RNA–Protein interactions for RNA: YKR043C

SHB17, Transcript of Sedoheptulose bisphosphatase involved in riboneogenesis, yeastyeast

Gene SHB17, Length 816 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHB17YKR043C CAT5P41735 233 aa8.49□□□□□ -1.05
SHB17YKR043C IRC18P47056 224 aa8.49□□□□□ -1.05
SHB17YKR043C HNT2P49775 206 aa8.49□□□□□ -1.05
SHB17YKR043C RAI1P53063 387 aaKnown RBP8.49□□□□□ -1.05
SHB17YKR043C WSC2P53832 503 aa8.49□□□□□ -1.05
SHB17YKR043C RFM1Q12192 310 aa8.49□□□□□ -1.05
SHB17YKR043C EDS1P38073 919 aa8.48□□□□□ -1.05
SHB17YKR043C SWD3P38123 315 aa8.48□□□□□ -1.05
SHB17YKR043C MIT1P40002 666 aa8.48□□□□□ -1.05
SHB17YKR043C FCY21P40039 528 aa8.48□□□□□ -1.05
SHB17YKR043C OKP1P53298 406 aa8.48□□□□□ -1.05
SHB17YKR043C RIM9Q04734 239 aa8.48□□□□□ -1.05
SHB17YKR043C YMR317WQ04893 1140 aa8.48□□□□□ -1.05
SHB17YKR043C URA2P07259 2214 aaKnown RBP8.48□□□□□ -1.05
SHB17YKR043C AAC1P04710 309 aa8.47□□□□□ -1.05
SHB17YKR043C GDH1P07262 454 aaKnown RBP8.47□□□□□ -1.05
SHB17YKR043C RPL3P14126 387 aaKnown RBP8.47□□□□□ -1.05
SHB17YKR043C ATP10P18496 279 aa8.47□□□□□ -1.05
SHB17YKR043C IFM1P25038 676 aa8.47□□□□□ -1.05
SHB17YKR043C OCH1P31755 480 aa8.47□□□□□ -1.05
SHB17YKR043C MSS1P32559 526 aaPredicted RBP8.47□□□□□ -1.05
SHB17YKR043C ISC10P32645 267 aa8.47□□□□□ -1.05
SHB17YKR043C ALG14P38242 237 aa8.47□□□□□ -1.05
SHB17YKR043C IPI1P38803 334 aaPredicted RBP8.47□□□□□ -1.05
SHB17YKR043C HPA3P39979 161 aa8.47□□□□□ -1.05
SHB17YKR043C HSK3P69852 69 aa8.47□□□□□ -1.05
SHB17YKR043C RPL21AQ02753 160 aaKnown RBP8.47□□□□□ -1.05
SHB17YKR043C ECM18Q04623 453 aa8.47□□□□□ -1.05
SHB17YKR043C VAM3Q12241 283 aa8.47□□□□□ -1.05
SHB17YKR043C RPL21BQ12672 160 aaKnown RBP8.47□□□□□ -1.05
SHB17YKR043C CDC34P14682 295 aa8.46□□□□□ -1.06
SHB17YKR043C ATG22P25568 528 aa8.46□□□□□ -1.06
SHB17YKR043C TCA17P32613 152 aa8.46□□□□□ -1.06
SHB17YKR043C SWD2P36104 329 aaPredicted RBP8.46□□□□□ -1.06
SHB17YKR043C NTC20P38302 140 aaPredicted RBP8.46□□□□□ -1.06
SHB17YKR043C PET100P38958 111 aa8.46□□□□□ -1.06
SHB17YKR043C YER188WP40103 239 aa8.46□□□□□ -1.06
SHB17YKR043C YOR192C-CQ3E736 78 aa8.46□□□□□ -1.06
SHB17YKR043C ACH1P32316 526 aa8.45□□□□□ -1.06
SHB17YKR043C YHR122WP38829 231 aa8.45□□□□□ -1.06
SHB17YKR043C MSE1P48525 536 aa8.45□□□□□ -1.06
SHB17YKR043C ARO8P53090 500 aaKnown RBP8.45□□□□□ -1.06
SHB17YKR043C FIT1Q04433 528 aa8.45□□□□□ -1.06
SHB17YKR043C YLR031WQ07978 186 aa8.45□□□□□ -1.06
SHB17YKR043C URA3P03962 267 aa8.44□□□□□ -1.06
SHB17YKR043C PUP1P25043 261 aa8.44□□□□□ -1.06
SHB17YKR043C SPT14P32363 452 aa8.44□□□□□ -1.06
SHB17YKR043C RNP1P32385 249 aa8.44□□□□□ -1.06
SHB17YKR043C SOR1P35497 357 aaKnown RBP8.44□□□□□ -1.06
SHB17YKR043C PAC2P39937 518 aa8.44□□□□□ -1.06
SHB17YKR043C DIE2P50076 525 aa8.44□□□□□ -1.06
SHB17YKR043C YGL114WP53134 725 aa8.44□□□□□ -1.06
SHB17YKR043C SOR2Q07786 357 aa8.44□□□□□ -1.06
SHB17YKR043C YOL118CQ08259 102 aa8.44□□□□□ -1.06
SHB17YKR043C YPL199CQ08954 240 aa8.44□□□□□ -1.06
SHB17YKR043C RPB7P34087 171 aa8.43□□□□□ -1.06
SHB17YKR043C CPR5P35176 225 aa8.43□□□□□ -1.06
SHB17YKR043C YBR197CP38306 217 aa8.43□□□□□ -1.06
SHB17YKR043C AIR1P40507 360 aaKnown RBP8.43□□□□□ -1.06
SHB17YKR043C YFL015CP43578 164 aa8.43□□□□□ -1.06
SHB17YKR043C YJR011CP47086 261 aaPredicted RBP8.43□□□□□ -1.06
SHB17YKR043C TTI2P47168 421 aa8.43□□□□□ -1.06
SHB17YKR043C YGL262WP53054 175 aa8.43□□□□□ -1.06
SHB17YKR043C TY1A-MR1Q04215 440 aa8.43□□□□□ -1.06
SHB17YKR043C NOC4Q06512 552 aaPredicted RBP8.43□□□□□ -1.06
SHB17YKR043C ARR2Q06597 130 aa8.43□□□□□ -1.06
SHB17YKR043C BBP1Q12365 385 aa8.43□□□□□ -1.06
SHB17YKR043C CYC1P00044 109 aaPredicted RBP8.42□□□□□ -1.06
SHB17YKR043C STF2P16965 84 aa8.42□□□□□ -1.06
SHB17YKR043C FMT1P32785 401 aa8.42□□□□□ -1.06
SHB17YKR043C MRPL27P36526 146 aaPredicted RBP8.42□□□□□ -1.06
SHB17YKR043C SOL1P50278 321 aa8.42□□□□□ -1.06
SHB17YKR043C ADH6Q04894 360 aaKnown RBP8.42□□□□□ -1.06
SHB17YKR043C YDR286CQ05530 114 aa8.42□□□□□ -1.06
SHB17YKR043C ADH5P38113 351 aaKnown RBP8.41□□□□□ -1.06
SHB17YKR043C PIC2P40035 300 aa8.41□□□□□ -1.06
SHB17YKR043C PRM5P40476 318 aa8.41□□□□□ -1.06
SHB17YKR043C TPN1P53099 579 aa8.41□□□□□ -1.06
SHB17YKR043C SLX9P53251 210 aaPredicted RBP8.41□□□□□ -1.06
SHB17YKR043C ALG9P53868 555 aaKnown RBP8.41□□□□□ -1.06
SHB17YKR043C TIM11P81449 96 aaPredicted RBP8.41□□□□□ -1.06
SHB17YKR043C COA4Q05809 96 aa8.41□□□□□ -1.06
SHB17YKR043C FUS3P16892 353 aaKnown RBP8.4□□□□□ -1.06
SHB17YKR043C YCR016WP25617 290 aaKnown RBP8.4□□□□□ -1.06
SHB17YKR043C AIM25P47140 327 aa8.4□□□□□ -1.06
SHB17YKR043C DUG3P53871 357 aa8.4□□□□□ -1.06
SHB17YKR043C LSM7P53905 115 aaKnown RBP8.4□□□□□ -1.06
SHB17YKR043C YML018CQ03730 393 aa8.4□□□□□ -1.06
SHB17YKR043C YML108WQ03759 105 aa8.4□□□□□ -1.06
SHB17YKR043C TY1A-DR2Q03964 440 aaKnown RBP8.4□□□□□ -1.06
SHB17YKR043C ALG6Q12001 544 aaKnown RBP8.4□□□□□ -1.06
SHB17YKR043C HTZ1Q12692 134 aaKnown RBP8.4□□□□□ -1.06
SHB17YKR043C YLR365WQ7LIF2 110 aa8.4□□□□□ -1.06
SHB17YKR043C GPM1P00950 247 aaKnown RBP8.39□□□□□ -1.07
SHB17YKR043C PET54P10834 293 aa8.39□□□□□ -1.07
SHB17YKR043C CAP2P13517 287 aa8.39□□□□□ -1.07
SHB17YKR043C SEN2P16658 377 aa8.39□□□□□ -1.07
SHB17YKR043C GAR1P28007 205 aaKnown RBP8.39□□□□□ -1.07
SHB17YKR043C HYM1P32464 399 aa8.39□□□□□ -1.07
SHB17YKR043C FLO10P36170 1169 aa8.39□□□□□ -1.07
Retrieved 100 of 5,963 RNA–protein pairs in 56.5 ms