RNA–Protein interactions for RNA: YKL211C

TRP3, Transcript of Indole-3-glycerol-phosphate synthase, yeast

Gene TRP3, Length 1,455 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRP3	YKL211C	GPP1	P41277	250 aa	Known RBP	5	□□□□□ -1.61
TRP3	YKL211C	SMD3	P43321	101 aa	Known RBP	5	□□□□□ -1.61
TRP3	YKL211C	RMD9	P53140	646 aa	Known RBP	5	□□□□□ -1.61
TRP3	YKL211C	TGL2	P54857	326 aa		5	□□□□□ -1.61
TRP3	YKL211C	YDR366C	P87287	132 aa		5	□□□□□ -1.61
TRP3	YKL211C	XYL2	Q07993	356 aa		5	□□□□□ -1.61
TRP3	YKL211C	TAD3	Q9URQ3	322 aa		5	□□□□□ -1.61
TRP3	YKL211C	COX5B	P00425	151 aa		4.99	□□□□□ -1.61
TRP3	YKL211C	ADE8	P04161	214 aa		4.99	□□□□□ -1.61
TRP3	YKL211C	ERG3	P32353	365 aa		4.99	□□□□□ -1.61
TRP3	YKL211C	FMP10	P40098	244 aa		4.99	□□□□□ -1.61
TRP3	YKL211C	TOS2	P50078	622 aa		4.99	□□□□□ -1.61
TRP3	YKL211C	OGG1	P53397	376 aa	Predicted RBP	4.99	□□□□□ -1.61
TRP3	YKL211C	APS2	Q00381	147 aa		4.99	□□□□□ -1.61
TRP3	YKL211C	DAL4	Q04895	635 aa		4.99	□□□□□ -1.61
TRP3	YKL211C	SRL2	Q12020	392 aa		4.99	□□□□□ -1.61
TRP3	YKL211C	YOR015W	Q12169	119 aa		4.99	□□□□□ -1.61
TRP3	YKL211C	SUL2	Q12325	893 aa		4.99	□□□□□ -1.61
TRP3	YKL211C	YDR262W	Q12331	272 aa		4.99	□□□□□ -1.61
TRP3	YKL211C	ATG5	Q12380	294 aa		4.99	□□□□□ -1.61
TRP3	YKL211C	RPS21B	Q3E754	87 aa	Known RBP	4.99	□□□□□ -1.61
TRP3	YKL211C	MSB2	P32334	1306 aa		4.98	□□□□□ -1.61
TRP3	YKL211C	YMR084W	A2P2R3	262 aa		4.98	□□□□□ -1.61
TRP3	YKL211C	GDH1	P07262	454 aa	Known RBP	4.98	□□□□□ -1.61
TRP3	YKL211C	MET3	P08536	511 aa		4.98	□□□□□ -1.61
TRP3	YKL211C	RPS25B	P0C0T4	108 aa	Known RBP	4.98	□□□□□ -1.61
TRP3	YKL211C	RFA1	P22336	621 aa	Known RBP	4.98	□□□□□ -1.61
TRP3	YKL211C	MGM101	P32787	269 aa	Known RBP	4.98	□□□□□ -1.61
TRP3	YKL211C	SLC1	P33333	303 aa		4.98	□□□□□ -1.61
TRP3	YKL211C	YGR149W	P48236	432 aa		4.98	□□□□□ -1.61
TRP3	YKL211C	ERG25	P53045	309 aa		4.98	□□□□□ -1.61
TRP3	YKL211C	YLR152C	P54072	576 aa		4.98	□□□□□ -1.61
TRP3	YKL211C	BUD25	P85052	153 aa		4.98	□□□□□ -1.61
TRP3	YKL211C	YPL067C	Q02754	198 aa		4.98	□□□□□ -1.61
TRP3	YKL211C	STD1	Q02794	444 aa		4.98	□□□□□ -1.61
TRP3	YKL211C	EKI1	Q03764	534 aa		4.98	□□□□□ -1.61
TRP3	YKL211C	MRPL51	Q06090	140 aa	Predicted RBP	4.98	□□□□□ -1.61
TRP3	YKL211C	FCY22	Q12119	530 aa		4.98	□□□□□ -1.61
TRP3	YKL211C	RAX2	Q12465	1220 aa		4.98	□□□□□ -1.61
TRP3	YKL211C	RPS25A	Q3E792	108 aa	Predicted RBP	4.98	□□□□□ -1.61
TRP3	YKL211C	BGL2	P15703	313 aa	Known RBP	4.97	□□□□□ -1.61
TRP3	YKL211C	OLE1	P21147	510 aa	Known RBP	4.97	□□□□□ -1.61
TRP3	YKL211C	RFA2	P26754	273 aa	Known RBP	4.97	□□□□□ -1.61
TRP3	YKL211C	RFA3	P26755	122 aa	Known RBP	4.97	□□□□□ -1.61
TRP3	YKL211C	AFG1	P32317	509 aa		4.97	□□□□□ -1.61
TRP3	YKL211C	PMU1	P36069	295 aa		4.97	□□□□□ -1.61
TRP3	YKL211C	YKL071W	P36086	256 aa		4.97	□□□□□ -1.61
TRP3	YKL211C	ECM34	P38728	170 aa		4.97	□□□□□ -1.61
TRP3	YKL211C	HEM14	P40012	539 aa		4.97	□□□□□ -1.61
TRP3	YKL211C	AZF1	P41696	914 aa		4.97	□□□□□ -1.61
TRP3	YKL211C	ASK10	P48361	1146 aa		4.97	□□□□□ -1.61
TRP3	YKL211C	YAP1802	P53309	568 aa		4.97	□□□□□ -1.61
TRP3	YKL211C	PAU4	P53427	120 aa		4.97	□□□□□ -1.61
TRP3	YKL211C	ALG9	P53868	555 aa	Known RBP	4.97	□□□□□ -1.61
TRP3	YKL211C	DIG2	Q03373	323 aa	Known RBP	4.97	□□□□□ -1.61
TRP3	YKL211C	TMN2	Q04562	672 aa		4.97	□□□□□ -1.61
TRP3	YKL211C	MRX8	Q05473	314 aa		4.97	□□□□□ -1.61
TRP3	YKL211C	YFT2	Q06676	274 aa		4.97	□□□□□ -1.61
TRP3	YKL211C	PAU23	Q07987	124 aa		4.97	□□□□□ -1.61
TRP3	YKL211C	YOR387C	Q08910	206 aa		4.97	□□□□□ -1.61
TRP3	YKL211C	MCT1	Q12283	360 aa		4.97	□□□□□ -1.61
TRP3	YKL211C	PAU17	Q12370	124 aa		4.97	□□□□□ -1.61
TRP3	YKL211C	PAU1	P0CE88	120 aa		4.96	□□□□□ -1.62
TRP3	YKL211C	PAU14	P0CE89	120 aa		4.96	□□□□□ -1.62
TRP3	YKL211C	PAU6	P0CE90	120 aa		4.96	□□□□□ -1.62
TRP3	YKL211C	PAU18	P0CE91	120 aa		4.96	□□□□□ -1.62
TRP3	YKL211C	PAU8	P0CE92	120 aa		4.96	□□□□□ -1.62
TRP3	YKL211C	PAU11	P0CE93	120 aa		4.96	□□□□□ -1.62
TRP3	YKL211C	ARF2	P19146	181 aa	Known RBP	4.96	□□□□□ -1.62
TRP3	YKL211C	MDH3	P32419	343 aa	Known RBP RIP-Chip data	4.96	□□□□□ -1.62	not detected
TRP3	YKL211C	DAL3	P32459	195 aa		4.96	□□□□□ -1.62
TRP3	YKL211C	TIM12	P32830	109 aa		4.96	□□□□□ -1.62
TRP3	YKL211C	MDL1	P33310	695 aa		4.96	□□□□□ -1.62
TRP3	YKL211C	MIX23	P38162	196 aa		4.96	□□□□□ -1.62
TRP3	YKL211C	PAU13	P38725	120 aa		4.96	□□□□□ -1.62
TRP3	YKL211C	YEL057C	P39983	233 aa		4.96	□□□□□ -1.62
TRP3	YKL211C	ATG27	P46989	271 aa		4.96	□□□□□ -1.62
TRP3	YKL211C	RIB4	P50861	169 aa	Predicted RBP	4.96	□□□□□ -1.62
TRP3	YKL211C	CDH1	P53197	566 aa		4.96	□□□□□ -1.62
TRP3	YKL211C	YGR151C	P53287	111 aa		4.96	□□□□□ -1.62
TRP3	YKL211C	SSU72	P53538	206 aa	Predicted RBP	4.96	□□□□□ -1.62
TRP3	YKL211C	TEX1	P53851	422 aa	Known RBP	4.96	□□□□□ -1.62
TRP3	YKL211C	HHT1	P61830	136 aa		4.96	□□□□□ -1.62
TRP3	YKL211C	YPL014W	Q02606	381 aa		4.96	□□□□□ -1.62
TRP3	YKL211C	VPS28	Q02767	242 aa		4.96	□□□□□ -1.62
TRP3	YKL211C	PAU10	Q03050	120 aa		4.96	□□□□□ -1.62
TRP3	YKL211C	FSH2	Q05015	223 aa		4.96	□□□□□ -1.62
TRP3	YKL211C	MCH1	Q07376	486 aa		4.96	□□□□□ -1.62
TRP3	YKL211C	PAU20	Q08322	120 aa		4.96	□□□□□ -1.62
TRP3	YKL211C	SME1	Q12330	94 aa	Predicted RBP	4.96	□□□□□ -1.62
TRP3	YKL211C	PAU9	Q3E770	120 aa		4.96	□□□□□ -1.62
TRP3	YKL211C	YSR3	P23501	404 aa		4.95	□□□□□ -1.62
TRP3	YKL211C	PRE2	P30656	287 aa	Known RBP	4.95	□□□□□ -1.62
TRP3	YKL211C	TRS65	P32893	560 aa		4.95	□□□□□ -1.62
TRP3	YKL211C	UPS2	P35200	230 aa		4.95	□□□□□ -1.62
TRP3	YKL211C	SSH1	P38353	490 aa	Known RBP	4.95	□□□□□ -1.62
TRP3	YKL211C	RPB11	P38902	120 aa		4.95	□□□□□ -1.62
TRP3	YKL211C	PAC2	P39937	518 aa		4.95	□□□□□ -1.62
TRP3	YKL211C	XBP1	P40489	647 aa		4.95	□□□□□ -1.62
TRP3	YKL211C	YFR020W	P43600	232 aa		4.95	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 24.3 ms