RNA–Protein interactions for RNA: ENST00000414218.1

LMBR1-203, Transcript of limb development membrane protein 1, humanhuman

TSL 5

Gene LMBR1, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-203ENST00000414218 PPP2R3AQ06190 1150 aa22.44■■□□□ 1.18
LMBR1-203ENST00000414218 CTXN3Q4LDR2 81 aa22.44■■□□□ 1.18
LMBR1-203ENST00000414218 PABPC1LQ4VXU2 614 aaKnown RBP22.44■■□□□ 1.18
LMBR1-203ENST00000414218 SLC39A4Q6P5W5 647 aa22.44■■□□□ 1.18
LMBR1-203ENST00000414218 PARM1Q6UWI2 310 aa22.44■■□□□ 1.18
LMBR1-203ENST00000414218 DDX12PQ92771 950 aa22.44■■□□□ 1.18
LMBR1-203ENST00000414218 RPP25Q9BUL9 199 aaKnown RBP22.44■■□□□ 1.18
LMBR1-203ENST00000414218 RPF1Q9H9Y2 349 aaKnown RBP22.44■■□□□ 1.18
LMBR1-203ENST00000414218 PCDHB8Q9UN66 801 aa22.44■■□□□ 1.18
LMBR1-203ENST00000414218 STK25O00506 426 aa22.43■■□□□ 1.18
LMBR1-203ENST00000414218 LRPAP1P30533 357 aa22.43■■□□□ 1.18
LMBR1-203ENST00000414218 GUCY2FP51841 1108 aa22.43■■□□□ 1.18
LMBR1-203ENST00000414218 GTF2BQ00403 316 aa22.43■■□□□ 1.18
LMBR1-203ENST00000414218 ZC2HC1CQ53FD0 456 aaPredicted RBP22.43■■□□□ 1.18
LMBR1-203ENST00000414218 DYMQ7RTS9 669 aa22.43■■□□□ 1.18
LMBR1-203ENST00000414218 KRI1Q8N9T8 703 aaKnown RBP22.43■■□□□ 1.18
LMBR1-203ENST00000414218 APPL2Q8NEU8 664 aa22.43■■□□□ 1.18
LMBR1-203ENST00000414218 GPR152Q8TDT2 470 aa22.43■■□□□ 1.18
LMBR1-203ENST00000414218 ING5Q8WYH8 240 aa22.43■■□□□ 1.18
LMBR1-203ENST00000414218 FGF14Q92915 247 aa22.43■■□□□ 1.18
LMBR1-203ENST00000414218 FAM212AQ96EL1 285 aa22.43■■□□□ 1.18
LMBR1-203ENST00000414218 INTS4Q96HW7 963 aaKnown RBP22.43■■□□□ 1.18
LMBR1-203ENST00000414218 MSTO1Q9BUK6 570 aa22.43■■□□□ 1.18
LMBR1-203ENST00000414218 CCDC39Q9UFE4 941 aa22.43■■□□□ 1.18
LMBR1-203ENST00000414218 UBQLN1Q9UMX0 589 aaKnown RBP22.43■■□□□ 1.18
LMBR1-203ENST00000414218 ARHGEF37A1IGU5 675 aa22.42■■□□□ 1.18
LMBR1-203ENST00000414218 ANKRD63C9JTQ0 380 aa22.42■■□□□ 1.18
LMBR1-203ENST00000414218 SEC24AO95486 1093 aa22.42■■□□□ 1.18
LMBR1-203ENST00000414218 ATF2P15336 505 aa22.42■■□□□ 1.18
LMBR1-203ENST00000414218 AOC1P19801 751 aa22.42■■□□□ 1.18
LMBR1-203ENST00000414218 RRAGBQ5VZM2 374 aa22.42■■□□□ 1.18
LMBR1-203ENST00000414218 CYP4F11Q9HBI6 524 aa22.42■■□□□ 1.18
LMBR1-203ENST00000414218 STK17AQ9UEE5 414 aa22.42■■□□□ 1.18
LMBR1-203ENST00000414218 KCNH3Q9ULD8 1083 aa22.42■■□□□ 1.18
LMBR1-203ENST00000414218 MTMR6Q9Y217 621 aa22.42■■□□□ 1.18
LMBR1-203ENST00000414218 LRG1P02750 347 aa22.41■■□□□ 1.18
LMBR1-203ENST00000414218 ADRB2P07550 413 aa22.41■■□□□ 1.18
LMBR1-203ENST00000414218 RHOP08100 348 aa22.41■■□□□ 1.18
LMBR1-203ENST00000414218 CYP3A5P20815 502 aa22.41■■□□□ 1.18
LMBR1-203ENST00000414218 ABCD1P33897 745 aa22.41■■□□□ 1.18
LMBR1-203ENST00000414218 ZNF280DQ6N043 979 aa22.41■■□□□ 1.18
LMBR1-203ENST00000414218 SFR1Q86XK3 245 aa22.41■■□□□ 1.18
LMBR1-203ENST00000414218 MAP4K3Q8IVH8 894 aa22.41■■□□□ 1.18
LMBR1-203ENST00000414218 TCEAL8Q8IYN2 117 aa22.41■■□□□ 1.18
LMBR1-203ENST00000414218 CPSF3Q9UKF6 684 aaKnown RBP22.41■■□□□ 1.18
LMBR1-203ENST00000414218 MRPS23Q9Y3D9 190 aaKnown RBP22.41■■□□□ 1.18
LMBR1-203ENST00000414218 TIMM13Q9Y5L4 95 aaPredicted RBP22.41■■□□□ 1.18
LMBR1-203ENST00000414218 MYH15Q9Y2K3 1946 aa22.41■■□□□ 1.18
LMBR1-203ENST00000414218 TISP43B9A030 160 aa22.4■■□□□ 1.18
LMBR1-203ENST00000414218 K7ELQ4 463 aaPredicted RBP22.4■■□□□ 1.18
LMBR1-203ENST00000414218 M0QZQ0 153 aa22.4■■□□□ 1.18
LMBR1-203ENST00000414218 XPOTO43592 962 aaKnown RBP22.4■■□□□ 1.18
LMBR1-203ENST00000414218 PTPN2P17706 415 aa22.4■■□□□ 1.18
LMBR1-203ENST00000414218 RFX1P22670 979 aa22.4■■□□□ 1.18
LMBR1-203ENST00000414218 TXLNAP40222 546 aa22.4■■□□□ 1.18
LMBR1-203ENST00000414218 SLC5A9Q2M3M2 681 aa22.4■■□□□ 1.18
LMBR1-203ENST00000414218 TPGS2Q68CL5 300 aa22.4■■□□□ 1.18
LMBR1-203ENST00000414218 JADE1Q6IE81 842 aa22.4■■□□□ 1.18
LMBR1-203ENST00000414218 MTSS1LQ765P7 747 aa22.4■■□□□ 1.18
LMBR1-203ENST00000414218 NPAS3Q8IXF0 933 aa22.4■■□□□ 1.18
LMBR1-203ENST00000414218 USP28Q96RU2 1077 aa22.4■■□□□ 1.18
LMBR1-203ENST00000414218 TSPAN18Q96SJ8 248 aa22.4■■□□□ 1.18
LMBR1-203ENST00000414218 RTP3Q9BQQ7 232 aa22.4■■□□□ 1.18
LMBR1-203ENST00000414218 SLC2A4RGQ9NR83 387 aa22.4■■□□□ 1.18
LMBR1-203ENST00000414218 GTF3C5Q9Y5Q8 519 aaPredicted RBP22.4■■□□□ 1.18
LMBR1-203ENST00000414218 CACNA1HO95180 2353 aa22.39■■□□□ 1.18
