RNA–Protein interactions for RNA: ENST00000419387.5

NUP50-205, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 1,018 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-205ENST00000419387 PIGRP01833 764 aa10.28□□□□□ -0.76
NUP50-205ENST00000419387 CXCL8P10145 99 aa10.28□□□□□ -0.76
NUP50-205ENST00000419387 ATF2P15336 505 aa10.28□□□□□ -0.76
NUP50-205ENST00000419387 MARCKSP29966 332 aaPredicted RBP10.28□□□□□ -0.76
NUP50-205ENST00000419387 LRPAP1P30533 357 aa10.28□□□□□ -0.76
NUP50-205ENST00000419387 ELF1P32519 619 aa10.28□□□□□ -0.76
NUP50-205ENST00000419387 MCM4P33991 863 aa10.28□□□□□ -0.76
NUP50-205ENST00000419387 DDIT3P35638 169 aa10.28□□□□□ -0.76
NUP50-205ENST00000419387 TNFSF9P41273 254 aa10.28□□□□□ -0.76
NUP50-205ENST00000419387 LIG4P49917 911 aa10.28□□□□□ -0.76
NUP50-205ENST00000419387 ARPP19P56211 112 aa10.28□□□□□ -0.76
NUP50-205ENST00000419387 ROR1Q01973 937 aa10.28□□□□□ -0.76
NUP50-205ENST00000419387 PABPC1LQ4VXU2 614 aaKnown RBP10.28□□□□□ -0.76
NUP50-205ENST00000419387 PARM1Q6UWI2 310 aa10.28□□□□□ -0.76
NUP50-205ENST00000419387 APPL2Q8NEU8 664 aa10.28□□□□□ -0.76
NUP50-205ENST00000419387 ST13P5Q8NFI4 369 aaPredicted RBP10.28□□□□□ -0.76
NUP50-205ENST00000419387 ITFG1Q8TB96 612 aa10.28□□□□□ -0.76
NUP50-205ENST00000419387 GPR152Q8TDT2 470 aa10.28□□□□□ -0.76
NUP50-205ENST00000419387 LARP4BQ92615 738 aaKnown RBP10.28□□□□□ -0.76
NUP50-205ENST00000419387 FGF13Q92913 245 aa10.28□□□□□ -0.76
NUP50-205ENST00000419387 CCSER1Q9C0I3 900 aa10.28□□□□□ -0.76
NUP50-205ENST00000419387 HCFC1R1Q9NWW0 138 aa10.28□□□□□ -0.76
NUP50-205ENST00000419387 TUBGCP4Q9UGJ1 667 aa10.28□□□□□ -0.76
NUP50-205ENST00000419387 KCNH3Q9ULD8 1083 aa10.28□□□□□ -0.76
NUP50-205ENST00000419387 UBQLN1Q9UMX0 589 aaKnown RBP10.28□□□□□ -0.76
NUP50-205ENST00000419387 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.28□□□□□ -0.76
NUP50-205ENST00000419387 CLIC4Q9Y696 253 aa10.28□□□□□ -0.76
NUP50-205ENST00000419387 DOCK8Q8NF50 2099 aa10.27□□□□□ -0.76
NUP50-205ENST00000419387 MYH11P35749 1972 aa10.27□□□□□ -0.77
NUP50-205ENST00000419387 ARHGEF37A1IGU5 675 aa10.27□□□□□ -0.77
NUP50-205ENST00000419387 WDR27A2RRH5 827 aa10.27□□□□□ -0.77
NUP50-205ENST00000419387 HNRNPDLO14979 420 aaKnown RBP10.27□□□□□ -0.77
NUP50-205ENST00000419387 OGTO15294 1046 aa10.27□□□□□ -0.77
NUP50-205ENST00000419387 LRG1P02750 347 aa10.27□□□□□ -0.77
NUP50-205ENST00000419387 ADRB2P07550 413 aa10.27□□□□□ -0.77
NUP50-205ENST00000419387 PTPN2P17706 415 aa10.27□□□□□ -0.77
NUP50-205ENST00000419387 CYP3A5P20815 502 aa10.27□□□□□ -0.77
NUP50-205ENST00000419387 ABCD1P33897 745 aa10.27□□□□□ -0.77
NUP50-205ENST00000419387 GTF2BQ00403 316 aa10.27□□□□□ -0.77
NUP50-205ENST00000419387 PPP2R3AQ06190 1150 aa10.27□□□□□ -0.77
NUP50-205ENST00000419387 SPAG1Q07617 926 aa10.27□□□□□ -0.77
NUP50-205ENST00000419387 PTPAQ15257 358 aa10.27□□□□□ -0.77
NUP50-205ENST00000419387 ZBTB6Q15916 424 aa10.27□□□□□ -0.77
NUP50-205ENST00000419387 CTXN3Q4LDR2 81 aa10.27□□□□□ -0.77
NUP50-205ENST00000419387 SPECC1Q5M775 1068 aa10.27□□□□□ -0.77
NUP50-205ENST00000419387 TPGS2Q68CL5 300 aa10.27□□□□□ -0.77
NUP50-205ENST00000419387 ZNF280DQ6N043 979 aa10.27□□□□□ -0.77
NUP50-205ENST00000419387 MTSS1LQ765P7 747 aa10.27□□□□□ -0.77
NUP50-205ENST00000419387 CD302Q8IX05 232 aa10.27□□□□□ -0.77
NUP50-205ENST00000419387 TCEAL8Q8IYN2 117 aa10.27□□□□□ -0.77
NUP50-205ENST00000419387 DDX12PQ92771 950 aa10.27□□□□□ -0.77
NUP50-205ENST00000419387 FGF14Q92915 247 aa10.27□□□□□ -0.77
NUP50-205ENST00000419387 SNX21Q969T3 373 aa10.27□□□□□ -0.77
NUP50-205ENST00000419387 EPSTI1Q96J88 318 aa10.27□□□□□ -0.77
NUP50-205ENST00000419387 TSPAN18Q96SJ8 248 aa10.27□□□□□ -0.77
NUP50-205ENST00000419387 FIZ1Q96SL8 496 aa10.27□□□□□ -0.77
NUP50-205ENST00000419387 RPP25Q9BUL9 199 aaKnown RBP10.27□□□□□ -0.77
NUP50-205ENST00000419387 ZHX3Q9H4I2 956 aa10.27□□□□□ -0.77
NUP50-205ENST00000419387 RPF1Q9H9Y2 349 aaKnown RBP10.27□□□□□ -0.77
NUP50-205ENST00000419387 CYP4F11Q9HBI6 524 aa10.27□□□□□ -0.77
NUP50-205ENST00000419387 AVENQ9NQS1 362 aaPredicted RBP10.27□□□□□ -0.77
NUP50-205ENST00000419387 SLC2A4RGQ9NR83 387 aa10.27□□□□□ -0.77
NUP50-205ENST00000419387 FBXL5Q9UKA1 691 aa10.27□□□□□ -0.77
NUP50-205ENST00000419387 CA14Q9ULX7 337 aa10.27□□□□□ -0.77
NUP50-205ENST00000419387 BOLA1Q9Y3E2 137 aa10.27□□□□□ -0.77
NUP50-205ENST00000419387 SRPRBQ9Y5M8 271 aaKnown RBP10.27□□□□□ -0.77
NUP50-205ENST00000419387 WDFY4Q6ZS81 3184 aa10.27□□□□□ -0.77
NUP50-205ENST00000419387 CITO14578 2027 aa10.26□□□□□ -0.77
NUP50-205ENST00000419387 DOCK6Q96HP0 2047 aa10.26□□□□□ -0.77
NUP50-205ENST00000419387 A0A0B4J269 797 aa10.26□□□□□ -0.77
NUP50-205ENST00000419387 PROB1E7EW31 1015 aa10.26□□□□□ -0.77
NUP50-205ENST00000419387 M0QZQ0 153 aa10.26□□□□□ -0.77
NUP50-205ENST00000419387 PRRG1O14668 218 aa10.26□□□□□ -0.77
NUP50-205ENST00000419387 XPOTO43592 962 aaKnown RBP10.26□□□□□ -0.77
NUP50-205ENST00000419387 FAM189A1O60320 539 aa10.26□□□□□ -0.77
NUP50-205ENST00000419387 TBCAO75347 108 aaKnown RBP10.26□□□□□ -0.77
NUP50-205ENST00000419387 SEC24AO95486 1093 aa10.26□□□□□ -0.77
NUP50-205ENST00000419387 RHOP08100 348 aa10.26□□□□□ -0.77
NUP50-205ENST00000419387 SYT1P21579 422 aa10.26□□□□□ -0.77
NUP50-205ENST00000419387 RFX1P22670 979 aa10.26□□□□□ -0.77
NUP50-205ENST00000419387 NMT1P30419 496 aaKnown RBP10.26□□□□□ -0.77
NUP50-205ENST00000419387 GPC5P78333 572 aa10.26□□□□□ -0.77
NUP50-205ENST00000419387 RESTQ13127 1097 aa10.26□□□□□ -0.77
NUP50-205ENST00000419387 ENOX2Q16206 610 aaKnown RBP10.26□□□□□ -0.77
NUP50-205ENST00000419387 ZBTB41Q5SVQ8 909 aa10.26□□□□□ -0.77
NUP50-205ENST00000419387 PHLDB3Q6NSJ2 640 aa10.26□□□□□ -0.77
NUP50-205ENST00000419387 USP49Q70CQ1 688 aa10.26□□□□□ -0.77
NUP50-205ENST00000419387 MAP4K3Q8IVH8 894 aa10.26□□□□□ -0.77
NUP50-205ENST00000419387 CCDC105Q8IYK2 499 aa10.26□□□□□ -0.77
NUP50-205ENST00000419387 TMEM130Q8N3G9 435 aa10.26□□□□□ -0.77
NUP50-205ENST00000419387 KRI1Q8N9T8 703 aaKnown RBP10.26□□□□□ -0.77
NUP50-205ENST00000419387 DTWD2Q8NBA8 298 aa10.26□□□□□ -0.77
NUP50-205ENST00000419387 INTS4Q96HW7 963 aaKnown RBP10.26□□□□□ -0.77
NUP50-205ENST00000419387 TBC1D17Q9HA65 648 aa10.26□□□□□ -0.77
NUP50-205ENST00000419387 CCDC39Q9UFE4 941 aa10.26□□□□□ -0.77
NUP50-205ENST00000419387 FBXO2Q9UK22 296 aaPredicted RBP10.26□□□□□ -0.77
NUP50-205ENST00000419387 MAFFQ9ULX9 164 aa10.26□□□□□ -0.77
NUP50-205ENST00000419387 MRPS23Q9Y3D9 190 aaKnown RBP10.26□□□□□ -0.77
NUP50-205ENST00000419387 ANKRD63C9JTQ0 380 aa10.25□□□□□ -0.77
NUP50-205ENST00000419387 OAZ2O95190 189 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms