RNA–Protein interactions for RNA: YOR316C

COT1, Transcript of Vacuolar transporter that mediates zinc transport into the vacuole, yeast

Gene COT1, Length 1,320 nt, Biotype protein coding, Subcellular localisation Mitochondria, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
COT1	YOR316C	YKR015C	P36111	568 aa		4.21	□□□□□ -1.73
COT1	YOR316C	APL3	P38065	1025 aa		4.21	□□□□□ -1.73
COT1	YOR316C	YBR063C	P38083	404 aa		4.21	□□□□□ -1.73
COT1	YOR316C	FMP23	P38231	175 aa		4.21	□□□□□ -1.73
COT1	YOR316C	NVJ1	P38881	321 aa		4.21	□□□□□ -1.73
COT1	YOR316C	YER084W	P40057	128 aa		4.21	□□□□□ -1.73
COT1	YOR316C	AVT6	P40074	448 aa		4.21	□□□□□ -1.73
COT1	YOR316C	FMC1	P40491	155 aa		4.21	□□□□□ -1.73
COT1	YOR316C	PAU12	P53343	120 aa		4.21	□□□□□ -1.73
COT1	YOR316C	OCA2	P53949	197 aa		4.21	□□□□□ -1.73
COT1	YOR316C	SED1	Q01589	338 aa		4.21	□□□□□ -1.73
COT1	YOR316C	GRX5	Q02784	150 aa		4.21	□□□□□ -1.73
COT1	YOR316C	RKM1	Q08961	583 aa	Predicted RBP	4.21	□□□□□ -1.73
COT1	YOR316C	INP53	Q12271	1107 aa		4.21	□□□□□ -1.73
COT1	YOR316C	MCT1	Q12283	360 aa		4.21	□□□□□ -1.73
COT1	YOR316C	YPR1	Q12458	312 aa		4.21	□□□□□ -1.73
COT1	YOR316C	COX9	P07255	59 aa		4.21	□□□□□ -1.74
COT1	YOR316C	STE18	P18852	110 aa		4.21	□□□□□ -1.74
COT1	YOR316C	SAG1	P20840	650 aa		4.21	□□□□□ -1.74
COT1	YOR316C	PUT3	P25502	979 aa	Predicted RBP	4.21	□□□□□ -1.74
COT1	YOR316C	FUN26	P31381	517 aa		4.21	□□□□□ -1.74
COT1	YOR316C	SPT10	P35208	640 aa		4.21	□□□□□ -1.74
COT1	YOR316C	PRY2	P36110	329 aa		4.21	□□□□□ -1.74
COT1	YOR316C	SRL3	P36167	246 aa		4.21	□□□□□ -1.74
COT1	YOR316C	IMD2	P38697	523 aa	Known RBP	4.21	□□□□□ -1.74
COT1	YOR316C	YER121W	P40076	114 aa		4.21	□□□□□ -1.74
COT1	YOR316C	PMT6	P42934	759 aa		4.21	□□□□□ -1.74
COT1	YOR316C	SAY1	P53324	424 aa		4.21	□□□□□ -1.74
COT1	YOR316C	NRK1	P53915	240 aa		4.21	□□□□□ -1.74
COT1	YOR316C	SAM50	P53969	484 aa		4.21	□□□□□ -1.74
COT1	YOR316C	PLP1	Q04004	230 aa		4.21	□□□□□ -1.74
COT1	YOR316C	YDR391C	Q04170	232 aa		4.21	□□□□□ -1.74
COT1	YOR316C	GAL83	Q04739	417 aa		4.21	□□□□□ -1.74
COT1	YOR316C	IZH3	Q07959	543 aa		4.21	□□□□□ -1.74
COT1	YOR316C	CSI2	Q08054	341 aa		4.21	□□□□□ -1.74
COT1	YOR316C	TDH3	P00359	332 aa	Known RBP RIP-Chip data	4.2	□□□□□ -1.74	not detected
COT1	YOR316C	KIN28	P06242	306 aa		4.2	□□□□□ -1.74
COT1	YOR316C	ARG80	P07249	177 aa		4.2	□□□□□ -1.74
COT1	YOR316C	CNE1	P27825	502 aa		4.2	□□□□□ -1.74
COT1	YOR316C	VMA11	P32842	164 aa		4.2	□□□□□ -1.74
COT1	YOR316C	FRM2	P37261	193 aa		4.2	□□□□□ -1.74
COT1	YOR316C	PAU24	P38155	120 aa		4.2	□□□□□ -1.74
COT1	YOR316C	DLS1	P40366	167 aa		4.2	□□□□□ -1.74
COT1	YOR316C	YGL204C	P53089	101 aa		4.2	□□□□□ -1.74
COT1	YOR316C	YGL185C	P53100	379 aa		4.2	□□□□□ -1.74
COT1	YOR316C	GPI17	Q04080	534 aa		4.2	□□□□□ -1.74
COT1	YOR316C	RRG8	Q06109	277 aa		4.2	□□□□□ -1.74
COT1	YOR316C	USB1	Q12208	290 aa	Known RBP	4.2	□□□□□ -1.74
COT1	YOR316C	YGR035W-A	Q45U48	73 aa		4.2	□□□□□ -1.74
COT1	YOR316C	FSH3	Q99369	266 aa		4.2	□□□□□ -1.74
COT1	YOR316C	RPN13	O13563	156 aa		4.19	□□□□□ -1.74
COT1	YOR316C	QCR7	P00128	127 aa		4.19	□□□□□ -1.74
COT1	YOR316C	COX5B	P00425	151 aa		4.19	□□□□□ -1.74
COT1	YOR316C	DSF1	P0CX08	502 aa		4.19	□□□□□ -1.74
COT1	YOR316C	YNR073C	P0CX09	502 aa		4.19	□□□□□ -1.74
COT1	YOR316C	MRP1	P10662	321 aa	Known RBP	4.19	□□□□□ -1.74
COT1	YOR316C	PRE7	P23724	241 aa	Known RBP	4.19	□□□□□ -1.74
COT1	YOR316C	CLB6	P32943	380 aa		4.19	□□□□□ -1.74
COT1	YOR316C	RCN1	P36054	211 aa		4.19	□□□□□ -1.74
COT1	YOR316C	FLO10	P36170	1169 aa		4.19	□□□□□ -1.74
COT1	YOR316C	MIT1	P40002	666 aa		4.19	□□□□□ -1.74
COT1	YOR316C	TIR3	P40552	269 aa		4.19	□□□□□ -1.74
COT1	YOR316C	YAE1	P47118	141 aa	Predicted RBP	4.19	□□□□□ -1.74
COT1	YOR316C	YNR048W	P53740	393 aa		4.19	□□□□□ -1.74
COT1	YOR316C	YLR152C	P54072	576 aa		4.19	□□□□□ -1.74
COT1	YOR316C	PEX30	Q06169	523 aa		4.19	□□□□□ -1.74
COT1	YOR316C	GPN3	Q06543	272 aa		4.19	□□□□□ -1.74
COT1	YOR316C	ARR2	Q06597	130 aa		4.19	□□□□□ -1.74
COT1	YOR316C	FIT3	Q08907	204 aa		4.19	□□□□□ -1.74
COT1	YOR316C	PET494	P07390	489 aa	Predicted RBP	4.18	□□□□□ -1.74
COT1	YOR316C	RPS23A	P0CX29	145 aa	Known RBP	4.18	□□□□□ -1.74
COT1	YOR316C	RPS23B	P0CX30	145 aa		4.18	□□□□□ -1.74
COT1	YOR316C	MATALPHA1	P0CY06	175 aa		4.18	□□□□□ -1.74
COT1	YOR316C	HMLALPHA1	P0CY07	175 aa		4.18	□□□□□ -1.74
COT1	YOR316C	LAC1	P28496	418 aa		4.18	□□□□□ -1.74
COT1	YOR316C	ECM25	P32525	599 aa		4.18	□□□□□ -1.74
COT1	YOR316C	PAU2	P32612	120 aa		4.18	□□□□□ -1.74
COT1	YOR316C	SFK1	P35735	353 aa		4.18	□□□□□ -1.74
COT1	YOR316C	SHE2	P36068	246 aa	Known RBP RIP-Chip data	4.18	□□□□□ -1.74	not detected
COT1	YOR316C	SYG1	P40528	902 aa		4.18	□□□□□ -1.74
COT1	YOR316C	YJL016W	P47072	561 aa		4.18	□□□□□ -1.74
COT1	YOR316C	RIB4	P50861	169 aa	Predicted RBP	4.18	□□□□□ -1.74
COT1	YOR316C	UBC13	P52490	153 aa		4.18	□□□□□ -1.74
COT1	YOR316C	PMT5	P52867	743 aa		4.18	□□□□□ -1.74
COT1	YOR316C	YNL046W	P53956	172 aa		4.18	□□□□□ -1.74
COT1	YOR316C	HHT1	P61830	136 aa		4.18	□□□□□ -1.74
COT1	YOR316C	MRPS17	Q03246	237 aa	Predicted RBP	4.18	□□□□□ -1.74
COT1	YOR316C	MAK3	Q03503	176 aa		4.18	□□□□□ -1.74
COT1	YOR316C	TDA1	Q03533	586 aa		4.18	□□□□□ -1.74
COT1	YOR316C	CAB5	Q03941	241 aa		4.18	□□□□□ -1.74
COT1	YOR316C	SNA4	Q07549	140 aa		4.18	□□□□□ -1.74
COT1	YOR316C	RRS1	Q08746	203 aa	Known RBP	4.18	□□□□□ -1.74
COT1	YOR316C	FRE8	Q12209	686 aa		4.18	□□□□□ -1.74
COT1	YOR316C	YEL009C-A	A0A023PZF2	135 aa		4.17	□□□□□ -1.74
COT1	YOR316C	YER190C-B	P0CX94	160 aa		4.17	□□□□□ -1.74
COT1	YOR316C	YEL077W-A	P0CX95	160 aa		4.17	□□□□□ -1.74
COT1	YOR316C	YGR296C-B	P0CX96	160 aa		4.17	□□□□□ -1.74
COT1	YOR316C	YPL283W-B	P0CX97	160 aa		4.17	□□□□□ -1.74
COT1	YOR316C	YPR204C-A	P0CX98	160 aa		4.17	□□□□□ -1.74
COT1	YOR316C	YFL068W	P0CX99	160 aa		4.17	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 16.9 ms