RNA–Protein interactions for RNA: ENST00000415772.5

SBDSP1-201, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 2

Gene SBDSP1, Length 733 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-201ENST00000415772 MICAL2O94851 1124 aa17■□□□□ 0.31
SBDSP1-201ENST00000415772 KCNE1P15382 129 aa17■□□□□ 0.31
SBDSP1-201ENST00000415772 PSMC3P17980 439 aa17■□□□□ 0.31
SBDSP1-201ENST00000415772 TWF1Q12792 350 aa17■□□□□ 0.31
SBDSP1-201ENST00000415772 PTGDRQ13258 359 aa17■□□□□ 0.31
SBDSP1-201ENST00000415772 PLD1Q13393 1074 aa17■□□□□ 0.31
SBDSP1-201ENST00000415772 NBR1Q14596 966 aa17■□□□□ 0.31
SBDSP1-201ENST00000415772 NOLC1Q14978 699 aaKnown RBP eCLIP17■□□□□ 0.31
SBDSP1-201ENST00000415772 XKR4Q5GH76 650 aa17■□□□□ 0.31
SBDSP1-201ENST00000415772 FAM78AQ5JUQ0 283 aa17■□□□□ 0.31
SBDSP1-201ENST00000415772 CD300LGQ6UXG3 332 aa17■□□□□ 0.31
SBDSP1-201ENST00000415772 DTHD1Q6ZMT9 781 aa17■□□□□ 0.31
SBDSP1-201ENST00000415772 USP37Q86T82 979 aa17■□□□□ 0.31
SBDSP1-201ENST00000415772 FAM200AQ8TCP9 573 aa17■□□□□ 0.31
SBDSP1-201ENST00000415772 DEPDC1BQ8WUY9 529 aa17■□□□□ 0.31
SBDSP1-201ENST00000415772 FAM3CQ92520 227 aa17■□□□□ 0.31
SBDSP1-201ENST00000415772 SMARCD2Q92925 531 aa17■□□□□ 0.31
SBDSP1-201ENST00000415772 C18orf25Q96B23 403 aaPredicted RBP17■□□□□ 0.31
SBDSP1-201ENST00000415772 TCEAL4Q96EI5 215 aa17■□□□□ 0.31
SBDSP1-201ENST00000415772 SUSD3Q96L08 255 aa17■□□□□ 0.31
SBDSP1-201ENST00000415772 ZMAT2Q96NC0 199 aaKnown RBP17■□□□□ 0.31
SBDSP1-201ENST00000415772 TBC1D32Q96NH3 1257 aa17■□□□□ 0.31
SBDSP1-201ENST00000415772 CNTN3Q9P232 1028 aa17■□□□□ 0.31
SBDSP1-201ENST00000415772 AFF4Q9UHB7 1163 aaKnown RBP17■□□□□ 0.31
SBDSP1-201ENST00000415772 CDV3Q9UKY7 258 aaKnown RBP17■□□□□ 0.31
SBDSP1-201ENST00000415772 VPS13AQ96RL7 3174 aa17■□□□□ 0.31
SBDSP1-201ENST00000415772 PRR5-ARHGAP8B1AHC4 643 aa16.99■□□□□ 0.31
SBDSP1-201ENST00000415772 CLDN3O15551 220 aa16.99■□□□□ 0.31
SBDSP1-201ENST00000415772 SEC24AO95486 1093 aa16.99■□□□□ 0.31
SBDSP1-201ENST00000415772 ARHGAP8P85298 464 aa16.99■□□□□ 0.31
SBDSP1-201ENST00000415772 LMNB2Q03252 620 aa16.99■□□□□ 0.31
SBDSP1-201ENST00000415772 YWHAHQ04917 246 aaPredicted RBP16.99■□□□□ 0.31
SBDSP1-201ENST00000415772 RAD51AP2Q09MP3 1159 aa16.99■□□□□ 0.31
SBDSP1-201ENST00000415772 MTAPQ13126 283 aa16.99■□□□□ 0.31
SBDSP1-201ENST00000415772 PRSS36Q5K4E3 855 aa16.99■□□□□ 0.31
SBDSP1-201ENST00000415772 ALKAL1Q6UXT8 129 aa16.99■□□□□ 0.31
SBDSP1-201ENST00000415772 IGSF22Q8N9C0 903 aa16.99■□□□□ 0.31
SBDSP1-201ENST00000415772 ZBTB44Q8NCP5 570 aa16.99■□□□□ 0.31
SBDSP1-201ENST00000415772 DDX12PQ92771 950 aa16.99■□□□□ 0.31
SBDSP1-201ENST00000415772 ASB16Q96NS5 453 aa16.99■□□□□ 0.31
SBDSP1-201ENST00000415772 IER2Q9BTL4 223 aa16.99■□□□□ 0.31
SBDSP1-201ENST00000415772 GPR88Q9GZN0 384 aa16.99■□□□□ 0.31
SBDSP1-201ENST00000415772 EPC1Q9H2F5 836 aa16.99■□□□□ 0.31
SBDSP1-201ENST00000415772 PTPRHQ9HD43 1115 aa16.99■□□□□ 0.31
SBDSP1-201ENST00000415772 ARHGAP28Q9P2N2 729 aa16.99■□□□□ 0.31
SBDSP1-201ENST00000415772 MAFFQ9ULX9 164 aa16.99■□□□□ 0.31
SBDSP1-201ENST00000415772 KIF3AQ9Y496 699 aa16.99■□□□□ 0.31
SBDSP1-201ENST00000415772 PIAS3Q9Y6X2 628 aa16.99■□□□□ 0.31
SBDSP1-201ENST00000415772 SFI1A8K8P3 1242 aa16.98■□□□□ 0.31
SBDSP1-201ENST00000415772 XPOTO43592 962 aaKnown RBP16.98■□□□□ 0.31
SBDSP1-201ENST00000415772 TOM1L1O75674 476 aa16.98■□□□□ 0.31
SBDSP1-201ENST00000415772 CCR3P51677 355 aa16.98■□□□□ 0.31
SBDSP1-201ENST00000415772 RINT1Q6NUQ1 792 aa16.98■□□□□ 0.31
SBDSP1-201ENST00000415772 DSTYKQ6XUX3 929 aa16.98■□□□□ 0.31
SBDSP1-201ENST00000415772 HS6ST3Q8IZP7 471 aa16.98■□□□□ 0.31
SBDSP1-201ENST00000415772 ZSCAN18Q8TBC5 510 aaPredicted RBP16.98■□□□□ 0.31
SBDSP1-201ENST00000415772 E2F7Q96AV8 911 aa16.98■□□□□ 0.31
SBDSP1-201ENST00000415772 RUSC1Q9BVN2 902 aa16.98■□□□□ 0.31
SBDSP1-201ENST00000415772 OXCT2Q9BYC2 517 aaPredicted RBP16.98■□□□□ 0.31
SBDSP1-201ENST00000415772 LMAN1LQ9HAT1 526 aa16.98■□□□□ 0.31
SBDSP1-201ENST00000415772 ZNF334Q9HCZ1 680 aaPredicted RBP16.98■□□□□ 0.31
SBDSP1-201ENST00000415772 SH2B1Q9NRF2 756 aaPredicted RBP16.98■□□□□ 0.31
SBDSP1-201ENST00000415772 DLL3Q9NYJ7 618 aa16.98■□□□□ 0.31
SBDSP1-201ENST00000415772 PCDHB8Q9UN66 801 aa16.98■□□□□ 0.31
SBDSP1-201ENST00000415772 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.98■□□□□ 0.31
SBDSP1-201ENST00000415772 SPTBN4Q9H254 2564 aa16.98■□□□□ 0.31
SBDSP1-201ENST00000415772 RIF1Q5UIP0 2472 aaKnown RBP16.97■□□□□ 0.31
SBDSP1-201ENST00000415772 PP2D1A8MPX8 630 aa16.97■□□□□ 0.31
SBDSP1-201ENST00000415772 H0YCG3 227 aa16.97■□□□□ 0.31
SBDSP1-201ENST00000415772 DPYSL4O14531 572 aa16.97■□□□□ 0.31
SBDSP1-201ENST00000415772 GJA1P17302 382 aa16.97■□□□□ 0.31
SBDSP1-201ENST00000415772 ALDH1A3P47895 512 aa16.97■□□□□ 0.31
SBDSP1-201ENST00000415772 KPNA1P52294 538 aaPredicted RBP16.97■□□□□ 0.31
SBDSP1-201ENST00000415772 EPHB3P54753 998 aa16.97■□□□□ 0.31
SBDSP1-201ENST00000415772 PPP2R3AQ06190 1150 aa16.97■□□□□ 0.31
SBDSP1-201ENST00000415772 ST3GAL1Q11201 340 aa16.97■□□□□ 0.31
SBDSP1-201ENST00000415772 RABEP1Q15276 862 aa16.97■□□□□ 0.31
SBDSP1-201ENST00000415772 SEZ6Q53EL9 994 aa16.97■□□□□ 0.31
SBDSP1-201ENST00000415772 MCTP1Q6DN14 999 aa16.97■□□□□ 0.31
SBDSP1-201ENST00000415772 VITQ6UXI7 678 aa16.97■□□□□ 0.31
SBDSP1-201ENST00000415772 PRR23BQ6ZRT6 265 aa16.97■□□□□ 0.31
SBDSP1-201ENST00000415772 KIF12Q96FN5 646 aa16.97■□□□□ 0.31
SBDSP1-201ENST00000415772 ZBTB45Q96K62 511 aaPredicted RBP16.97■□□□□ 0.31
SBDSP1-201ENST00000415772 KIF2CQ99661 725 aa16.97■□□□□ 0.31
SBDSP1-201ENST00000415772 PRMT8Q9NR22 394 aaPredicted RBP16.97■□□□□ 0.31
SBDSP1-201ENST00000415772 PCDHB6Q9Y5E3 794 aa16.97■□□□□ 0.31
SBDSP1-201ENST00000415772 PLS3P13797 630 aa16.96■□□□□ 0.31
SBDSP1-201ENST00000415772 PROZP22891 400 aa16.96■□□□□ 0.31
SBDSP1-201ENST00000415772 FCARP24071 287 aa16.96■□□□□ 0.31
SBDSP1-201ENST00000415772 CDC25AP30304 524 aa16.96■□□□□ 0.31
SBDSP1-201ENST00000415772 PRPHP41219 470 aa16.96■□□□□ 0.31
SBDSP1-201ENST00000415772 VIPR2P41587 438 aa16.96■□□□□ 0.31
SBDSP1-201ENST00000415772 CCR2P41597 374 aa16.96■□□□□ 0.31
SBDSP1-201ENST00000415772 MRPL58Q14197 206 aaKnown RBP16.96■□□□□ 0.31
SBDSP1-201ENST00000415772 LRRC32Q14392 662 aa16.96■□□□□ 0.31
SBDSP1-201ENST00000415772 ARMCX5Q6P1M9 558 aa16.96■□□□□ 0.31
SBDSP1-201ENST00000415772 C1orf228Q6PIY5 440 aa16.96■□□□□ 0.31
SBDSP1-201ENST00000415772 RNF19BQ6ZMZ0 732 aa16.96■□□□□ 0.31
SBDSP1-201ENST00000415772 TAS1R3Q7RTX0 852 aa16.96■□□□□ 0.31
SBDSP1-201ENST00000415772 HAUS6Q7Z4H7 955 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 163 ms