RNA–Protein interactions for RNA: ENST00000336057.9

HDAC5-202, Transcript of histone deacetylase 5, humanhuman

TSL 1 (best) BASIC

Gene HDAC5, Length 5,040 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-202ENST00000336057 RAB6BQ9NRW1 208 aa16.58■□□□□ 0.24
HDAC5-202ENST00000336057 NDE1Q9NXR1 346 aa16.58■□□□□ 0.24
HDAC5-202ENST00000336057 AGAP1Q9UPQ3 857 aa16.58■□□□□ 0.24
HDAC5-202ENST00000336057 C19orf81C9J6K1 198 aa16.57■□□□□ 0.24
HDAC5-202ENST00000336057 APRTP07741 180 aa16.57■□□□□ 0.24
HDAC5-202ENST00000336057 GZMAP12544 262 aa16.57■□□□□ 0.24
HDAC5-202ENST00000336057 PDE1CQ14123 709 aaPredicted RBP16.57■□□□□ 0.24
HDAC5-202ENST00000336057 SCG3Q8WXD2 468 aaKnown RBP16.57■□□□□ 0.24
HDAC5-202ENST00000336057 FBXO28Q9NVF7 368 aa16.57■□□□□ 0.24
HDAC5-202ENST00000336057 DONSONQ9NYP3 566 aa16.57■□□□□ 0.24
HDAC5-202ENST00000336057 FNDC3AQ9Y2H6 1198 aaKnown RBP16.57■□□□□ 0.24
HDAC5-202ENST00000336057 TYW5A2RUC4 315 aaKnown RBP16.57■□□□□ 0.24
HDAC5-202ENST00000336057 TFRCP02786 760 aaKnown RBP16.57■□□□□ 0.24
HDAC5-202ENST00000336057 TAAR1Q96RJ0 339 aa16.57■□□□□ 0.24
HDAC5-202ENST00000336057 TLR10Q9BXR5 811 aa16.57■□□□□ 0.24
HDAC5-202ENST00000336057 OLFML3Q9NRN5 406 aa16.57■□□□□ 0.24
HDAC5-202ENST00000336057 IL1R1P14778 569 aa16.57■□□□□ 0.24
HDAC5-202ENST00000336057 PAPOLAP51003 745 aaKnown RBP16.57■□□□□ 0.24
HDAC5-202ENST00000336057 KIF22Q14807 665 aa16.57■□□□□ 0.24
HDAC5-202ENST00000336057 ITPRIPL1Q6GPH6 555 aa16.57■□□□□ 0.24
HDAC5-202ENST00000336057 CBWD2Q8IUF1 395 aa16.57■□□□□ 0.24
HDAC5-202ENST00000336057 SLC40A1Q9NP59 571 aa16.57■□□□□ 0.24
HDAC5-202ENST00000336057 ZC3H7BQ9UGR2 993 aaKnown RBP16.57■□□□□ 0.24
HDAC5-202ENST00000336057 ICAM1P05362 532 aa16.57■□□□□ 0.24
HDAC5-202ENST00000336057 HSPA8P11142 646 aaKnown RBP16.57■□□□□ 0.24
HDAC5-202ENST00000336057 DEUP1Q05D60 604 aa16.57■□□□□ 0.24
HDAC5-202ENST00000336057 STILQ15468 1287 aa16.57■□□□□ 0.24
HDAC5-202ENST00000336057 RASSF3Q86WH2 238 aa16.57■□□□□ 0.24
HDAC5-202ENST00000336057 CCNYL1Q8N7R7 359 aa16.57■□□□□ 0.24
HDAC5-202ENST00000336057 ACER1Q8TDN7 264 aa16.57■□□□□ 0.24
HDAC5-202ENST00000336057 RAPGEF5Q92565 580 aa16.57■□□□□ 0.24
HDAC5-202ENST00000336057 OTUD5Q96G74 571 aa16.57■□□□□ 0.24
HDAC5-202ENST00000336057 CBWD1Q9BRT8 395 aa16.57■□□□□ 0.24
HDAC5-202ENST00000336057 BLOC1S4Q9NUP1 217 aa16.57■□□□□ 0.24
HDAC5-202ENST00000336057 ZFATQ9P243 1243 aa16.57■□□□□ 0.24
HDAC5-202ENST00000336057 CHEK2O96017 543 aa16.56■□□□□ 0.24
HDAC5-202ENST00000336057 ARP10275 920 aa16.56■□□□□ 0.24
HDAC5-202ENST00000336057 PGM1P36871 562 aa16.56■□□□□ 0.24
HDAC5-202ENST00000336057 TMEM119Q4V9L6 283 aa16.56■□□□□ 0.24
HDAC5-202ENST00000336057 SYCP2LQ5T4T6 812 aa16.56■□□□□ 0.24
HDAC5-202ENST00000336057 GPAT2Q6NUI2 795 aa16.56■□□□□ 0.24
HDAC5-202ENST00000336057 RGS9BPQ6ZS82 235 aa16.56■□□□□ 0.24
HDAC5-202ENST00000336057 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.56■□□□□ 0.243e-6■■■■■ 36.3
HDAC5-202ENST00000336057 SMAPO00193 183 aa16.56■□□□□ 0.24
HDAC5-202ENST00000336057 CYTH3O43739 400 aa16.56■□□□□ 0.24
HDAC5-202ENST00000336057 CST8O60676 142 aa16.56■□□□□ 0.24
HDAC5-202ENST00000336057 TXNP10599 105 aaKnown RBP16.56■□□□□ 0.24
HDAC5-202ENST00000336057 ARPP19P56211 112 aa16.56■□□□□ 0.24
HDAC5-202ENST00000336057 PSMC6P62333 389 aa16.56■□□□□ 0.24
HDAC5-202ENST00000336057 ZNF200P98182 395 aaPredicted RBP16.56■□□□□ 0.24
HDAC5-202ENST00000336057 NME3Q13232 169 aa16.56■□□□□ 0.24
HDAC5-202ENST00000336057 SLC12A1Q13621 1099 aa16.56■□□□□ 0.24
HDAC5-202ENST00000336057 C3orf62Q6ZUJ4 267 aa16.56■□□□□ 0.24
HDAC5-202ENST00000336057 PID1Q7Z2X4 250 aa16.56■□□□□ 0.24
HDAC5-202ENST00000336057 NIF3L1Q9GZT8 377 aa16.56■□□□□ 0.24
HDAC5-202ENST00000336057 RANBP17Q9H2T7 1088 aaKnown RBP16.56■□□□□ 0.24
HDAC5-202ENST00000336057 ZNF446Q9NWS9 450 aa16.56■□□□□ 0.24
HDAC5-202ENST00000336057 TRAF3IP3Q9Y228 551 aa16.56■□□□□ 0.24
HDAC5-202ENST00000336057 ANKRD26Q9UPS8 1709 aa16.56■□□□□ 0.24
HDAC5-202ENST00000336057 GNGT2O14610 69 aa16.56■□□□□ 0.24
HDAC5-202ENST00000336057 RARGP13631 454 aa16.56■□□□□ 0.24
HDAC5-202ENST00000336057 KRT10P13645 584 aa16.56■□□□□ 0.24
HDAC5-202ENST00000336057 GTF2H1P32780 548 aa16.56■□□□□ 0.24
HDAC5-202ENST00000336057 RBP5P82980 135 aa16.56■□□□□ 0.24
HDAC5-202ENST00000336057 LRRC34Q8IZ02 419 aa16.56■□□□□ 0.24
HDAC5-202ENST00000336057 FBXO25Q8TCJ0 367 aa16.56■□□□□ 0.24
HDAC5-202ENST00000336057 EXT2Q93063 718 aa16.56■□□□□ 0.24
HDAC5-202ENST00000336057 TARS2Q9BW92 718 aaKnown RBP16.56■□□□□ 0.24
HDAC5-202ENST00000336057 GTSE1Q9NYZ3 720 aa16.56■□□□□ 0.24
HDAC5-202ENST00000336057 PIK3R2O00459 728 aa16.56■□□□□ 0.24
HDAC5-202ENST00000336057 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.56■□□□□ 0.24
HDAC5-202ENST00000336057 OSBPL1AQ9BXW6 950 aa16.56■□□□□ 0.24
HDAC5-202ENST00000336057 GNAT1P11488 350 aa16.55■□□□□ 0.24
HDAC5-202ENST00000336057 HNRNPH1P31943 449 aaKnown RBP16.55■□□□□ 0.24
HDAC5-202ENST00000336057 ACTR2P61160 394 aa16.55■□□□□ 0.24
HDAC5-202ENST00000336057 GMCL1P1Q8NEA9 526 aa16.55■□□□□ 0.24
HDAC5-202ENST00000336057 UBN1Q9NPG3 1134 aa16.55■□□□□ 0.24
HDAC5-202ENST00000336057 GPRC5CQ9NQ84 441 aa16.55■□□□□ 0.24
HDAC5-202ENST00000336057 CHMP2BQ9UQN3 213 aa16.55■□□□□ 0.24
HDAC5-202ENST00000336057 INPP5FQ9Y2H2 1132 aa16.55■□□□□ 0.24
HDAC5-202ENST00000336057 MYL3P08590 195 aa16.55■□□□□ 0.24
HDAC5-202ENST00000336057 CYP11B1P15538 503 aa16.55■□□□□ 0.24
HDAC5-202ENST00000336057 STYK1Q6J9G0 422 aa16.55■□□□□ 0.24
HDAC5-202ENST00000336057 EPS8L3Q8TE67 593 aaKnown RBP16.55■□□□□ 0.24
HDAC5-202ENST00000336057 ATP8B4Q8TF62 1192 aa16.55■□□□□ 0.24
HDAC5-202ENST00000336057 HDAC7Q8WUI4 952 aa16.55■□□□□ 0.24
HDAC5-202ENST00000336057 GPRASP2Q96D09 838 aa16.55■□□□□ 0.24
HDAC5-202ENST00000336057 ZNF560Q96MR9 790 aa16.55■□□□□ 0.24
HDAC5-202ENST00000336057 NUDT12Q9BQG2 462 aa16.55■□□□□ 0.24
HDAC5-202ENST00000336057 CYP4F11Q9HBI6 524 aa16.55■□□□□ 0.24
HDAC5-202ENST00000336057 ASB14A6NK59 587 aa16.55■□□□□ 0.24
HDAC5-202ENST00000336057 PJA2O43164 708 aa16.55■□□□□ 0.24
HDAC5-202ENST00000336057 SESN2P58004 480 aaPredicted RBP16.55■□□□□ 0.24
HDAC5-202ENST00000336057 SMAD1Q15797 465 aaKnown RBP16.55■□□□□ 0.24
HDAC5-202ENST00000336057 MICALL2Q8IY33 904 aa16.55■□□□□ 0.24
HDAC5-202ENST00000336057 SPATA18Q8TC71 538 aa16.55■□□□□ 0.24
HDAC5-202ENST00000336057 YIPF3Q9GZM5 350 aa16.55■□□□□ 0.24
HDAC5-202ENST00000336057 SUDS3Q9H7L9 328 aaPredicted RBP16.55■□□□□ 0.24
HDAC5-202ENST00000336057 COL5A2P05997 1499 aaPredicted RBP16.55■□□□□ 0.24
HDAC5-202ENST00000336057 PPP1R12AO14974 1030 aaPredicted RBP16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms