RNA–Protein interactions for RNA: ENST00000373019.4

SF3A3-201, Transcript of splicing factor 3a subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A3, Length 3,673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-201ENST00000373019 TTC7BQ86TV6 843 aa10.11□□□□□ -0.79
SF3A3-201ENST00000373019 TRABD2AQ86V40 505 aa10.11□□□□□ -0.79
SF3A3-201ENST00000373019 ZNF276Q8N554 614 aa10.11□□□□□ -0.79
SF3A3-201ENST00000373019 ZNF75CPQ92670 426 aaPredicted RBP10.11□□□□□ -0.79
SF3A3-201ENST00000373019 CDK5RAP3Q96JB5 506 aa10.11□□□□□ -0.79
SF3A3-201ENST00000373019 ZNF512BQ96KM6 892 aaPredicted RBP10.11□□□□□ -0.79
SF3A3-201ENST00000373019 ZSCAN10Q96SZ4 725 aaPredicted RBP10.11□□□□□ -0.79
SF3A3-201ENST00000373019 TAOK3Q9H2K8 898 aa10.11□□□□□ -0.79
SF3A3-201ENST00000373019 TUBA8Q9NY65 449 aaPredicted RBP10.11□□□□□ -0.79
SF3A3-201ENST00000373019 NINJ2Q9NZG7 142 aa10.11□□□□□ -0.79
SF3A3-201ENST00000373019 ZNHIT2Q9UHR6 403 aa10.11□□□□□ -0.79
SF3A3-201ENST00000373019 PLA2G4CQ9UP65 541 aa10.11□□□□□ -0.79
SF3A3-201ENST00000373019 TIMM22Q9Y584 194 aa10.11□□□□□ -0.79
SF3A3-201ENST00000373019 RIC1Q4ADV7 1423 aa10.11□□□□□ -0.79
SF3A3-201ENST00000373019 TRAF5O00463 557 aa10.11□□□□□ -0.79
SF3A3-201ENST00000373019 PRPF4O43172 522 aaKnown RBP eCLIP10.11□□□□□ -0.79
SF3A3-201ENST00000373019 ADCY3O60266 1144 aa10.11□□□□□ -0.79
SF3A3-201ENST00000373019 AMPD3Q01432 767 aa10.11□□□□□ -0.79
SF3A3-201ENST00000373019 OVGP1Q12889 678 aa10.11□□□□□ -0.79
SF3A3-201ENST00000373019 SPARCL1Q14515 664 aa10.11□□□□□ -0.79
SF3A3-201ENST00000373019 CYP1B1Q16678 543 aa10.11□□□□□ -0.79
SF3A3-201ENST00000373019 FOXR2Q6PJQ5 311 aa10.11□□□□□ -0.79
SF3A3-201ENST00000373019 SFR1Q86XK3 245 aa10.11□□□□□ -0.79
SF3A3-201ENST00000373019 LCORLQ8N3X6 602 aa10.11□□□□□ -0.79
SF3A3-201ENST00000373019 PLEKHO2Q8TD55 490 aa10.11□□□□□ -0.79
SF3A3-201ENST00000373019 RIC8AQ9NPQ8 531 aa10.11□□□□□ -0.79
SF3A3-201ENST00000373019 DMTF1Q9Y222 760 aa10.11□□□□□ -0.79
SF3A3-201ENST00000373019 NCANO14594 1321 aa10.11□□□□□ -0.79
SF3A3-201ENST00000373019 C15orf38-AP3S2A0A0A6YYH1 394 aa10.1□□□□□ -0.79
SF3A3-201ENST00000373019 FAM170AA1A519 330 aa10.1□□□□□ -0.79
SF3A3-201ENST00000373019 DNAJC6O75061 913 aa10.1□□□□□ -0.79
SF3A3-201ENST00000373019 KRT38O76015 456 aa10.1□□□□□ -0.79
SF3A3-201ENST00000373019 OXSR1O95747 527 aaPredicted RBP10.1□□□□□ -0.79
SF3A3-201ENST00000373019 CLPTM1O96005 669 aa10.1□□□□□ -0.79
SF3A3-201ENST00000373019 IVDP26440 423 aa10.1□□□□□ -0.79
SF3A3-201ENST00000373019 NCOA4Q13772 614 aa10.1□□□□□ -0.79
SF3A3-201ENST00000373019 TRAPPC3LQ5T215 181 aa10.1□□□□□ -0.79
SF3A3-201ENST00000373019 TMCO4Q5TGY1 634 aa10.1□□□□□ -0.79
SF3A3-201ENST00000373019 ISLR2Q6UXK2 745 aa10.1□□□□□ -0.79
SF3A3-201ENST00000373019 ARPINQ7Z6K5 226 aa10.1□□□□□ -0.79
SF3A3-201ENST00000373019 MYOCDQ8IZQ8 938 aa10.1□□□□□ -0.79
SF3A3-201ENST00000373019 FAM172AQ8WUF8 416 aa10.1□□□□□ -0.79
SF3A3-201ENST00000373019 GFM2Q969S9 779 aaKnown RBP10.1□□□□□ -0.79
SF3A3-201ENST00000373019 ARHGEF26Q96DR7 871 aa10.1□□□□□ -0.79
SF3A3-201ENST00000373019 CAMKK2Q96RR4 588 aa10.1□□□□□ -0.79
SF3A3-201ENST00000373019 FGFBP2Q9BYJ0 223 aa10.1□□□□□ -0.79
SF3A3-201ENST00000373019 KLHL4Q9C0H6 718 aa10.1□□□□□ -0.79
SF3A3-201ENST00000373019 SLC7A8Q9UHI5 535 aa10.1□□□□□ -0.79
SF3A3-201ENST00000373019 ADAMTS6Q9UKP5 1117 aa10.1□□□□□ -0.79
SF3A3-201ENST00000373019 DOLKQ9UPQ8 538 aa10.1□□□□□ -0.79
SF3A3-201ENST00000373019 CCDC160A6NGH7 325 aa10.1□□□□□ -0.79
SF3A3-201ENST00000373019 LDHAP00338 332 aaKnown RBP10.1□□□□□ -0.79
SF3A3-201ENST00000373019 STT3AP46977 705 aa10.1□□□□□ -0.79
SF3A3-201ENST00000373019 ACADVLP49748 655 aa10.1□□□□□ -0.79
SF3A3-201ENST00000373019 SLC18A1P54219 525 aa10.1□□□□□ -0.79
SF3A3-201ENST00000373019 VCPP55072 806 aaKnown RBP10.1□□□□□ -0.79
SF3A3-201ENST00000373019 KCNH2Q12809 1159 aa10.1□□□□□ -0.79
SF3A3-201ENST00000373019 CATIPQ7Z7H3 387 aa10.1□□□□□ -0.79
SF3A3-201ENST00000373019 ADGRG6Q86SQ4 1221 aa10.1□□□□□ -0.79
SF3A3-201ENST00000373019 CCDC105Q8IYK2 499 aa10.1□□□□□ -0.79
SF3A3-201ENST00000373019 MAGEB6Q8N7X4 407 aa10.1□□□□□ -0.79
SF3A3-201ENST00000373019 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.1□□□□□ -0.79
SF3A3-201ENST00000373019 RFFLQ8WZ73 363 aa10.1□□□□□ -0.79
SF3A3-201ENST00000373019 CCT7Q99832 543 aa10.1□□□□□ -0.79
SF3A3-201ENST00000373019 HEPHQ9BQS7 1158 aa10.1□□□□□ -0.79
SF3A3-201ENST00000373019 NEURL2Q9BR09 285 aa10.1□□□□□ -0.79
SF3A3-201ENST00000373019 TUBB6Q9BUF5 446 aa10.1□□□□□ -0.79
SF3A3-201ENST00000373019 SPZ1Q9BXG8 430 aa10.1□□□□□ -0.79
SF3A3-201ENST00000373019 SAP30BPQ9UHR5 308 aaKnown RBP10.1□□□□□ -0.79
SF3A3-201ENST00000373019 NEU2Q9Y3R4 380 aa10.1□□□□□ -0.79
SF3A3-201ENST00000373019 HBS1LQ9Y450 684 aaKnown RBP10.1□□□□□ -0.79
SF3A3-201ENST00000373019 CETN2P41208 172 aa10.1□□□□□ -0.79
SF3A3-201ENST00000373019 JAM2P57087 298 aa10.1□□□□□ -0.79
SF3A3-201ENST00000373019 SPIDRQ14159 915 aa10.1□□□□□ -0.79
SF3A3-201ENST00000373019 KRT72Q14CN4 511 aa10.1□□□□□ -0.79
SF3A3-201ENST00000373019 ANKDD1AQ495B1 522 aa10.1□□□□□ -0.79
SF3A3-201ENST00000373019 ANKRD20A4Q4UJ75 823 aa10.1□□□□□ -0.79
SF3A3-201ENST00000373019 IFIT1BQ5T764 474 aaKnown RBP10.1□□□□□ -0.79
SF3A3-201ENST00000373019 ZNF410Q86VK4 478 aa10.1□□□□□ -0.79
SF3A3-201ENST00000373019 SLC25A41Q8N5S1 370 aa10.1□□□□□ -0.79
SF3A3-201ENST00000373019 AK8Q96MA6 479 aa10.1□□□□□ -0.79
SF3A3-201ENST00000373019 CCDC85AQ96PX6 553 aaPredicted RBP10.1□□□□□ -0.79
SF3A3-201ENST00000373019 GRIP2Q9C0E4 1043 aa10.1□□□□□ -0.79
SF3A3-201ENST00000373019 PCDHA6Q9UN73 950 aa10.1□□□□□ -0.79
SF3A3-201ENST00000373019 PCDHA8Q9Y5H6 950 aa10.1□□□□□ -0.79
SF3A3-201ENST00000373019 TTLL13PA6NNM8 815 aa10.09□□□□□ -0.79
SF3A3-201ENST00000373019 H3BSA7 217 aa10.09□□□□□ -0.79
SF3A3-201ENST00000373019 MATN2O00339 956 aa10.09□□□□□ -0.79
SF3A3-201ENST00000373019 CBFA2T3O75081 653 aa10.09□□□□□ -0.79
SF3A3-201ENST00000373019 ESRRAP11474 423 aaPredicted RBP10.09□□□□□ -0.79
SF3A3-201ENST00000373019 HOXA10P31260 410 aaPredicted RBP10.09□□□□□ -0.79
SF3A3-201ENST00000373019 CPA2P48052 419 aa10.09□□□□□ -0.79
SF3A3-201ENST00000373019 COG7P83436 770 aa10.09□□□□□ -0.79
SF3A3-201ENST00000373019 GRB10Q13322 594 aa10.09□□□□□ -0.79
SF3A3-201ENST00000373019 GIPC3Q8TF64 312 aa10.09□□□□□ -0.79
SF3A3-201ENST00000373019 SELENONQ9NZV5 590 aa10.09□□□□□ -0.79
SF3A3-201ENST00000373019 PCDHA4Q9UN74 947 aa10.09□□□□□ -0.79
SF3A3-201ENST00000373019 LZTS1Q9Y250 596 aa10.09□□□□□ -0.79
SF3A3-201ENST00000373019 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.09□□□□□ -0.79
SF3A3-201ENST00000373019 NR2E3Q9Y5X4 410 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms