RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 ARID5AQ03989 594 aa12.97□□□□□ -0.33
USF1-203ENST00000368021 PTK2Q05397 1052 aa12.97□□□□□ -0.33
USF1-203ENST00000368021 PTK7Q13308 1070 aa12.97□□□□□ -0.33
USF1-203ENST00000368021 NCOA4Q13772 614 aa12.97□□□□□ -0.33
USF1-203ENST00000368021 SLC18A3Q16572 532 aa12.97□□□□□ -0.33
USF1-203ENST00000368021 TRAPPC11Q7Z392 1133 aa12.97□□□□□ -0.33
USF1-203ENST00000368021 EFCAB13Q8IY85 973 aa12.97□□□□□ -0.33
USF1-203ENST00000368021 FAM212AQ96EL1 285 aa12.97□□□□□ -0.33
USF1-203ENST00000368021 ANKRD36BP1Q96IX9 119 aa12.97□□□□□ -0.33
USF1-203ENST00000368021 KREMEN1Q96MU8 473 aa12.97□□□□□ -0.33
USF1-203ENST00000368021 SEZ6LQ9BYH1 1024 aa12.97□□□□□ -0.33
USF1-203ENST00000368021 MTMR12Q9C0I1 747 aa12.97□□□□□ -0.33
USF1-203ENST00000368021 PLEKHA5Q9HAU0 1116 aa12.97□□□□□ -0.33
USF1-203ENST00000368021 FEZ2Q9UHY8 353 aaPredicted RBP12.97□□□□□ -0.33
USF1-203ENST00000368021 COLQQ9Y215 455 aaPredicted RBP12.97□□□□□ -0.33
USF1-203ENST00000368021 C2CD2Q9Y426 696 aa12.97□□□□□ -0.33
USF1-203ENST00000368021 CDY2AQ9Y6F7 541 aa12.97□□□□□ -0.33
USF1-203ENST00000368021 LACTBL1A8MY62 500 aa12.96□□□□□ -0.33
USF1-203ENST00000368021 ZNF263O14978 683 aa12.96□□□□□ -0.33
USF1-203ENST00000368021 KIAA0355O15063 1070 aa12.96□□□□□ -0.33
USF1-203ENST00000368021 CAND2O75155 1236 aa12.96□□□□□ -0.33
USF1-203ENST00000368021 PHACTR2O75167 634 aa12.96□□□□□ -0.33
USF1-203ENST00000368021 TIMP1P01033 207 aa12.96□□□□□ -0.33
USF1-203ENST00000368021 TNNC2P02585 160 aa12.96□□□□□ -0.33
USF1-203ENST00000368021 TMEM191BP0C7N4 346 aa12.96□□□□□ -0.33
USF1-203ENST00000368021 MGAT3Q09327 533 aa12.96□□□□□ -0.33
USF1-203ENST00000368021 ARHGAP44Q17R89 818 aa12.96□□□□□ -0.33
USF1-203ENST00000368021 SLC10A6Q3KNW5 377 aa12.96□□□□□ -0.33
USF1-203ENST00000368021 ARHGAP29Q52LW3 1261 aa12.96□□□□□ -0.33
USF1-203ENST00000368021 VPS36Q86VN1 386 aa12.96□□□□□ -0.33
USF1-203ENST00000368021 FAM71AQ8IYT1 594 aa12.96□□□□□ -0.33
USF1-203ENST00000368021 SCLYQ96I15 445 aa12.96□□□□□ -0.33
USF1-203ENST00000368021 IMPG2Q9BZV3 1241 aa12.96□□□□□ -0.33
USF1-203ENST00000368021 LUC7LQ9NQ29 371 aaKnown RBP12.96□□□□□ -0.33
USF1-203ENST00000368021 PIN4Q9Y237 131 aaKnown RBP12.96□□□□□ -0.33
USF1-203ENST00000368021 RALGAPA2Q2PPJ7 1873 aa12.96□□□□□ -0.34
USF1-203ENST00000368021 TRIOBPQ9H2D6 2365 aa12.95□□□□□ -0.34
USF1-203ENST00000368021 MEFVO15553 781 aaPredicted RBP12.95□□□□□ -0.34
USF1-203ENST00000368021 NPTXRO95502 500 aa12.95□□□□□ -0.34
USF1-203ENST00000368021 ASS1P00966 412 aaKnown RBP12.95□□□□□ -0.34
USF1-203ENST00000368021 CHRNA1P02708 482 aa12.95□□□□□ -0.34
USF1-203ENST00000368021 TBXAS1P24557 533 aaPredicted RBP12.95□□□□□ -0.34
USF1-203ENST00000368021 VAV2P52735 878 aa12.95□□□□□ -0.34
USF1-203ENST00000368021 ETF1P62495 437 aaKnown RBP12.95□□□□□ -0.34
USF1-203ENST00000368021 TFAMQ00059 246 aaKnown RBP12.95□□□□□ -0.34
USF1-203ENST00000368021 BMS1Q14692 1282 aaKnown RBP12.95□□□□□ -0.34
USF1-203ENST00000368021 ICE2Q659A1 982 aa12.95□□□□□ -0.34
USF1-203ENST00000368021 ZNF571Q7Z3V5 609 aaPredicted RBP12.95□□□□□ -0.34
USF1-203ENST00000368021 FAM228AQ86W67 206 aa12.95□□□□□ -0.34
USF1-203ENST00000368021 TATDN2Q93075 761 aa12.95□□□□□ -0.34
USF1-203ENST00000368021 WNT8BQ93098 351 aa12.95□□□□□ -0.34
USF1-203ENST00000368021 FAXDC2Q96IV6 333 aa12.95□□□□□ -0.34
USF1-203ENST00000368021 FAM84AQ96KN4 292 aa12.95□□□□□ -0.34
USF1-203ENST00000368021 TACO1Q9BSH4 297 aaKnown RBP12.95□□□□□ -0.34
USF1-203ENST00000368021 PI4K2AQ9BTU6 479 aa12.95□□□□□ -0.34
USF1-203ENST00000368021 IFIH1Q9BYX4 1025 aaKnown RBP12.95□□□□□ -0.34
USF1-203ENST00000368021 UBE2OQ9C0C9 1292 aaKnown RBP12.95□□□□□ -0.34
USF1-203ENST00000368021 FAM53CQ9NYF3 392 aa12.95□□□□□ -0.34
USF1-203ENST00000368021 DERAQ9Y315 318 aa12.95□□□□□ -0.34
USF1-203ENST00000368021 SPDYE4A6NLX3 237 aa12.95□□□□□ -0.34
USF1-203ENST00000368021 PNMA6AP0CW24 399 aaPredicted RBP12.95□□□□□ -0.34
USF1-203ENST00000368021 CSF2RAP15509 400 aa12.95□□□□□ -0.34
USF1-203ENST00000368021 ARHGAP25P42331 645 aa12.95□□□□□ -0.34
USF1-203ENST00000368021 NOP14P78316 857 aaKnown RBP12.95□□□□□ -0.34
USF1-203ENST00000368021 CYP27A1Q02318 531 aa12.95□□□□□ -0.34
USF1-203ENST00000368021 GFPT1Q06210 699 aaPredicted RBP12.95□□□□□ -0.34
USF1-203ENST00000368021 SGSM1Q2NKQ1 1148 aa12.95□□□□□ -0.34
USF1-203ENST00000368021 C10orf76Q5T2E6 689 aa12.95□□□□□ -0.34
USF1-203ENST00000368021 KIAA1328Q86T90 577 aa12.95□□□□□ -0.34
USF1-203ENST00000368021 KIF18AQ8NI77 898 aa12.95□□□□□ -0.34
USF1-203ENST00000368021 TAF4BQ92750 862 aa12.95□□□□□ -0.34
USF1-203ENST00000368021 KAT5Q92993 513 aa12.95□□□□□ -0.34
USF1-203ENST00000368021 TSPAN18Q96SJ8 248 aa12.95□□□□□ -0.34
USF1-203ENST00000368021 GDF15Q99988 308 aa12.95□□□□□ -0.34
USF1-203ENST00000368021 SYT11Q9BT88 431 aa12.95□□□□□ -0.34
USF1-203ENST00000368021 EIF2AQ9BY44 585 aaKnown RBP12.95□□□□□ -0.34
USF1-203ENST00000368021 TSGA10Q9BZW7 698 aa12.95□□□□□ -0.34
USF1-203ENST00000368021 TRIM6Q9C030 488 aaPredicted RBP12.95□□□□□ -0.34
USF1-203ENST00000368021 LZTFL1Q9NQ48 299 aa12.95□□□□□ -0.34
USF1-203ENST00000368021 CHST12Q9NRB3 414 aa12.95□□□□□ -0.34
USF1-203ENST00000368021 MYO1AQ9UBC5 1043 aa12.95□□□□□ -0.34
USF1-203ENST00000368021 ADAMTS1Q9UHI8 967 aa12.95□□□□□ -0.34
USF1-203ENST00000368021 NOC2LQ9Y3T9 749 aaKnown RBP12.95□□□□□ -0.34
USF1-203ENST00000368021 PCDHA13Q9Y5I0 950 aa12.95□□□□□ -0.34
USF1-203ENST00000368021 ATP8B3O60423 1300 aa12.94□□□□□ -0.34
USF1-203ENST00000368021 A0A087X0T9 212 aa12.94□□□□□ -0.34
USF1-203ENST00000368021 KRT86O43790 486 aa12.94□□□□□ -0.34
USF1-203ENST00000368021 RPS6KA5O75582 802 aa12.94□□□□□ -0.34
USF1-203ENST00000368021 CST3P01034 146 aaPredicted RBP12.94□□□□□ -0.34
USF1-203ENST00000368021 NFICP08651 508 aa12.94□□□□□ -0.34
USF1-203ENST00000368021 FAM228BP0C875 321 aa12.94□□□□□ -0.34
USF1-203ENST00000368021 ACRP10323 421 aa12.94□□□□□ -0.34
USF1-203ENST00000368021 YARSP54577 528 aaKnown RBP12.94□□□□□ -0.34
USF1-203ENST00000368021 TRPC3Q13507 836 aa12.94□□□□□ -0.34
USF1-203ENST00000368021 CUL2Q13617 745 aa12.94□□□□□ -0.34
USF1-203ENST00000368021 TMEM132DQ14C87 1099 aa12.94□□□□□ -0.34
USF1-203ENST00000368021 TRIM71Q2Q1W2 868 aaKnown RBP12.94□□□□□ -0.34
USF1-203ENST00000368021 FAM26DQ5JW98 314 aa12.94□□□□□ -0.34
USF1-203ENST00000368021 JADE1Q6IE81 842 aa12.94□□□□□ -0.34
USF1-203ENST00000368021 MFSD5Q6N075 450 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms