RNA–Protein interactions for RNA: ENST00000399042.4

BRCC3-206, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene BRCC3, Length 954 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-206ENST00000399042 SV2AQ7L0J3 742 aa9.62□□□□□ -0.87
BRCC3-206ENST00000399042 EFCAB13Q8IY85 973 aa9.62□□□□□ -0.87
BRCC3-206ENST00000399042 CMTR2Q8IYT2 770 aaKnown RBP9.62□□□□□ -0.87
BRCC3-206ENST00000399042 TDHQ8IZJ6 230 aa9.62□□□□□ -0.87
BRCC3-206ENST00000399042 FBXL13Q8NEE6 735 aa9.62□□□□□ -0.87
BRCC3-206ENST00000399042 RABGGTAQ92696 567 aa9.62□□□□□ -0.87
BRCC3-206ENST00000399042 SLC35C1Q96A29 364 aa9.62□□□□□ -0.87
BRCC3-206ENST00000399042 HPDLQ96IR7 371 aa9.62□□□□□ -0.87
BRCC3-206ENST00000399042 FAM84AQ96KN4 292 aa9.62□□□□□ -0.87
BRCC3-206ENST00000399042 ZNF560Q96MR9 790 aa9.62□□□□□ -0.87
BRCC3-206ENST00000399042 ZNF558Q96NG5 402 aa9.62□□□□□ -0.87
BRCC3-206ENST00000399042 PPP1R10Q96QC0 940 aaKnown RBP9.62□□□□□ -0.87
BRCC3-206ENST00000399042 GDF15Q99988 308 aa9.62□□□□□ -0.87
BRCC3-206ENST00000399042 CRACR2AQ9BSW2 395 aa9.62□□□□□ -0.87
BRCC3-206ENST00000399042 GOLGA2P5Q9HBQ8 144 aa9.62□□□□□ -0.87
BRCC3-206ENST00000399042 MIOSQ9NXC5 875 aa9.62□□□□□ -0.87
BRCC3-206ENST00000399042 NXF1Q9UBU9 619 aaKnown RBP9.62□□□□□ -0.87
BRCC3-206ENST00000399042 MKI67P46013 3256 aaKnown RBP9.62□□□□□ -0.87
BRCC3-206ENST00000399042 CARNS1A5YM72 827 aa9.61□□□□□ -0.87
BRCC3-206ENST00000399042 LGALS16A8MUM7 142 aa9.61□□□□□ -0.87
BRCC3-206ENST00000399042 P4HA2O15460 535 aa9.61□□□□□ -0.87
BRCC3-206ENST00000399042 TRAPPC3O43617 180 aa9.61□□□□□ -0.87
BRCC3-206ENST00000399042 HLA-DRAP01903 254 aa9.61□□□□□ -0.87
BRCC3-206ENST00000399042 TPM1P09493 284 aa9.61□□□□□ -0.87
BRCC3-206ENST00000399042 LAG3P18627 525 aa9.61□□□□□ -0.87
BRCC3-206ENST00000399042 PNPLA4P41247 253 aa9.61□□□□□ -0.87
BRCC3-206ENST00000399042 CLCNKBP51801 687 aa9.61□□□□□ -0.87
BRCC3-206ENST00000399042 WNT7BP56706 349 aa9.61□□□□□ -0.87
BRCC3-206ENST00000399042 KRT17Q04695 432 aa9.61□□□□□ -0.87
BRCC3-206ENST00000399042 SV2CQ496J9 727 aa9.61□□□□□ -0.87
BRCC3-206ENST00000399042 XKR4Q5GH76 650 aa9.61□□□□□ -0.87
BRCC3-206ENST00000399042 TDRD10Q5VZ19 366 aaKnown RBP9.61□□□□□ -0.87
BRCC3-206ENST00000399042 DCLRE1AQ6PJP8 1040 aa9.61□□□□□ -0.87
BRCC3-206ENST00000399042 ZNF280BQ86YH2 543 aa9.61□□□□□ -0.87
BRCC3-206ENST00000399042 PLEKHO2Q8TD55 490 aa9.61□□□□□ -0.87
BRCC3-206ENST00000399042 TAS1R2Q8TE23 839 aa9.61□□□□□ -0.87
BRCC3-206ENST00000399042 HASPINQ8TF76 798 aa9.61□□□□□ -0.87
BRCC3-206ENST00000399042 KHSRPQ92945 711 aaKnown RBP eCLIP9.61□□□□□ -0.872e-6■■□□□ 14.2
BRCC3-206ENST00000399042 BORCS6Q96GS4 357 aa9.61□□□□□ -0.87
BRCC3-206ENST00000399042 MMS19Q96T76 1030 aa9.61□□□□□ -0.87
BRCC3-206ENST00000399042 DNAI2Q9GZS0 605 aa9.61□□□□□ -0.87
BRCC3-206ENST00000399042 CXCL16Q9H2A7 254 aa9.61□□□□□ -0.87
BRCC3-206ENST00000399042 RAB20Q9NX57 234 aa9.61□□□□□ -0.87
BRCC3-206ENST00000399042 GCNT4Q9P109 453 aa9.61□□□□□ -0.87
BRCC3-206ENST00000399042 MTUS1Q9ULD2 1270 aa9.61□□□□□ -0.87
BRCC3-206ENST00000399042 PLAGL2Q9UPG8 496 aa9.61□□□□□ -0.87
BRCC3-206ENST00000399042 PTPRJQ12913 1337 aa9.6□□□□□ -0.87
BRCC3-206ENST00000399042 SCN5AQ14524 2016 aa9.6□□□□□ -0.87
BRCC3-206ENST00000399042 ARHGEF37A1IGU5 675 aa9.6□□□□□ -0.87
BRCC3-206ENST00000399042 GRXCR1A8MXD5 290 aa9.6□□□□□ -0.87
BRCC3-206ENST00000399042 GOLGA6L6A8MZA4 724 aa9.6□□□□□ -0.87
BRCC3-206ENST00000399042 NT5C1B-RDH14C9J2C7 533 aa9.6□□□□□ -0.87
BRCC3-206ENST00000399042 HUS1O60921 280 aa9.6□□□□□ -0.87
BRCC3-206ENST00000399042 DDHD2O94830 711 aa9.6□□□□□ -0.87
BRCC3-206ENST00000399042 C4BPAP04003 597 aaKnown RBP9.6□□□□□ -0.87
BRCC3-206ENST00000399042 TRIM21P19474 475 aaKnown RBP9.6□□□□□ -0.87
BRCC3-206ENST00000399042 ATICP31939 592 aa9.6□□□□□ -0.87
BRCC3-206ENST00000399042 BMP8BP34820 402 aa9.6□□□□□ -0.87
BRCC3-206ENST00000399042 TAF6P49848 677 aa9.6□□□□□ -0.87
BRCC3-206ENST00000399042 BCAR1P56945 870 aa9.6□□□□□ -0.87
BRCC3-206ENST00000399042 MYL6P60660 151 aa9.6□□□□□ -0.87
BRCC3-206ENST00000399042 CLDN10P78369 228 aa9.6□□□□□ -0.87
BRCC3-206ENST00000399042 BMS1Q14692 1282 aaKnown RBP9.6□□□□□ -0.87
BRCC3-206ENST00000399042 SYCP1Q15431 976 aa9.6□□□□□ -0.87
BRCC3-206ENST00000399042 RAB30Q15771 203 aa9.6□□□□□ -0.87
BRCC3-206ENST00000399042 WDR72Q3MJ13 1102 aa9.6□□□□□ -0.87
BRCC3-206ENST00000399042 ZACNQ401N2 412 aa9.6□□□□□ -0.87
BRCC3-206ENST00000399042 CBWD6Q4V339 395 aa9.6□□□□□ -0.87
BRCC3-206ENST00000399042 ZNF667Q5HYK9 610 aa9.6□□□□□ -0.87
BRCC3-206ENST00000399042 CBWD3Q5JTY5 395 aa9.6□□□□□ -0.87
BRCC3-206ENST00000399042 CBWD5Q5RIA9 395 aa9.6□□□□□ -0.87
BRCC3-206ENST00000399042 C9orf57Q5W0N0 161 aa9.6□□□□□ -0.87
BRCC3-206ENST00000399042 KIAA1841Q6NSI8 718 aa9.6□□□□□ -0.87
BRCC3-206ENST00000399042 METTL23Q86XA0 190 aa9.6□□□□□ -0.87
BRCC3-206ENST00000399042 C1orf127Q8N9H9 656 aa9.6□□□□□ -0.87
BRCC3-206ENST00000399042 EHBP1Q8NDI1 1231 aa9.6□□□□□ -0.87
BRCC3-206ENST00000399042 GSTCDQ8NEC7 633 aa9.6□□□□□ -0.87
BRCC3-206ENST00000399042 NEK11Q8NG66 645 aa9.6□□□□□ -0.87
BRCC3-206ENST00000399042 ZNF516Q92618 1163 aa9.6□□□□□ -0.87
BRCC3-206ENST00000399042 MARVELD3Q96A59 401 aa9.6□□□□□ -0.87
BRCC3-206ENST00000399042 TMEM169Q96HH4 297 aa9.6□□□□□ -0.87
BRCC3-206ENST00000399042 NT5C1BQ96P26 610 aa9.6□□□□□ -0.87
BRCC3-206ENST00000399042 TMEM175Q9BSA9 504 aa9.6□□□□□ -0.87
BRCC3-206ENST00000399042 PI4K2AQ9BTU6 479 aa9.6□□□□□ -0.87
BRCC3-206ENST00000399042 LSM14BQ9BX40 385 aaKnown RBP9.6□□□□□ -0.87
BRCC3-206ENST00000399042 XPO4Q9C0E2 1151 aaKnown RBP9.6□□□□□ -0.87
BRCC3-206ENST00000399042 INTS2Q9H0H0 1204 aaKnown RBP9.6□□□□□ -0.87
BRCC3-206ENST00000399042 NRDE2Q9H7Z3 1164 aa9.6□□□□□ -0.87
BRCC3-206ENST00000399042 GRPEL1Q9HAV7 217 aa9.6□□□□□ -0.87
BRCC3-206ENST00000399042 SPG21Q9NZD8 308 aa9.6□□□□□ -0.87
BRCC3-206ENST00000399042 CACNG4Q9UBN1 327 aa9.6□□□□□ -0.87
BRCC3-206ENST00000399042 DNAJB4Q9UDY4 337 aa9.6□□□□□ -0.87
BRCC3-206ENST00000399042 PUF60Q9UHX1 559 aaKnown RBP9.6□□□□□ -0.87
BRCC3-206ENST00000399042 RWDD3Q9Y3V2 267 aa9.6□□□□□ -0.87
BRCC3-206ENST00000399042 PCDHA11Q9Y5I1 949 aa9.6□□□□□ -0.87
BRCC3-206ENST00000399042 SNX9Q9Y5X1 595 aa9.6□□□□□ -0.87
BRCC3-206ENST00000399042 MRPL42Q9Y6G3 142 aaKnown RBP9.6□□□□□ -0.87
BRCC3-206ENST00000399042 TANC1Q9C0D5 1861 aa9.59□□□□□ -0.87
BRCC3-206ENST00000399042 CEP290O15078 2479 aa9.59□□□□□ -0.87
BRCC3-206ENST00000399042 LRRC10BA6NIK2 292 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms