RNA–Protein interactions for RNA: ENSMUST00000093196.10

Hmgb1-202, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 1,092 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-202ENSMUST00000093196 Nme8Q715T0 586 aa12.57□□□□□ -0.4
Hmgb1-202ENSMUST00000093196 Pak4Q8BTW9 593 aa12.57□□□□□ -0.4
Hmgb1-202ENSMUST00000093196 Scara5Q8K299 491 aa12.57□□□□□ -0.4
Hmgb1-202ENSMUST00000093196 Sash3Q8K352 380 aa12.57□□□□□ -0.4
Hmgb1-202ENSMUST00000093196 Dhcr24Q8VCH6 516 aaKnown RBP12.57□□□□□ -0.4
Hmgb1-202ENSMUST00000093196 Riok1Q922Q2 567 aa12.57□□□□□ -0.4
Hmgb1-202ENSMUST00000093196 Ddx56Q9D0R4 546 aaKnown RBP12.57□□□□□ -0.4
Hmgb1-202ENSMUST00000093196 Vmn1r65Q9EPS7 332 aa12.57□□□□□ -0.4
Hmgb1-202ENSMUST00000093196 Asah2Q9JHE3 756 aa12.57□□□□□ -0.4
Hmgb1-202ENSMUST00000093196 Akr1a1Q9JII6 325 aa12.57□□□□□ -0.4
Hmgb1-202ENSMUST00000093196 Vmn1r49Q9WUF1 310 aa12.57□□□□□ -0.4
Hmgb1-202ENSMUST00000093196 Cyp4a29A0A087WPC3 509 aa12.56□□□□□ -0.4
Hmgb1-202ENSMUST00000093196 Gpr161B2RPY5 545 aa12.56□□□□□ -0.4
Hmgb1-202ENSMUST00000093196 Tlx3O55144 291 aa12.56□□□□□ -0.4
Hmgb1-202ENSMUST00000093196 Psmc3O88685 442 aa12.56□□□□□ -0.4
Hmgb1-202ENSMUST00000093196 IapP03975 557 aa12.56□□□□□ -0.4
Hmgb1-202ENSMUST00000093196 Syt2P46097 422 aa12.56□□□□□ -0.4
Hmgb1-202ENSMUST00000093196 Tulp2P46686 562 aa12.56□□□□□ -0.4
Hmgb1-202ENSMUST00000093196 Map6d1Q14BB9 191 aa12.56□□□□□ -0.4
Hmgb1-202ENSMUST00000093196 Znf746Q3U133 652 aa12.56□□□□□ -0.4
Hmgb1-202ENSMUST00000093196 Uimc1Q5U5Q9 727 aa12.56□□□□□ -0.4
Hmgb1-202ENSMUST00000093196 Ephx4Q6IE26 359 aa12.56□□□□□ -0.4
Hmgb1-202ENSMUST00000093196 Tacc1Q6Y685 774 aa12.56□□□□□ -0.4
Hmgb1-202ENSMUST00000093196 Asap2Q7SIG6 958 aa12.56□□□□□ -0.4
Hmgb1-202ENSMUST00000093196 Ankfy1Q810B6 1169 aa12.56□□□□□ -0.4
Hmgb1-202ENSMUST00000093196 MtbpQ8BJS8 894 aaKnown RBP12.56□□□□□ -0.4
Hmgb1-202ENSMUST00000093196 Edem2Q8BJT9 577 aa12.56□□□□□ -0.4
Hmgb1-202ENSMUST00000093196 MaobQ8BW75 520 aa12.56□□□□□ -0.4
Hmgb1-202ENSMUST00000093196 Nrbp1Q99J45 535 aa12.56□□□□□ -0.4
Hmgb1-202ENSMUST00000093196 CtsfQ9R013 462 aa12.56□□□□□ -0.4
Hmgb1-202ENSMUST00000093196 Igfn1Q3KNY0 2849 aa12.55□□□□□ -0.4
Hmgb1-202ENSMUST00000093196 Gm36210A0A1B0GS00 229 aa12.55□□□□□ -0.4
Hmgb1-202ENSMUST00000093196 R3hdmlA2A5I3 253 aa12.55□□□□□ -0.4
Hmgb1-202ENSMUST00000093196 Ppfia4B8QI36 1187 aa12.55□□□□□ -0.4
Hmgb1-202ENSMUST00000093196 Olfr67F8VPJ8 320 aa12.55□□□□□ -0.4
Hmgb1-202ENSMUST00000093196 Pde8aO88502 823 aa12.55□□□□□ -0.4
Hmgb1-202ENSMUST00000093196 Adcy5P84309 1262 aa12.55□□□□□ -0.4
Hmgb1-202ENSMUST00000093196 Echdc2Q3TLP5 296 aa12.55□□□□□ -0.4
Hmgb1-202ENSMUST00000093196 Trpc6Q61143 930 aa12.55□□□□□ -0.4
Hmgb1-202ENSMUST00000093196 SvopQ8BFT9 548 aa12.55□□□□□ -0.4
Hmgb1-202ENSMUST00000093196 Vgll2Q8BGW8 322 aa12.55□□□□□ -0.4
Hmgb1-202ENSMUST00000093196 Zfp120Q8BZW4 436 aa12.55□□□□□ -0.4
Hmgb1-202ENSMUST00000093196 Spink10Q8CAC8 162 aa12.55□□□□□ -0.4
Hmgb1-202ENSMUST00000093196 Acap1Q8K2H4 740 aa12.55□□□□□ -0.4
Hmgb1-202ENSMUST00000093196 Gprc5cQ8K3J9 440 aa12.55□□□□□ -0.4
Hmgb1-202ENSMUST00000093196 Zdhhc1Q8R0N9 484 aa12.55□□□□□ -0.4
Hmgb1-202ENSMUST00000093196 Nol6Q8R5K4 1152 aaKnown RBP12.55□□□□□ -0.4
Hmgb1-202ENSMUST00000093196 Prr23a3Q9CWP9 254 aa12.55□□□□□ -0.4
Hmgb1-202ENSMUST00000093196 Lmx1aQ9JKU8 382 aa12.55□□□□□ -0.4
Hmgb1-202ENSMUST00000093196 Git2Q9JLQ2 708 aa12.55□□□□□ -0.4
Hmgb1-202ENSMUST00000093196 Dach1Q9QYB2 751 aa12.55□□□□□ -0.4
Hmgb1-202ENSMUST00000093196 Taf1Q80UV9 1891 aa12.55□□□□□ -0.4
Hmgb1-202ENSMUST00000093196 Ubr5Q80TP3 2792 aa12.54□□□□□ -0.4
Hmgb1-202ENSMUST00000093196 Gstp3F6RWR5 210 aa12.54□□□□□ -0.4
Hmgb1-202ENSMUST00000093196 Ptch2O35595 1182 aa12.54□□□□□ -0.4
Hmgb1-202ENSMUST00000093196 Pabpc1P29341 636 aaKnown RBP12.54□□□□□ -0.4
Hmgb1-202ENSMUST00000093196 Klf1P46099 358 aa12.54□□□□□ -0.4
Hmgb1-202ENSMUST00000093196 Upf3aQ3ULJ3 422 aa12.54□□□□□ -0.4
Hmgb1-202ENSMUST00000093196 Hepacam2Q4VAH7 463 aa12.54□□□□□ -0.4
Hmgb1-202ENSMUST00000093196 Glra4Q61603 456 aa12.54□□□□□ -0.4
Hmgb1-202ENSMUST00000093196 Ssr4Q62186 172 aa12.54□□□□□ -0.4
Hmgb1-202ENSMUST00000093196 Krt87Q6IMF0 495 aa12.54□□□□□ -0.4
Hmgb1-202ENSMUST00000093196 Fez2Q6TYB5 348 aa12.54□□□□□ -0.4
Hmgb1-202ENSMUST00000093196 Sox11Q7M6Y2 395 aa12.54□□□□□ -0.4
Hmgb1-202ENSMUST00000093196 Calcoco1Q8CGU1 691 aa12.54□□□□□ -0.4
Hmgb1-202ENSMUST00000093196 Lman1Q9D0F3 517 aa12.54□□□□□ -0.4
Hmgb1-202ENSMUST00000093196 1700069L16RikQ9D9H5 109 aa12.54□□□□□ -0.4
Hmgb1-202ENSMUST00000093196 Nif3l1Q9EQ80 376 aa12.54□□□□□ -0.4
Hmgb1-202ENSMUST00000093196 Jam2Q9JI59 298 aa12.54□□□□□ -0.4
Hmgb1-202ENSMUST00000093196 Aox3G3X982 1335 aa12.54□□□□□ -0.4
Hmgb1-202ENSMUST00000093196 Ulk4Q3V129 1303 aa12.54□□□□□ -0.4
Hmgb1-202ENSMUST00000093196 C2cd3Q52KB6 2323 aa12.53□□□□□ -0.4
Hmgb1-202ENSMUST00000093196 AcacaQ5SWU9 2345 aa12.53□□□□□ -0.4
Hmgb1-202ENSMUST00000093196 A0A1W2P6Q8 802 aa12.53□□□□□ -0.4
Hmgb1-202ENSMUST00000093196 Gm9048A0A1W2P7H4 802 aa12.53□□□□□ -0.4
Hmgb1-202ENSMUST00000093196 A0A1W2P7Z8 802 aa12.53□□□□□ -0.4
Hmgb1-202ENSMUST00000093196 Gm9046A0A1W2P855 802 aa12.53□□□□□ -0.4
Hmgb1-202ENSMUST00000093196 Kcnt2D3Z649 1135 aa12.53□□□□□ -0.4
Hmgb1-202ENSMUST00000093196 BC051665E9Q623 330 aa12.53□□□□□ -0.4
Hmgb1-202ENSMUST00000093196 Grap2O89100 322 aa12.53□□□□□ -0.4
Hmgb1-202ENSMUST00000093196 Snap25P60879 206 aa12.53□□□□□ -0.4
Hmgb1-202ENSMUST00000093196 Vps45P97390 570 aa12.53□□□□□ -0.4
Hmgb1-202ENSMUST00000093196 Ppm1hQ3UYC0 513 aa12.53□□□□□ -0.4
Hmgb1-202ENSMUST00000093196 Ephx3Q3V1F8 367 aa12.53□□□□□ -0.4
Hmgb1-202ENSMUST00000093196 ManeaQ6NXH2 462 aa12.53□□□□□ -0.4
Hmgb1-202ENSMUST00000093196 Kif2bQ8C0N1 668 aa12.53□□□□□ -0.4
Hmgb1-202ENSMUST00000093196 Dnttip2Q8R2M2 758 aaKnown RBP12.53□□□□□ -0.4
Hmgb1-202ENSMUST00000093196 Atp2a1Q8R429 994 aa12.53□□□□□ -0.4
Hmgb1-202ENSMUST00000093196 Dnajc28Q8VCE1 385 aa12.53□□□□□ -0.4
Hmgb1-202ENSMUST00000093196 Mcrs1Q99L90 462 aa12.53□□□□□ -0.4
Hmgb1-202ENSMUST00000093196 Cadm3Q99N28 396 aa12.53□□□□□ -0.4
Hmgb1-202ENSMUST00000093196 Arhgef25Q9CWR0 618 aa12.53□□□□□ -0.4
Hmgb1-202ENSMUST00000093196 Glod5Q9D8I3 148 aa12.53□□□□□ -0.4
Hmgb1-202ENSMUST00000093196 Notch2O35516 2470 aa12.53□□□□□ -0.4
Hmgb1-202ENSMUST00000093196 Cacna1dQ99246 2179 aa12.52□□□□□ -0.4
Hmgb1-202ENSMUST00000093196 Per1O35973 1291 aa12.52□□□□□ -0.41
Hmgb1-202ENSMUST00000093196 PlauP06869 433 aa12.52□□□□□ -0.41
Hmgb1-202ENSMUST00000093196 MpoP11247 718 aa12.52□□□□□ -0.41
Hmgb1-202ENSMUST00000093196 Aco1P28271 889 aaKnown RBP12.52□□□□□ -0.41
Hmgb1-202ENSMUST00000093196 Nlrp1aQ2LKU9 1182 aa12.52□□□□□ -0.41
Retrieved 100 of 22,080 RNA–protein pairs in 44.5 ms