LMBR1-203ENST00000414218 MYMKA6NI61 221 aa22.39■■□□□ 1.17
LMBR1-203ENST00000414218 ACOT2P49753 483 aa22.39■■□□□ 1.17
LMBR1-203ENST00000414218 GPC5P78333 572 aa22.39■■□□□ 1.17
LMBR1-203ENST00000414218 YWHAHQ04917 246 aaPredicted RBP22.39■■□□□ 1.17
LMBR1-203ENST00000414218 ADCY1Q08828 1119 aa22.39■■□□□ 1.17
LMBR1-203ENST00000414218 SPATA1Q5VX52 437 aa22.39■■□□□ 1.17
LMBR1-203ENST00000414218 DSTYKQ6XUX3 929 aa22.39■■□□□ 1.17
LMBR1-203ENST00000414218 SV2BQ7L1I2 683 aa22.39■■□□□ 1.17
LMBR1-203ENST00000414218 ZNF720Q7Z2F6 126 aa22.39■■□□□ 1.17
LMBR1-203ENST00000414218 SNX21Q969T3 373 aa22.39■■□□□ 1.17
LMBR1-203ENST00000414218 MCRS1Q96EZ8 462 aa22.39■■□□□ 1.17
LMBR1-203ENST00000414218 CORO1BQ9BR76 489 aa22.39■■□□□ 1.17
LMBR1-203ENST00000414218 PANK2Q9BZ23 570 aa22.39■■□□□ 1.17
LMBR1-203ENST00000414218 IKZF4Q9H2S9 585 aa22.39■■□□□ 1.17
LMBR1-203ENST00000414218 ST6GALNAC4Q9H4F1 302 aa22.39■■□□□ 1.17
LMBR1-203ENST00000414218 TBC1D17Q9HA65 648 aa22.39■■□□□ 1.17
LMBR1-203ENST00000414218 AFF4Q9UHB7 1163 aaKnown RBP22.39■■□□□ 1.17
LMBR1-203ENST00000414218 INSL5Q9Y5Q6 135 aa22.39■■□□□ 1.17
LMBR1-203ENST00000414218 PPEF2O14830 753 aa22.38■■□□□ 1.17
LMBR1-203ENST00000414218 STX6O43752 255 aa22.38■■□□□ 1.17
LMBR1-203ENST00000414218 CPB1P15086 417 aa22.38■■□□□ 1.17
LMBR1-203ENST00000414218 AARSP49588 968 aaKnown RBP eCLIP22.38■■□□□ 1.17
LMBR1-203ENST00000414218 SLC39A14Q15043 492 aa22.38■■□□□ 1.17
LMBR1-203ENST00000414218 ADALQ6DHV7 355 aa22.38■■□□□ 1.17
LMBR1-203ENST00000414218 RNF19BQ6ZMZ0 732 aa22.38■■□□□ 1.17
LMBR1-203ENST00000414218 CD302Q8IX05 232 aa22.38■■□□□ 1.17
LMBR1-203ENST00000414218 DTWD2Q8NBA8 298 aa22.38■■□□□ 1.17
LMBR1-203ENST00000414218 BEST2Q8NFU1 509 aa22.38■■□□□ 1.17
LMBR1-203ENST00000414218 DNAJC19Q96DA6 116 aa22.38■■□□□ 1.17
LMBR1-203ENST00000414218 KXD1Q9BQD3 176 aa22.38■■□□□ 1.17
LMBR1-203ENST00000414218 ZSCAN16Q9H4T2 348 aaPredicted RBP22.38■■□□□ 1.17
LMBR1-203ENST00000414218 AVENQ9NQS1 362 aaPredicted RBP22.38■■□□□ 1.17
LMBR1-203ENST00000414218 ARHGEF3Q9NR81 526 aa22.38■■□□□ 1.17
LMBR1-203ENST00000414218 ANK1P16157 1881 aa22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms