Protein–RNA interactions for Protein: Q7M6Y2

Sox11, Transcription factor SOX-11, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox11Q7M6Y2 Gm25239-201ENSMUST00000174915 86 ntBASIC39.64■■■■□ 3.94
Sox11Q7M6Y2 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC36.8■■■■□ 3.48
Sox11Q7M6Y2 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC36.32■■■■□ 3.4
Sox11Q7M6Y2 Gm24109-201ENSMUST00000175489 103 ntBASIC34.52■■■■□ 3.12
Sox11Q7M6Y2 Gm15042-201ENSMUST00000120212 883 ntBASIC34.3■■■■□ 3.08
Sox11Q7M6Y2 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC33.54■■■□□ 2.96
Sox11Q7M6Y2 Gm15045-201ENSMUST00000117359 883 ntBASIC33.47■■■□□ 2.95
Sox11Q7M6Y2 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC33.47■■■□□ 2.95
Sox11Q7M6Y2 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC33.42■■■□□ 2.94
Sox11Q7M6Y2 Gm23366-201ENSMUST00000175022 89 ntBASIC33.1■■■□□ 2.89
Sox11Q7M6Y2 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC32.93■■■□□ 2.86
Sox11Q7M6Y2 AC153911.1-202ENSMUST00000218534 1034 ntBASIC32.29■■■□□ 2.76
Sox11Q7M6Y2 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
Sox11Q7M6Y2 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
Sox11Q7M6Y2 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC32.02■■■□□ 2.72
Sox11Q7M6Y2 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
Sox11Q7M6Y2 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC31.97■■■□□ 2.71
Sox11Q7M6Y2 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC31.8■■■□□ 2.68
Sox11Q7M6Y2 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
Sox11Q7M6Y2 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
Sox11Q7M6Y2 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
Sox11Q7M6Y2 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC31.5■■■□□ 2.63
Sox11Q7M6Y2 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
Sox11Q7M6Y2 Gm25238-201ENSMUST00000174914 89 ntBASIC31.4■■■□□ 2.62
Sox11Q7M6Y2 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC31.12■■■□□ 2.57
Sox11Q7M6Y2 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
Sox11Q7M6Y2 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
Sox11Q7M6Y2 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC30.88■■■□□ 2.53
Sox11Q7M6Y2 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC30.86■■■□□ 2.53
Sox11Q7M6Y2 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
Sox11Q7M6Y2 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC30.78■■■□□ 2.52
Sox11Q7M6Y2 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
Sox11Q7M6Y2 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC30.65■■■□□ 2.5
Sox11Q7M6Y2 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
Sox11Q7M6Y2 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC30.5■■■□□ 2.47
Sox11Q7M6Y2 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC30.48■■■□□ 2.47
Sox11Q7M6Y2 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC30.44■■■□□ 2.46
Sox11Q7M6Y2 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC30.43■■■□□ 2.46
Sox11Q7M6Y2 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
Sox11Q7M6Y2 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC30.35■■■□□ 2.45
Sox11Q7M6Y2 Psd-208ENSMUST00000224556 2034 ntBASIC30.34■■■□□ 2.45
Sox11Q7M6Y2 Gm25262-201ENSMUST00000174934 133 ntBASIC30.31■■■□□ 2.44
Sox11Q7M6Y2 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
Sox11Q7M6Y2 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC30.11■■■□□ 2.41
Sox11Q7M6Y2 Gm27325-201ENSMUST00000175467 74 ntBASIC30.01■■■□□ 2.39
Sox11Q7M6Y2 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
Sox11Q7M6Y2 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC29.97■■■□□ 2.39
Sox11Q7M6Y2 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
Sox11Q7M6Y2 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC29.76■■■□□ 2.35
Sox11Q7M6Y2 Rab21-202ENSMUST00000218831 843 ntBASIC29.73■■■□□ 2.35
Sox11Q7M6Y2 Gm26115-201ENSMUST00000175605 87 ntBASIC29.71■■■□□ 2.35
Sox11Q7M6Y2 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC29.69■■■□□ 2.34
Sox11Q7M6Y2 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC29.68■■■□□ 2.34
Sox11Q7M6Y2 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC29.67■■■□□ 2.34
Sox11Q7M6Y2 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC29.66■■■□□ 2.34
Sox11Q7M6Y2 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
Sox11Q7M6Y2 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC29.59■■■□□ 2.33
Sox11Q7M6Y2 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
Sox11Q7M6Y2 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
Sox11Q7M6Y2 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
Sox11Q7M6Y2 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC29.52■■■□□ 2.32
Sox11Q7M6Y2 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
Sox11Q7M6Y2 Gm8109-201ENSMUST00000194076 746 ntBASIC29.42■■■□□ 2.3
Sox11Q7M6Y2 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
Sox11Q7M6Y2 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC29.32■■■□□ 2.28
Sox11Q7M6Y2 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC29.28■■■□□ 2.28
Sox11Q7M6Y2 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC29.25■■■□□ 2.27
Sox11Q7M6Y2 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC29.14■■■□□ 2.26
Sox11Q7M6Y2 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC29.08■■■□□ 2.25
Sox11Q7M6Y2 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC29.06■■■□□ 2.24
Sox11Q7M6Y2 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC29.03■■■□□ 2.24
Sox11Q7M6Y2 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
Sox11Q7M6Y2 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
Sox11Q7M6Y2 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC29■■■□□ 2.23
Sox11Q7M6Y2 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC28.98■■■□□ 2.23
Sox11Q7M6Y2 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
Sox11Q7M6Y2 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
Sox11Q7M6Y2 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
Sox11Q7M6Y2 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC28.83■■■□□ 2.21
Sox11Q7M6Y2 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC28.81■■■□□ 2.2
Sox11Q7M6Y2 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC28.78■■■□□ 2.2
Sox11Q7M6Y2 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC28.78■■■□□ 2.2
Sox11Q7M6Y2 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC28.77■■■□□ 2.2
Sox11Q7M6Y2 Gm17082-201ENSMUST00000166043 1091 ntBASIC28.74■■■□□ 2.19
Sox11Q7M6Y2 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC28.73■■■□□ 2.19
Sox11Q7M6Y2 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
Sox11Q7M6Y2 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
Sox11Q7M6Y2 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
Sox11Q7M6Y2 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
Sox11Q7M6Y2 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC28.59■■■□□ 2.17
Sox11Q7M6Y2 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC28.53■■■□□ 2.16
Sox11Q7M6Y2 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC28.52■■■□□ 2.16
Sox11Q7M6Y2 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
Sox11Q7M6Y2 Gm24804-201ENSMUST00000174982 85 ntBASIC28.51■■■□□ 2.15
Sox11Q7M6Y2 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC28.51■■■□□ 2.15
Sox11Q7M6Y2 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC28.46■■■□□ 2.15
Sox11Q7M6Y2 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC28.46■■■□□ 2.15
Sox11Q7M6Y2 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC28.44■■■□□ 2.14
Sox11Q7M6Y2 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC28.42■■■□□ 2.14
Sox11Q7M6Y2 Gm27322-201ENSMUST00000184007 104 ntBASIC28.42■■■□□ 2.14
Retrieved 100 of 76,532 protein–RNA pairs in 627.2 ms