYN2 117 aa10.08□□□□□ -0.8
NUP50-206ENST00000422489 ELMOD1Q8N336 334 aa10.08□□□□□ -0.8
NUP50-206ENST00000422489 GPR152Q8TDT2 470 aa10.08□□□□□ -0.8
NUP50-206ENST00000422489 FGF14Q92915 247 aa10.08□□□□□ -0.8
NUP50-206ENST00000422489 SNX21Q969T3 373 aa10.08□□□□□ -0.8
NUP50-206ENST00000422489 DNAJC19Q96DA6 116 aa10.08□□□□□ -0.8
NUP50-206ENST00000422489 PGLYRP2Q96PD5 576 aa10.08□□□□□ -0.8
NUP50-206ENST00000422489 PHOX2BQ99453 314 aa10.08□□□□□ -0.8
NUP50-206ENST00000422489 FAM213AQ9BRX8 229 aa10.08□□□□□ -0.8
NUP50-206ENST00000422489 IRF2BPLQ9H1B7 796 aa10.08□□□□□ -0.8
NUP50-206ENST00000422489 ST6GALNAC4Q9H4F1 302 aa10.08□□□□□ -0.8
NUP50-206ENST00000422489 WNT16Q9UBV4 365 aa10.08□□□□□ -0.8
NUP50-206ENST00000422489 EXOC7Q9UPT5 735 aa10.08□□□□□ -0.8
NUP50-206ENST00000422489 PCDHB13Q9Y5F0 798 aa10.08□□□□□ -0.8
NUP50-206ENST00000422489 A0A087X0B3 334 aa10.07□□□□□ -0.8
NUP50-206ENST00000422489 ARHGEF37A1IGU5 675 aa10.07□□□□□ -0.8
NUP50-206ENST00000422489 KRBA1A5PL33 1030 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms