RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 TRAPPC3O43617 180 aa15.14■□□□□ 0.01
DDX39A-201ENST00000242776 MED24O75448 989 aa15.14■□□□□ 0.01
DDX39A-201ENST00000242776 RETP07949 1114 aa15.14■□□□□ 0.01
DDX39A-201ENST00000242776 SPATA31C1P0DKV0 1188 aa15.14■□□□□ 0.01
DDX39A-201ENST00000242776 CXCL12P48061 93 aa15.14■□□□□ 0.01
DDX39A-201ENST00000242776 SOX9P48436 509 aa15.14■□□□□ 0.01
DDX39A-201ENST00000242776 GAS6Q14393 721 aa15.14■□□□□ 0.01
DDX39A-201ENST00000242776 CATSPER3Q86XQ3 398 aa15.14■□□□□ 0.01
DDX39A-201ENST00000242776 MCPH1Q8NEM0 835 aa15.14■□□□□ 0.01
DDX39A-201ENST00000242776 ZNF461Q8TAF7 563 aa15.14■□□□□ 0.01
DDX39A-201ENST00000242776 IRF7Q92985 503 aa15.14■□□□□ 0.01
DDX39A-201ENST00000242776 ASB16Q96NS5 453 aa15.14■□□□□ 0.01
DDX39A-201ENST00000242776 IPO9Q96P70 1041 aaKnown RBP15.14■□□□□ 0.01
DDX39A-201ENST00000242776 CCDC113Q9H0I3 377 aa15.14■□□□□ 0.01
DDX39A-201ENST00000242776 SLITRK6Q9H5Y7 841 aa15.14■□□□□ 0.01
DDX39A-201ENST00000242776 FOXD4L1Q9NU39 408 aa15.14■□□□□ 0.01
DDX39A-201ENST00000242776 INSL5Q9Y5Q6 135 aa15.14■□□□□ 0.01
DDX39A-201ENST00000242776 CITO14578 2027 aa15.13■□□□□ 0.01
DDX39A-201ENST00000242776 ARHGEF37A1IGU5 675 aa15.13■□□□□ 0.01
DDX39A-201ENST00000242776 ARHGEF35A5YM69 484 aa15.13■□□□□ 0.01
DDX39A-201ENST00000242776 TMEM189-UBE2V1I3L0A0 370 aa15.13■□□□□ 0.01
DDX39A-201ENST00000242776 ACKR2O00590 384 aa15.13■□□□□ 0.01
DDX39A-201ENST00000242776 ZNF263O14978 683 aa15.13■□□□□ 0.01
DDX39A-201ENST00000242776 PSMC3P17980 439 aa15.13■□□□□ 0.01
DDX39A-201ENST00000242776 TWF1Q12792 350 aa15.13■□□□□ 0.01
DDX39A-201ENST00000242776 DCAF4L1Q3SXM0 396 aa15.13■□□□□ 0.01
DDX39A-201ENST00000242776 CYP4A22Q5TCH4 519 aa15.13■□□□□ 0.01
DDX39A-201ENST00000242776 NT5DC1Q5TFE4 455 aa15.13■□□□□ 0.01
DDX39A-201ENST00000242776 ATF7IP2Q5U623 682 aa15.13■□□□□ 0.01
DDX39A-201ENST00000242776 PADI6Q6TGC4 694 aa15.13■□□□□ 0.01
DDX39A-201ENST00000242776 Q6ZS52 159 aa15.13■□□□□ 0.01
DDX39A-201ENST00000242776 ZSCAN18Q8TBC5 510 aaPredicted RBP15.13■□□□□ 0.01
DDX39A-201ENST00000242776 TMEM60Q9H2L4 133 aa15.13■□□□□ 0.01
DDX39A-201ENST00000242776 BRMS1Q9HCU9 246 aa15.13■□□□□ 0.01
DDX39A-201ENST00000242776 ATG2BQ96BY7 2078 aa15.13■□□□□ 0.01
DDX39A-201ENST00000242776 CFAP47Q6ZTR5 3102 aa15.13■□□□□ 0.01
DDX39A-201ENST00000242776 SMIM28A0A1B0GU29 152 aa15.12■□□□□ 0.01
DDX39A-201ENST00000242776 SLC38A8A6NNN8 435 aa15.12■□□□□ 0.01
DDX39A-201ENST00000242776 PODXLO00592 558 aa15.12■□□□□ 0.01
DDX39A-201ENST00000242776 ZNF197O14709 1029 aa15.12■□□□□ 0.01
DDX39A-201ENST00000242776 CHRNB1P11230 501 aa15.12■□□□□ 0.01
DDX39A-201ENST00000242776 PDCP20941 246 aa15.12■□□□□ 0.01
DDX39A-201ENST00000242776 KPNA1P52294 538 aaPredicted RBP15.12■□□□□ 0.01
DDX39A-201ENST00000242776 TRIM29Q14134 588 aa15.12■□□□□ 0.01
DDX39A-201ENST00000242776 TEAD2Q15562 447 aa15.12■□□□□ 0.01
DDX39A-201ENST00000242776 CTXN3Q4LDR2 81 aa15.12■□□□□ 0.01
DDX39A-201ENST00000242776 CEP68Q76N32 757 aa15.12■□□□□ 0.01
DDX39A-201ENST00000242776 MAP4K3Q8IVH8 894 aa15.12■□□□□ 0.01
DDX39A-201ENST00000242776 ELMOD1Q8N336 334 aa15.12■□□□□ 0.01
DDX39A-201ENST00000242776 TMEM130Q8N3G9 435 aa15.12■□□□□ 0.01
DDX39A-201ENST00000242776 SPRYD3Q8NCJ5 442 aa15.12■□□□□ 0.01
DDX39A-201ENST00000242776 SMARCD2Q92925 531 aa15.12■□□□□ 0.01
DDX39A-201ENST00000242776 TNFRSF25Q93038 417 aa15.12■□□□□ 0.01
DDX39A-201ENST00000242776 UROC1Q96N76 676 aa15.12■□□□□ 0.01
DDX39A-201ENST00000242776 AVENQ9NQS1 362 aaPredicted RBP15.12■□□□□ 0.01
DDX39A-201ENST00000242776 C2orf42Q9NWW7 574 aa15.12■□□□□ 0.01
DDX39A-201ENST00000242776 CEP72Q9P209 647 aa15.12■□□□□ 0.01
DDX39A-201ENST00000242776 NUB1Q9Y5A7 615 aa15.12■□□□□ 0.01
DDX39A-201ENST00000242776 USP24Q9UPU5 2620 aa15.11■□□□□ 0.01
DDX39A-201ENST00000242776 HEPACAM2A8MVW5 462 aa15.11■□□□□ 0.01
DDX39A-201ENST00000242776 BTBD18B2RXH4 712 aa15.11■□□□□ 0.01
DDX39A-201ENST00000242776 MOSPD3O75425 235 aa15.11■□□□□ 0.01
DDX39A-201ENST00000242776 ABLIM3O94929 683 aa15.11■□□□□ 0.01
DDX39A-201ENST00000242776 HARSP12081 509 aaKnown RBP15.11■□□□□ 0.01
DDX39A-201ENST00000242776 ATF2P15336 505 aa15.11■□□□□ 0.01
DDX39A-201ENST00000242776 MCM7P33993 719 aa15.11■□□□□ 0.01
DDX39A-201ENST00000242776 NAMPTP43490 491 aa15.11■□□□□ 0.01
DDX39A-201ENST00000242776 IQCEQ6IPM2 695 aa15.11■□□□□ 0.01
DDX39A-201ENST00000242776 SLC8B1Q6J4K2 584 aa15.11■□□□□ 0.01
DDX39A-201ENST00000242776 YAF2Q8IY57 180 aa15.11■□□□□ 0.01
DDX39A-201ENST00000242776 CSGALNACT1Q8TDX6 532 aa15.11■□□□□ 0.01
DDX39A-201ENST00000242776 ZNF512Q96ME7 567 aaPredicted RBP15.11■□□□□ 0.01
DDX39A-201ENST00000242776 FBXL5Q9UKA1 691 aa15.11■□□□□ 0.01
DDX39A-201ENST00000242776 AXIN1O15169 862 aa15.1■□□□□ 0.01
DDX39A-201ENST00000242776 XRCC6P12956 609 aaKnown RBP eCLIP15.1■□□□□ 0.01
DDX39A-201ENST00000242776 PDIA4P13667 645 aaKnown RBP15.1■□□□□ 0.01
DDX39A-201ENST00000242776 FDPSP14324 419 aaKnown RBP15.1■□□□□ 0.01
DDX39A-201ENST00000242776 YARSP54577 528 aaKnown RBP15.1■□□□□ 0.01
DDX39A-201ENST00000242776 SF3A2Q15428 464 aaKnown RBP15.1■□□□□ 0.01
DDX39A-201ENST00000242776 CSRP2Q16527 193 aa15.1■□□□□ 0.01
DDX39A-201ENST00000242776 AASDHQ4L235 1098 aaPredicted RBP15.1■□□□□ 0.01
DDX39A-201ENST00000242776 IL31Q6EBC2 164 aa15.1■□□□□ 0.01
DDX39A-201ENST00000242776 RTL10Q7L3V2 364 aa15.1■□□□□ 0.01
DDX39A-201ENST00000242776 FAM160A2Q8N612 972 aaPredicted RBP15.1■□□□□ 0.01
DDX39A-201ENST00000242776 C18orf25Q96B23 403 aaPredicted RBP15.1■□□□□ 0.01
DDX39A-201ENST00000242776 RSPRY1Q96DX4 576 aa15.1■□□□□ 0.01
DDX39A-201ENST00000242776 C8orf76Q96K31 380 aa15.1■□□□□ 0.01
DDX39A-201ENST00000242776 IFT74Q96LB3 600 aa15.1■□□□□ 0.01
DDX39A-201ENST00000242776 ZMAT2Q96NC0 199 aaKnown RBP15.1■□□□□ 0.01
DDX39A-201ENST00000242776 MTMR9Q96QG7 549 aa15.1■□□□□ 0.01
DDX39A-201ENST00000242776 NACC1Q96RE7 527 aa15.1■□□□□ 0.01
DDX39A-201ENST00000242776 TUFT1Q9NNX1 390 aa15.1■□□□□ 0.01
DDX39A-201ENST00000242776 CNOT1A5YKK6 2376 aaKnown RBP15.1■□□□□ 0.01
DDX39A-201ENST00000242776 GREB1Q4ZG55 1949 aa15.1■□□□□ 0.01
DDX39A-201ENST00000242776 H7C4K7 107 aa15.09■□□□□ 0.01
DDX39A-201ENST00000242776 CPB1P15086 417 aa15.09■□□□□ 0.01
DDX39A-201ENST00000242776 CYP11B2P19099 503 aa15.09■□□□□ 0.01
DDX39A-201ENST00000242776 PXNP49023 591 aaPredicted RBP15.09■□□□□ 0.01
DDX39A-201ENST00000242776 CDR1P51861 262 aa15.09■□□□□ 0.01
DDX39A-201ENST00000242776 ZNF568Q3ZCX4 644 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms